Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G33980.2
CDS Infomation	\| Smg-4/UPF3 family protein \| Chr1:12351719-12354401 FORWARD LENGTH=1455 \| 201606
Sequence	ATGAAGGAACCTTTGCAGAAGAAGAAGGTGGTTGTTCGTCACTTGCCGCCTTCTCTTTCA CAGTCCGATCTCTTATCTCAAATTGATCCTCGTTTCGCTGATCGTTACAATTGGGTTTCG TTTCGTCCTGGGAAGTCCAGGTTAGGCTATAAAAATCAGAAGTATTCACGGGCCTATGTA AGTTTCAAGGCACCAGAAGATGTTTATGAGTTCGCTGCATTTTTCAACGGGCATGTGTTT GTTAATGAAAAGGGTGCTCAGTTTAAGGCTATAGTTGAATATGCACCTTCTCAGCGTGTT CCGAAACCGAGTGATAAGAAAGATCCTCGTGAAGGGTCTATTAGTAAAGATCCTGATTAT CTTGAGTTTCTTAAGGTGATTGCACAACCTGTTGAGAATCTTCCTAGTGCTGAAATCCAG TTGGAAAGAAGAGAAGCTGAGCAGTCTGGTGCTTCAAAAGCGGCTCCCATTGTTACACCT CTTATGGAATTCATACGTCAAAAACGTGCCACTGTGATGGGACCCCAGGGTTTATCTGAT ATTCGAAGAGGAGGTAGAAGAACCAGAGTAGTCTCTGCAAACAAGCCGAGTCCAAGGCCC TCGAAACGTAACTCTGAAAAGAAAAAGTATGTGGAAAAAGAAAGTTCAAAGAATGTGCCC CGGAAGACTACAGCAGACGTCAGCAGCTCTAAGCCAGATTATCGTCAGTCAAATTCAAGT GGAAAGGAACTACCAGGAAATGAAACTGCCGCTATCATTGATAGCTCTCCCCCTGGGATA GCATTGACTATGGATTCTGGGAAGAAAAAGATTTTGCTCCTGAGATCAAAAGACCGAGAC AATCCTGATAACCCTCCACCACAACCGGAACAGCATATAGACACTAATCTTTCTAGAAAC TCCACGGATTCAAGACAAAACCAGAAGAGTGATGTTGGTGGGAGGTTGATCAAGGGAATA CTTCTGAGAAATGACTCTCGACCGAGCCAGTCTTCCACTTTTGTGCAGTCTGAGCAAAGA GTGGAACCCTCAGAAGCAGAAAACTACAAACGACCTTCTCGACCAGCCAACACTCGAGCA GGGAAAGATTATCATACTTCTGGTACCATCAGTGAGAAGCAAGAGAGGCGTACAAGAAAC AAGGATAGACCTGATCGTGTTATGTGGGCTCCTCGTCGTGATGGTAGTGAGGATCAACCA CTATCTTCAGCAGGAAACAATGGAGAAGTGAAAGACAGGATGTTCTCTCAAAGATCGGGA GAAGTGGTGAACTCCTCTGGTGGTCACACTCTTGAGAATGGTTCTGCCAGACATTCTAGT CGCCGTGTTGGAGGTCGCAATAGAAAAGAAGAGGTGGTGATTGGCGAGGGTAAAACCTCC CGGAGAGGAAGTGGTGGTGGTCCCAGTTCACATGAGAAGCAAATGTGGATCCAAAAACCA TCATCCGGTACTTGA

Peptide Sequence

PEP ID	AT1G33980.2
PEP Infomation	\| Smg-4/UPF3 family protein \| Chr1:12351719-12354401 FORWARD LENGTH=484 \| 201606
Sequence	MKEPLQKKKVVVRHLPPSLSQSDLLSQIDPRFADRYNWVSFRPGKSRLGYKNQKYSRAYV SFKAPEDVYEFAAFFNGHVFVNEKGAQFKAIVEYAPSQRVPKPSDKKDPREGSISKDPDY LEFLKVIAQPVENLPSAEIQLERREAEQSGASKAAPIVTPLMEFIRQKRATVMGPQGLSD IRRGGRRTRVVSANKPSPRPSKRNSEKKKYVEKESSKNVPRKTTADVSSSKPDYRQSNSS GKELPGNETAAIIDSSPPGIALTMDSGKKKILLLRSKDRDNPDNPPPQPEQHIDTNLSRN STDSRQNQKSDVGGRLIKGILLRNDSRPSQSSTFVQSEQRVEPSEAENYKRPSRPANTRA GKDYHTSGTISEKQERRTRNKDRPDRVMWAPRRDGSEDQPLSSAGNNGEVKDRMFSQRSG EVVNSSGGHTLENGSARHSSRRVGGRNRKEEVVIGEGKTSRRGSGGGPSSHEKQMWIQKP SSGT

Transcript Sequence

Transcript ID	AT1G33980.2
Transcript Infomation	\| Smg-4/UPF3 family protein \| Chr1:12351593-12355023 FORWARD LENGTH=2126 \| 201606
Sequence	GGGAAGAGAGGAAACAAAAATTAGGGCAAAATTAGCGTATTGATGTGTTTCACTTTTCTT CTTCTTCTTCTTCATCGTGTTCGTGTTTGATTTGCGACTTTCTCCAAGGAAAATTTAGGG TTTTCGATGAAGGAACCTTTGCAGAAGAAGAAGGTGGTTGTTCGTCACTTGCCGCCTTCT CTTTCACAGTCCGATCTCTTATCTCAAATTGATCCTCGTTTCGCTGATCGTTACAATTGG GTTTCGTTTCGTCCTGGGAAGTCCAGGTTAGGCTATAAAAATCAGAAGTATTCACGGGCC TATGTAAGTTTCAAGGCACCAGAAGATGTTTATGAGTTCGCTGCATTTTTCAACGGGCAT GTGTTTGTTAATGAAAAGGGTGCTCAGTTTAAGGCTATAGTTGAATATGCACCTTCTCAG CGTGTTCCGAAACCGAGTGATAAGAAAGATCCTCGTGAAGGGTCTATTAGTAAAGATCCT GATTATCTTGAGTTTCTTAAGGTGATTGCACAACCTGTTGAGAATCTTCCTAGTGCTGAA ATCCAGTTGGAAAGAAGAGAAGCTGAGCAGTCTGGTGCTTCAAAAGCGGCTCCCATTGTT ACACCTCTTATGGAATTCATACGTCAAAAACGTGCCACTGTGATGGGACCCCAGGGTTTA TCTGATATTCGAAGAGGAGGTAGAAGAACCAGAGTAGTCTCTGCAAACAAGCCGAGTCCA AGGCCCTCGAAACGTAACTCTGAAAAGAAAAAGTATGTGGAAAAAGAAAGTTCAAAGAAT GTGCCCCGGAAGACTACAGCAGACGTCAGCAGCTCTAAGCCAGATTATCGTCAGTCAAAT TCAAGTGGAAAGGAACTACCAGGAAATGAAACTGCCGCTATCATTGATAGCTCTCCCCCT GGGATAGCATTGACTATGGATTCTGGGAAGAAAAAGATTTTGCTCCTGAGATCAAAAGAC CGAGACAATCCTGATAACCCTCCACCACAACCGGAACAGCATATAGACACTAATCTTTCT AGAAACTCCACGGATTCAAGACAAAACCAGAAGAGTGATGTTGGTGGGAGGTTGATCAAG GGAATACTTCTGAGAAATGACTCTCGACCGAGCCAGTCTTCCACTTTTGTGCAGTCTGAG CAAAGAGTGGAACCCTCAGAAGCAGAAAACTACAAACGACCTTCTCGACCAGCCAACACT CGAGCAGGGAAAGATTATCATACTTCTGGTACCATCAGTGAGAAGCAAGAGAGGCGTACA AGAAACAAGGATAGACCTGATCGTGTTATGTGGGCTCCTCGTCGTGATGGTAGTGAGGAT CAACCACTATCTTCAGCAGGAAACAATGGAGAAGTGAAAGACAGGATGTTCTCTCAAAGA TCGGGAGAAGTGGTGAACTCCTCTGGTGGTCACACTCTTGAGAATGGTTCTGCCAGACAT TCTAGTCGCCGTGTTGGAGGTCGCAATAGAAAAGAAGAGGTGGTGATTGGCGAGGGTAAA ACCTCCCGGAGAGGAAGTGGTGGTGGTCCCAGTTCACATGAGAAGCAAATGTGGATCCAA AAACCATCATCCGGTACTTGATATATTCTCTTAACATATGGCTAAATATATGAGCCATTC CACTGGATTTTGTCCTTCAATGGGAATCTATAGATCTCAATCGAAATGGGGAAGTAACAT TATCAACATCACTTGGGTTTTGGAGACTTTTGGTCCAACGTTGTAAGTCGTAGTATTGCA CATAAAAGAGGCCGTTCTCAAAGTTAGGAATCAGCTCAAGATTTATGAGAAGTGAGATAA GAAAAACTCGTTTGCTACTGCCTTTTGAAGGCCCTAGCGGTTCACGGTACCTGCATCCCC CCTTTTGGCTTGTGCGGTGTCACAGACAAGTGAGTGAGAAGTGAGAACTTACTCTCGAGT CTGAGTAATGAAAATAAAGTCAAAAGTGTATAGGGAGCGGGAAGCACAGTGTGTCGGGTT TTATTTTGGGTTCCTGAGAGGCCTTAGAACTTGATTGCACGCTTTTAACCATATAAGAGT TTGATTACTTTGAAGTTAATTTCTTGCTAAGTAATATTTTCTTGTGGAAGTTAGTTTATT TTTTATATGATTAGTCTATTTGTACT