Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G27980.1
CDS Infomation	\| dihydrosphingosine phosphate lyase \| Chr1:9748812-9752618 FORWARD LENGTH=1635 \| 201606
Sequence	ATGGATTCTTTTTCATATTCTTCGATGAAATCCATGTTGATTCAAGCTCGTGGCTCGTTG AACTCGCGTTTGTCGGAGTTTGAGCCACTGGTTCTGCTATTGGTTCCGCTTGTCTCTCTG TTTCTCGCTCAGATTATCGGATCTGTGTTTGGCGTTGTTCACGAGAAAGGCCTCAAAGCT TGTCTTATTGGGTTTATCATGGGACTCCTCAAAATGATTCCTGGAGTTCAGAATTACATT GATGCTGAGAAACAAAAGGTTGTTGACCAATTACAATCTGGTAGCAGCTCTAAGAAAAAG AATAAGACTGAAGTATTGCCAGTAAAAGGTCTAGGAGTTGAAGTTTTAGAGAAAATGGAG AATGAGAAGAGGAATGATGCTATTTGGCAAGGAAAATGCTCTGGCACTGTATACATAGGT GGAGCCGAGTCTGAAGGACATTTTTCATTGATAAATCAAGCATGTTCAATGTTTGCGCAT ACCAATCCGTTGCATATAGACGTATTCCAGAGTGTGGTGCGGTTTGAGTCAGAAGTAGTC GCAATGACTGCTGCGTTACTTGGGAGTAAAGAAACGGCGTCAGGAGGTCAAATATGCGGA AACATGACGTCTGGAGGAACAGAAAGTATAGTGTTGGCTGTGAAGTCATCTCGTGACTAT ATGAAGTACAAGAAGGGAATCACACGGCCAGAAATGATTATACCTGAGTCGGGTCATTCG GCTTATGATAAGGCGGCCCAGTATTTTAAAATCAAGTTGTGGCGAGTTCCAGTTGACAAA GACTTCCGAGCTGATGTGAAGGCAACAAGGCGGCATATTAACAGAAACACCATCATGATT GTTGGATCAGCACCAGGATTCCCTCATGGCATCATTGATCCTATCGAGGAGCTTGGTCAA CTGGCTCTTAGCTATGGAATATGCTTTCATGTTGACCTTTGCCTTGGTGGTTTTGTGTTA CCTTTCGCTCGTAAACTTGGGTACCAGATCCCACCTTTTGATTTTTCTGTACAAGGAGTT ACTTCAATTTCTGTGGACGTGCATAAATATGGTTTGGCTCCTAAAGGAACTAGTACAGTT CTATATAGAAATCATGAGATCAGAAAGCACCAATTTGTTGCTGTAACTGAATGGTCAGGA GGTCTATACGTGTCTCCAACTATCGCTGGGAGTAGGCCTGGGTCTTTGGTAGCCGGTGCT TGGGCTGCAATGATGTCGCTCGGCGAAGAAGGTTACCTACAAAACACAAGTAAGATAATG GAAGCATCAAAGAGACTAGAAGAAGGAGTAAGAGAAATCCATGAACTATTCGTCATTGGA AAGCCAGATATGACAATCGTGGCTTTTGGTTCTAAAGCATTGGATATATTTGAAGTTAAT GACATCATGTCTTCTAAAGGTTGGCATTTGAATGCACTACAGAGACCCAACAGCATTCAT ATATGTATTACTCTTCAACACGTCCCTGTAGTCGATGACTTCCTTCGGGATCTGCGTGAA GCTGTGGAAACTGTAAAAGCAAACCCAGGACCGATCACGGGAGGCTTGGCTCCAATATAT GGAGCAGCAGGGAAGATGCCAGACCGAGGCATGGTGAATGAGCTTCTGGTTAGTTTCATG GACAGTCAATATTAA

Peptide Sequence

PEP ID	AT1G27980.1
PEP Infomation	\| dihydrosphingosine phosphate lyase \| Chr1:9748812-9752618 FORWARD LENGTH=544 \| 201606
Sequence	MDSFSYSSMKSMLIQARGSLNSRLSEFEPLVLLLVPLVSLFLAQIIGSVFGVVHEKGLKA CLIGFIMGLLKMIPGVQNYIDAEKQKVVDQLQSGSSSKKKNKTEVLPVKGLGVEVLEKME NEKRNDAIWQGKCSGTVYIGGAESEGHFSLINQACSMFAHTNPLHIDVFQSVVRFESEVV AMTAALLGSKETASGGQICGNMTSGGTESIVLAVKSSRDYMKYKKGITRPEMIIPESGHS AYDKAAQYFKIKLWRVPVDKDFRADVKATRRHINRNTIMIVGSAPGFPHGIIDPIEELGQ LALSYGICFHVDLCLGGFVLPFARKLGYQIPPFDFSVQGVTSISVDVHKYGLAPKGTSTV LYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLVAGAWAAMMSLGEEGYLQNTSKIM EASKRLEEGVREIHELFVIGKPDMTIVAFGSKALDIFEVNDIMSSKGWHLNALQRPNSIH ICITLQHVPVVDDFLRDLREAVETVKANPGPITGGLAPIYGAAGKMPDRGMVNELLVSFM DSQY

Transcript Sequence

Transcript ID	AT1G27980.1
Transcript Infomation	\| dihydrosphingosine phosphate lyase \| Chr1:9748506-9752769 FORWARD LENGTH=2092 \| 201606
Sequence	CTACGTTGATCTGCTTTGATTTTGATATAAGTTTTGGTTCCAATTAGATTTCGTGTAGTT TTCTTCACCCACCCACTACTATCAGACTATCAGAATCTGAAAGTAACCCACTTTAAAAAT TGACAACACACGCAACGAAACACAAAGCGCCAAAAATTAAGGAAAAAAAGGTTTGTCGTA ATCTGATACTATTCACGCGATGACCTCGTTTTTGATCATCTTTTCCTTTTCTATATTCTT TTCTCCTCTGTCCCAAACGATTCACTTTTCTCACCATCTCAATCTCCAGACCAAAAGAAA CAAAAAATGGATTCTTTTTCATATTCTTCGATGAAATCCATGTTGATTCAAGCTCGTGGC TCGTTGAACTCGCGTTTGTCGGAGTTTGAGCCACTGGTTCTGCTATTGGTTCCGCTTGTC TCTCTGTTTCTCGCTCAGATTATCGGATCTGTGTTTGGCGTTGTTCACGAGAAAGGCCTC AAAGCTTGTCTTATTGGGTTTATCATGGGACTCCTCAAAATGATTCCTGGAGTTCAGAAT TACATTGATGCTGAGAAACAAAAGGTTGTTGACCAATTACAATCTGGTAGCAGCTCTAAG AAAAAGAATAAGACTGAAGTATTGCCAGTAAAAGGTCTAGGAGTTGAAGTTTTAGAGAAA ATGGAGAATGAGAAGAGGAATGATGCTATTTGGCAAGGAAAATGCTCTGGCACTGTATAC ATAGGTGGAGCCGAGTCTGAAGGACATTTTTCATTGATAAATCAAGCATGTTCAATGTTT GCGCATACCAATCCGTTGCATATAGACGTATTCCAGAGTGTGGTGCGGTTTGAGTCAGAA GTAGTCGCAATGACTGCTGCGTTACTTGGGAGTAAAGAAACGGCGTCAGGAGGTCAAATA TGCGGAAACATGACGTCTGGAGGAACAGAAAGTATAGTGTTGGCTGTGAAGTCATCTCGT GACTATATGAAGTACAAGAAGGGAATCACACGGCCAGAAATGATTATACCTGAGTCGGGT CATTCGGCTTATGATAAGGCGGCCCAGTATTTTAAAATCAAGTTGTGGCGAGTTCCAGTT GACAAAGACTTCCGAGCTGATGTGAAGGCAACAAGGCGGCATATTAACAGAAACACCATC ATGATTGTTGGATCAGCACCAGGATTCCCTCATGGCATCATTGATCCTATCGAGGAGCTT GGTCAACTGGCTCTTAGCTATGGAATATGCTTTCATGTTGACCTTTGCCTTGGTGGTTTT GTGTTACCTTTCGCTCGTAAACTTGGGTACCAGATCCCACCTTTTGATTTTTCTGTACAA GGAGTTACTTCAATTTCTGTGGACGTGCATAAATATGGTTTGGCTCCTAAAGGAACTAGT ACAGTTCTATATAGAAATCATGAGATCAGAAAGCACCAATTTGTTGCTGTAACTGAATGG TCAGGAGGTCTATACGTGTCTCCAACTATCGCTGGGAGTAGGCCTGGGTCTTTGGTAGCC GGTGCTTGGGCTGCAATGATGTCGCTCGGCGAAGAAGGTTACCTACAAAACACAAGTAAG ATAATGGAAGCATCAAAGAGACTAGAAGAAGGAGTAAGAGAAATCCATGAACTATTCGTC ATTGGAAAGCCAGATATGACAATCGTGGCTTTTGGTTCTAAAGCATTGGATATATTTGAA GTTAATGACATCATGTCTTCTAAAGGTTGGCATTTGAATGCACTACAGAGACCCAACAGC ATTCATATATGTATTACTCTTCAACACGTCCCTGTAGTCGATGACTTCCTTCGGGATCTG CGTGAAGCTGTGGAAACTGTAAAAGCAAACCCAGGACCGATCACGGGAGGCTTGGCTCCA ATATATGGAGCAGCAGGGAAGATGCCAGACCGAGGCATGGTGAATGAGCTTCTGGTTAGT TTCATGGACAGTCAATATTAAGTTTCTTGAAGGTTAAAGCATCTAGTGGGTAAATTGATA TCACATTTCAGTTGGAGAAGCAAAACTTTGTATATTCACAACCACATTGTTTCGTTTGCC CTACTAATAAAATTTCATTACAATCTTCATAATAAACAACTCTTAGTTCGTT