Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G43090.1
CDS Infomation	\| Pectin lyase-like superfamily protein \| Chr1:16217197-16219150 REVERSE LENGTH=1335 \| 201606
Sequence	ATGGTCTCCATCGCTTCTACGTTTAAAGCTTTGTGTTTGTCTTTCTTGTTCATTGTTGTT GCAAGTCGTCCGACTATCAGACCAAAGGTTTTCAACGTCCGACGCTATGGTTCTAGACCA GACGGAAAAACTGATAATGCCAATGCATTCACAAGTGTATGGAAACATGCATGCACAAGG ATAAGTGGAAGTAGTAAAATCTACGTACCGAAAGGAACATTCTACCTCGGTGGTGTAGAG TTTGTGGGTCCATGCAAAAATCCTATTGAATTTGTCATCGATGGAACTTTATTGGCTCCT GCAAACCCTAGGGACATTAAGCAGGACACATGGATCAACTTCCGGTACATCAACAATCTC TCTATCTCCGGTTCCGGTACACTTGACGGCCAAGGAAAATACTCTTGGCCACTCAATGAC TGCCACAAAAACACCAATTGTCCTAAACTAGCTATGACTATGGGATTTGCATTCGTGAAC AACTCAAGAATCAAAGACATAACATCACTCAACAGCAAAATGGGACACTTTAACTTCTTC TCTGTCCATCGCTTCAACATTACCGGCGTCACTATAACAGCTCCCGGTGATAGCCCAAAT ACTGACGGTATCAAAATGGGTTCTTGTAGCAACATTCACATCTCAAACACAAACATCGGT ACCGGAGATGATTGTATTGCCATTCTCTCTGGGACCACTAACCTTGATATCTCTAACGTC AAGTGTGGTCCTGGACATGGGATCAGTGTTGGAAGCTTAGGGAAGAACAAAGACGAGAAA GACGTAAAGCACTTAACGGTAAGAGACACAGTTTTCAACGGCACAAGCGATGGTATTCGG ATCAAGACTTGGGAATCTTCGGCTTCAAAACTCGTAGTTTCTAACTTCATATACGAGAAT ATTCAGATGATTGACGTTGGAAAACCGATCAACATTGATCAGAAGTATTGCCCTCACCCA CCTTGTGAACATGAAAAAAAGGGTAAGTCTCACGTTCAGATCCAAGACATTAAGTTAAAA AACATATATGGAACGTCGAATAACATAGTGGCAGTGAATCTACAATGTAGCAAGAGCTTT CCGTGCAAGAATGTTGAACTAATTGATATTAACCTAAAGCATACTGGACTCGAGAAAGGT CATTCCACAGCGATGTGCGAGAATGTTGACGGTTCTGTACGTGGTAAGAATGGTTCCTCA ACATTGTCTAGATTGACTCAATGGTCCATCGAAAAAATAACCTTTTGGGTTATACATGAT ATTTTTAGTTACATATTATTGCCTAATTTTTGTATATATTTTATGTTTTATGTTCTTGTT TATATGATATCATGA

Peptide Sequence

PEP ID	AT1G43090.1
PEP Infomation	\| Pectin lyase-like superfamily protein \| Chr1:16217197-16219150 REVERSE LENGTH=444 \| 201606
Sequence	MVSIASTFKALCLSFLFIVVASRPTIRPKVFNVRRYGSRPDGKTDNANAFTSVWKHACTR ISGSSKIYVPKGTFYLGGVEFVGPCKNPIEFVIDGTLLAPANPRDIKQDTWINFRYINNL SISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFF SVHRFNITGVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNV KCGPGHGISVGSLGKNKDEKDVKHLTVRDTVFNGTSDGIRIKTWESSASKLVVSNFIYEN IQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSF PCKNVELIDINLKHTGLEKGHSTAMCENVDGSVRGKNGSSTLSRLTQWSIEKITFWVIHD IFSYILLPNFCIYFMFYVLVYMIS

Transcript Sequence

Transcript ID	AT1G43090.1
Transcript Infomation	\| Pectin lyase-like superfamily protein \| Chr1:16217197-16219150 REVERSE LENGTH=1335 \| 201606
Sequence	ATGGTCTCCATCGCTTCTACGTTTAAAGCTTTGTGTTTGTCTTTCTTGTTCATTGTTGTT GCAAGTCGTCCGACTATCAGACCAAAGGTTTTCAACGTCCGACGCTATGGTTCTAGACCA GACGGAAAAACTGATAATGCCAATGCATTCACAAGTGTATGGAAACATGCATGCACAAGG ATAAGTGGAAGTAGTAAAATCTACGTACCGAAAGGAACATTCTACCTCGGTGGTGTAGAG TTTGTGGGTCCATGCAAAAATCCTATTGAATTTGTCATCGATGGAACTTTATTGGCTCCT GCAAACCCTAGGGACATTAAGCAGGACACATGGATCAACTTCCGGTACATCAACAATCTC TCTATCTCCGGTTCCGGTACACTTGACGGCCAAGGAAAATACTCTTGGCCACTCAATGAC TGCCACAAAAACACCAATTGTCCTAAACTAGCTATGACTATGGGATTTGCATTCGTGAAC AACTCAAGAATCAAAGACATAACATCACTCAACAGCAAAATGGGACACTTTAACTTCTTC TCTGTCCATCGCTTCAACATTACCGGCGTCACTATAACAGCTCCCGGTGATAGCCCAAAT ACTGACGGTATCAAAATGGGTTCTTGTAGCAACATTCACATCTCAAACACAAACATCGGT ACCGGAGATGATTGTATTGCCATTCTCTCTGGGACCACTAACCTTGATATCTCTAACGTC AAGTGTGGTCCTGGACATGGGATCAGTGTTGGAAGCTTAGGGAAGAACAAAGACGAGAAA GACGTAAAGCACTTAACGGTAAGAGACACAGTTTTCAACGGCACAAGCGATGGTATTCGG ATCAAGACTTGGGAATCTTCGGCTTCAAAACTCGTAGTTTCTAACTTCATATACGAGAAT ATTCAGATGATTGACGTTGGAAAACCGATCAACATTGATCAGAAGTATTGCCCTCACCCA CCTTGTGAACATGAAAAAAAGGGTAAGTCTCACGTTCAGATCCAAGACATTAAGTTAAAA AACATATATGGAACGTCGAATAACATAGTGGCAGTGAATCTACAATGTAGCAAGAGCTTT CCGTGCAAGAATGTTGAACTAATTGATATTAACCTAAAGCATACTGGACTCGAGAAAGGT CATTCCACAGCGATGTGCGAGAATGTTGACGGTTCTGTACGTGGTAAGAATGGTTCCTCA ACATTGTCTAGATTGACTCAATGGTCCATCGAAAAAATAACCTTTTGGGTTATACATGAT ATTTTTAGTTACATATTATTGCCTAATTTTTGTATATATTTTATGTTTTATGTTCTTGTT TATATGATATCATGA