Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G27880.1
CDS Infomation	\| DEAD/DEAH box RNA helicase family protein \| Chr1:9708940-9713901 FORWARD LENGTH=2736 \| 201606
Sequence	ATGGATTTCGATTCAGACTCCGATGGTTCTCATGTCTCCGCCACTCCTCCCCGAGACTCA TTTCCGTCATCGCCGCCGCAACTTCAGTCACCGGCTAAGCATGTGCCGCCGGTCTCCCGG AAAATGACGTCTTCTTCCTCTCGCTCGAAGCCCAAAGCACCTACACATCCGCCGCCAAAT CCCTCACAGGAAGCTCCAGTACCGTCTCCCTATCCTCCTCCTCCTCCTCCATCTCCACTA TTTACCAATCTCCCTTTCCGGATCTGCCAATCCCAACCCGCTAGGTTTTCTTCTTCCGTG TCGTCCTTCTCCAGACTCTGCAGCAGAGCTTCTTTTACATCTGTTGAGAAATTGAAATCG GACGGCGTCGATTTTGTGCCTGAGCCACCTCTGGTAGAAGTAATCGCTCCTCCAAAATCA GTTAGGAGAAAGCCTCCGAATCTCATCACCGATACTATAACTTCTCCTCCGGTGAAACCT ATGGTGTTTCGTAGCAACGGTAACGGCGAGGGTAATTTCGTGAAATTGAACTTAAATGGC AAGAGAGGGAAGAAGTTTCCCAGCAAATACAAGGGCGTCTCTAAATCTAGAAGCAGTTAC TCATTCAGAGGGAAGAGATACAAGAAGAAAGAAGCTGATGGTGATGGCGAATCATTGTTG GAGGAAGAGTCTGATTTACAGAAACAGATAGAAGACGAAGCTAATGGTTTTATTAGCTCT GTAGAGGATGCGATTCTTGCTGTGAAGACTGAGGCTTCTGATGAGAATCTAACGAAGCTG TTGAATTTAGTTTATGGTTATGATTCTTTTCGAGACGGACAGTTGCAGGCGATTAAGATG ATTCTTGGTGGGAGTTCAACGATGCTGGTATTGCCTACTGGTGCTGGTAAGTCTCTCTGC TACCAGATTCCGGCAATGATTCTTCCTGGAATCACGCTTGTAGTGAGTCCTTTGGTTTCG TTGATGATTGATCAGTTGAAGCATTTGCCTTCTATCATTAAGGGTGGTCTCTTGAGCAGT AGCCAGAGACCTGAGGAAGCAACGGAGACATTGCGGAAACTTAAAGAAGGCATAATAAAG GTTCTCTTTGTATCTCCTGAGAGACTTCTGAATGTAGAATTTTTGTCAATGTTTCGCATG TCTTTATCTGTGTCACTTGTCGTGGTTGATGAGGCACACTGCGTATCAGAATGGTCTCAT AACTTCCGTCCTTCATATATGAGACTCAAGGCATCAATGCTGTTTTCTGAACTCAAGGCA GAATGCATTCTCGCGATGACCGCAACTGCCACTACAATGACTCTTCAGGCTGTCATGTCT TCACTAGAGATACCGTCAACCAATCTTATTCAGAAGTCACAACTCAGAGACAATTTTGAG TTGTCTGTCTCATTGAGTGGAGCTAATAGAATGAAAGATCTATTGATTTTGATGGAGTCT CCTCCATATAAGGAGATTCGAAGCATCATTGTGTACTGCAAATTTCAGTATGAGACTGAC ATGATAAGCAAGTATTTACGCGATAACAACATCAATGCAAAGGGTTATCACAGTGGTCTT CCTGCGAAGGACCGTGTTCGCATACAGGAGTCATTTTGTTCCAACAAGATTAGAGTGGTT GTTGCAACTGTAGCATTCGGCATGGGACTTGACAAGGGAGATGTAGGAGCTGTAATACAC TTCAGCGTGCCAGGCAGTATGGAAGAATACGTTCAGGAAATTGGACGTGCTGGTCGCGAC GGGCGGTTGTCATATTGTCATCTCTTTTATGATAATGACACATATCTAAAGCTTCGGAGT CTTGCACACAGTGATGGTGTCGATGAATATGCAGTTGGAAAATTTCTCACCCATGTATTT TCCACTGAGACAAAGCAACACGAGAAGATATGCTCGCTAGTCATTGAATCTGCCTCTCAA AAATTTGACATGAAGGAAGAGGTTATGCAAACGATTTTGACACATTTGGAGCTGGGGGAA GTGCAATACCTACGTATGCTTCCACAACTCAACATATGTTGCACTTTGAATTTCCACAAG TCTTCTCCAAACACTCTTGCTGCACGAAGTGCCATAGTTGCAGCAATTTTGAAGAAGTCT CACGTGAAGCAAGGGTTACATGTCTTTGATATACCAGCTGTGGCCTCTAGCATATGTGTT GCAACAACAGATGTCTTGGCTGAGATTCAAGCTCTGAAGATGAAGGGGGAAGTAACATAC GAATTGAAGGACTCCGCCTTTTGTTACACAATCTTAAAATCTCCAAAGGAAATATGTTCA TTGTCCAGTCATCTAACCAAGTGGCTCACAGAGATTGAAAGTTGCAAAGTGAGAAAACTG GATATTATGTCTAGTGCAGCTGTGGCTGCGATTAGTGTCTCTAACACTTCAGAACTGAGT TCTGGTGCCAAGCAAACTCGGAGCCTGCAAAGCAGAATCTTTGATTACTTCAATGGTGAT GAAAAGTGTGACAGTCCGAGCAAGGCTACTCAAAATTGCGCCTTTCTACGAGCAGACATA AAGGTGTTTTTGCAGAGTAATCGCCAAGCCAAATTCACACCAAGAGCCATCGCGAGAATA ATGCACGGAGTTGGAAGTCCAGCTTTTCCGAATTCAGTCTGGTCCAAGACTCATTTCTGG GGAAGGTATATGAACGTAGACTTCCGAGTGATAATGGAAGCGGCACAAACAGAGTTGTTC AATTTTGTTGACAGGAACGCAGCTTTAGCTACATAA

Peptide Sequence

PEP ID	AT1G27880.1
PEP Infomation	\| DEAD/DEAH box RNA helicase family protein \| Chr1:9708940-9713901 FORWARD LENGTH=911 \| 201606
Sequence	MDFDSDSDGSHVSATPPRDSFPSSPPQLQSPAKHVPPVSRKMTSSSSRSKPKAPTHPPPN PSQEAPVPSPYPPPPPPSPLFTNLPFRICQSQPARFSSSVSSFSRLCSRASFTSVEKLKS DGVDFVPEPPLVEVIAPPKSVRRKPPNLITDTITSPPVKPMVFRSNGNGEGNFVKLNLNG KRGKKFPSKYKGVSKSRSSYSFRGKRYKKKEADGDGESLLEEESDLQKQIEDEANGFISS VEDAILAVKTEASDENLTKLLNLVYGYDSFRDGQLQAIKMILGGSSTMLVLPTGAGKSLC YQIPAMILPGITLVVSPLVSLMIDQLKHLPSIIKGGLLSSSQRPEEATETLRKLKEGIIK VLFVSPERLLNVEFLSMFRMSLSVSLVVVDEAHCVSEWSHNFRPSYMRLKASMLFSELKA ECILAMTATATTMTLQAVMSSLEIPSTNLIQKSQLRDNFELSVSLSGANRMKDLLILMES PPYKEIRSIIVYCKFQYETDMISKYLRDNNINAKGYHSGLPAKDRVRIQESFCSNKIRVV VATVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRS LAHSDGVDEYAVGKFLTHVFSTETKQHEKICSLVIESASQKFDMKEEVMQTILTHLELGE VQYLRMLPQLNICCTLNFHKSSPNTLAARSAIVAAILKKSHVKQGLHVFDIPAVASSICV ATTDVLAEIQALKMKGEVTYELKDSAFCYTILKSPKEICSLSSHLTKWLTEIESCKVRKL DIMSSAAVAAISVSNTSELSSGAKQTRSLQSRIFDYFNGDEKCDSPSKATQNCAFLRADI KVFLQSNRQAKFTPRAIARIMHGVGSPAFPNSVWSKTHFWGRYMNVDFRVIMEAAQTELF NFVDRNAALAT

Transcript Sequence

Transcript ID	AT1G27880.1
Transcript Infomation	\| DEAD/DEAH box RNA helicase family protein \| Chr1:9708861-9714366 FORWARD LENGTH=3280 \| 201606
Sequence	GGGAAGACGAGAAAGAGCGGCTTGGACCTTAAAAAAAACCAAATTCTCACTAAATGATTC CGTAAAATAAAATTCTCCGATGGATTTCGATTCAGACTCCGATGGTTCTCATGTCTCCGC CACTCCTCCCCGAGACTCATTTCCGTCATCGCCGCCGCAACTTCAGTCACCGGCTAAGCA TGTGCCGCCGGTCTCCCGGAAAATGACGTCTTCTTCCTCTCGCTCGAAGCCCAAAGCACC TACACATCCGCCGCCAAATCCCTCACAGGAAGCTCCAGTACCGTCTCCCTATCCTCCTCC TCCTCCTCCATCTCCACTATTTACCAATCTCCCTTTCCGGATCTGCCAATCCCAACCCGC TAGGTTTTCTTCTTCCGTGTCGTCCTTCTCCAGACTCTGCAGCAGAGCTTCTTTTACATC TGTTGAGAAATTGAAATCGGACGGCGTCGATTTTGTGCCTGAGCCACCTCTGGTAGAAGT AATCGCTCCTCCAAAATCAGTTAGGAGAAAGCCTCCGAATCTCATCACCGATACTATAAC TTCTCCTCCGGTGAAACCTATGGTGTTTCGTAGCAACGGTAACGGCGAGGGTAATTTCGT GAAATTGAACTTAAATGGCAAGAGAGGGAAGAAGTTTCCCAGCAAATACAAGGGCGTCTC TAAATCTAGAAGCAGTTACTCATTCAGAGGGAAGAGATACAAGAAGAAAGAAGCTGATGG TGATGGCGAATCATTGTTGGAGGAAGAGTCTGATTTACAGAAACAGATAGAAGACGAAGC TAATGGTTTTATTAGCTCTGTAGAGGATGCGATTCTTGCTGTGAAGACTGAGGCTTCTGA TGAGAATCTAACGAAGCTGTTGAATTTAGTTTATGGTTATGATTCTTTTCGAGACGGACA GTTGCAGGCGATTAAGATGATTCTTGGTGGGAGTTCAACGATGCTGGTATTGCCTACTGG TGCTGGTAAGTCTCTCTGCTACCAGATTCCGGCAATGATTCTTCCTGGAATCACGCTTGT AGTGAGTCCTTTGGTTTCGTTGATGATTGATCAGTTGAAGCATTTGCCTTCTATCATTAA GGGTGGTCTCTTGAGCAGTAGCCAGAGACCTGAGGAAGCAACGGAGACATTGCGGAAACT TAAAGAAGGCATAATAAAGGTTCTCTTTGTATCTCCTGAGAGACTTCTGAATGTAGAATT TTTGTCAATGTTTCGCATGTCTTTATCTGTGTCACTTGTCGTGGTTGATGAGGCACACTG CGTATCAGAATGGTCTCATAACTTCCGTCCTTCATATATGAGACTCAAGGCATCAATGCT GTTTTCTGAACTCAAGGCAGAATGCATTCTCGCGATGACCGCAACTGCCACTACAATGAC TCTTCAGGCTGTCATGTCTTCACTAGAGATACCGTCAACCAATCTTATTCAGAAGTCACA ACTCAGAGACAATTTTGAGTTGTCTGTCTCATTGAGTGGAGCTAATAGAATGAAAGATCT ATTGATTTTGATGGAGTCTCCTCCATATAAGGAGATTCGAAGCATCATTGTGTACTGCAA ATTTCAGTATGAGACTGACATGATAAGCAAGTATTTACGCGATAACAACATCAATGCAAA GGGTTATCACAGTGGTCTTCCTGCGAAGGACCGTGTTCGCATACAGGAGTCATTTTGTTC CAACAAGATTAGAGTGGTTGTTGCAACTGTAGCATTCGGCATGGGACTTGACAAGGGAGA TGTAGGAGCTGTAATACACTTCAGCGTGCCAGGCAGTATGGAAGAATACGTTCAGGAAAT TGGACGTGCTGGTCGCGACGGGCGGTTGTCATATTGTCATCTCTTTTATGATAATGACAC ATATCTAAAGCTTCGGAGTCTTGCACACAGTGATGGTGTCGATGAATATGCAGTTGGAAA ATTTCTCACCCATGTATTTTCCACTGAGACAAAGCAACACGAGAAGATATGCTCGCTAGT CATTGAATCTGCCTCTCAAAAATTTGACATGAAGGAAGAGGTTATGCAAACGATTTTGAC ACATTTGGAGCTGGGGGAAGTGCAATACCTACGTATGCTTCCACAACTCAACATATGTTG CACTTTGAATTTCCACAAGTCTTCTCCAAACACTCTTGCTGCACGAAGTGCCATAGTTGC AGCAATTTTGAAGAAGTCTCACGTGAAGCAAGGGTTACATGTCTTTGATATACCAGCTGT GGCCTCTAGCATATGTGTTGCAACAACAGATGTCTTGGCTGAGATTCAAGCTCTGAAGAT GAAGGGGGAAGTAACATACGAATTGAAGGACTCCGCCTTTTGTTACACAATCTTAAAATC TCCAAAGGAAATATGTTCATTGTCCAGTCATCTAACCAAGTGGCTCACAGAGATTGAAAG TTGCAAAGTGAGAAAACTGGATATTATGTCTAGTGCAGCTGTGGCTGCGATTAGTGTCTC TAACACTTCAGAACTGAGTTCTGGTGCCAAGCAAACTCGGAGCCTGCAAAGCAGAATCTT TGATTACTTCAATGGTGATGAAAAGTGTGACAGTCCGAGCAAGGCTACTCAAAATTGCGC CTTTCTACGAGCAGACATAAAGGTGTTTTTGCAGAGTAATCGCCAAGCCAAATTCACACC AAGAGCCATCGCGAGAATAATGCACGGAGTTGGAAGTCCAGCTTTTCCGAATTCAGTCTG GTCCAAGACTCATTTCTGGGGAAGGTATATGAACGTAGACTTCCGAGTGATAATGGAAGC GGCACAAACAGAGTTGTTCAATTTTGTTGACAGGAACGCAGCTTTAGCTACATAACATAA GATTAGAGGCTTTGAGTAGATTCTTAGGATATTTAAATTTATTTGTATTGTATTCTAGAT TCATTGAAAGTATCCAGTAAAGAGAAATTGTGTCATATGAGAGTTGAGAGAATTGTTTTG ATCGACAAGAAAAGATGAAAGTTAATCTTTAGTATTTAAAGAAACATCTGATAAAACTAG AAATTATACATAATAGCAGAGCAAGTCATGTTAAACAAACATTCAGGCATCACAAAACGT AGTTCCTTCCTTGGACCGGCATCCCAAAGTAACCACCACCAAAATACGGGTTCGGGTGAT GAGCAGCAAACATCACCGATCTCGGTCTCGGTATAGGTATCGGTATTGGGATGTAACATC TAGTCATCATAAGCTGCTGCTGCTCTAGTTGATATTGCTGATGATCAACTCGTCTTACAC ACTGCTTTCTACTATTGAGCAAATCGAAAGTCAACTTAGT