Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Arabidopsis thaliana

CDS Sequence

CDS ID

AT1G27840.3
CDS Infomation

| Transducin/WD40 repeat-like superfamily protein | Chr1:9693332-9696257 REVERSE LENGTH=1356 | 201606
Sequence

ATGTGGGAGGCTATCAAAGACAGAGAAACCGGTCGAATTCGTTCCAATTCCTTCGCCAAT
CGATTCAAATCCCGCCGGATTTTGTCTCTCCAACTCTCTAATCGAAAAGACTTTGTTTCT
CCTCATCGTGGCTCCGTTAACTCCCTTCAGGTTGATTTGACGGAGGGGAGATATCTTCTC
TCTGGAGCAGCAGATGGTTCAGCTGCTGTATTTGATGTTCAACGGGCCACTGATTACGAG
GCAAGTGGTCTAATTGCCAAGCACAAGTGTATATTTACTGTCGACAAGCAACATGAAAAT
GGACATAAATATGCCATATCCTCTGCCATTTGGTATCCCATTGACACTGGGCTCTTCATT
ACAGGTTCTTTTGATCATTACTTAAAAGTCTGGGATACCAATACTGCTCAGGCGGTTGTG
GATTTTAAAATGCCTGGAAAGGTTTATAGAACTGCCATGTCTTCTATGGCAATGTCTCAC
ACGTTAATTGCTGCTGGAACTGAAGATGTCCAGGTTCGCCTCTGTGATATAGCTTCTGGG
GCATTCTCTCACACATTATCGGGTCACCGTGATGGCGTTATGTCAGTGGAATGGTCTACT
TCCAGCGAGTGGGTTTTGTATACTGGGGGTTGTGATGGTGCAATACGTTTCTGGGACATT
AGACGGGCTGGTTGTTTCCGTGTTCTAGATCAATCACAGACACAACTTGGGTTCCGACCA
CCAATTTTAAAGCGAACTGCGGTTGGCAGTAAGCTTTCTTCAGTTGCAAAATCTTCTTTG
GGGGGCCAAAATAGGTTGAAGACACTGCAGAGTAAACAAACTGGAAGCCAAAGTGTAAAG
GGATCATCTAGCGCTAAAGCTTCAGTGGAAAAGTCTCGACAGAAGAGAATTCACCCTGGA
ATGTTATCTACTCTAGATCGTGCTACGGCTCATTATGGTGCTGTTACTGGCTTAAAGGCA
ACTAACGATGGGATGTATCTTCTTAGTGCTGGGTCGGATTCAAGAATAAGATTGTGGGAT
ATTGAATCTGGACGCAACACCCTGGTGAACTTTGAAACTGGACGCATCCAGACTAACAAA
GGAATCCAATTAGATACAAGCGATGATCCAGCTCTGGTATTTGTTCCATGCATGAAGACT
GTGAAGGTAGCTTTTGGCATGTGGTCGGGTAGAACAACACTGATGCTTCGTGGACACTAC
GAAAGCGTGAACACTTGCTGCTTTAATTCCAATGATCAGGAACTATACACAAGTGGCTCA
GATAGACAAATACTTGTGTGGTCACCAGGCGGAACAGTGGAAGATGAAATGGTGCAAGAT
GAAGTAGCCGAAGATAAAGACAATTGGAGCGACTGA

Peptide Sequence

PEP ID

AT1G27840.3
PEP Infomation

| Transducin/WD40 repeat-like superfamily protein | Chr1:9693332-9696257 REVERSE LENGTH=451 | 201606
Sequence

MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL
SGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFI
TGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASG
AFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRP
PILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPG
MLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNK
GIQLDTSDDPALVFVPCMKTVKVAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGS
DRQILVWSPGGTVEDEMVQDEVAEDKDNWSD

Transcript Sequence

Transcript ID

AT1G27840.3
Transcript Infomation

| Transducin/WD40 repeat-like superfamily protein | Chr1:9693008-9696364 REVERSE LENGTH=1787 | 201606
Sequence

AGCTAAAGAAGATCAAAAACTTTTCTTAGGGCTTTGGAGATTCGAGCTCGAGTATTCATA
CAAGTCTGGTGATATCCACGAAAATCAGAAGACGAGATGCTAGGAGAATGTGGGAGGCTA
TCAAAGACAGAGAAACCGGTCGAATTCGTTCCAATTCCTTCGCCAATCGATTCAAATCCC
GCCGGATTTTGTCTCTCCAACTCTCTAATCGAAAAGACTTTGTTTCTCCTCATCGTGGCT
CCGTTAACTCCCTTCAGGTTGATTTGACGGAGGGGAGATATCTTCTCTCTGGAGCAGCAG
ATGGTTCAGCTGCTGTATTTGATGTTCAACGGGCCACTGATTACGAGGCAAGTGGTCTAA
TTGCCAAGCACAAGTGTATATTTACTGTCGACAAGCAACATGAAAATGGACATAAATATG
CCATATCCTCTGCCATTTGGTATCCCATTGACACTGGGCTCTTCATTACAGGTTCTTTTG
ATCATTACTTAAAAGTCTGGGATACCAATACTGCTCAGGCGGTTGTGGATTTTAAAATGC
CTGGAAAGGTTTATAGAACTGCCATGTCTTCTATGGCAATGTCTCACACGTTAATTGCTG
CTGGAACTGAAGATGTCCAGGTTCGCCTCTGTGATATAGCTTCTGGGGCATTCTCTCACA
CATTATCGGGTCACCGTGATGGCGTTATGTCAGTGGAATGGTCTACTTCCAGCGAGTGGG
TTTTGTATACTGGGGGTTGTGATGGTGCAATACGTTTCTGGGACATTAGACGGGCTGGTT
GTTTCCGTGTTCTAGATCAATCACAGACACAACTTGGGTTCCGACCACCAATTTTAAAGC
GAACTGCGGTTGGCAGTAAGCTTTCTTCAGTTGCAAAATCTTCTTTGGGGGGCCAAAATA
GGTTGAAGACACTGCAGAGTAAACAAACTGGAAGCCAAAGTGTAAAGGGATCATCTAGCG
CTAAAGCTTCAGTGGAAAAGTCTCGACAGAAGAGAATTCACCCTGGAATGTTATCTACTC
TAGATCGTGCTACGGCTCATTATGGTGCTGTTACTGGCTTAAAGGCAACTAACGATGGGA
TGTATCTTCTTAGTGCTGGGTCGGATTCAAGAATAAGATTGTGGGATATTGAATCTGGAC
GCAACACCCTGGTGAACTTTGAAACTGGACGCATCCAGACTAACAAAGGAATCCAATTAG
ATACAAGCGATGATCCAGCTCTGGTATTTGTTCCATGCATGAAGACTGTGAAGGTAGCTT
TTGGCATGTGGTCGGGTAGAACAACACTGATGCTTCGTGGACACTACGAAAGCGTGAACA
CTTGCTGCTTTAATTCCAATGATCAGGAACTATACACAAGTGGCTCAGATAGACAAATAC
TTGTGTGGTCACCAGGCGGAACAGTGGAAGATGAAATGGTGCAAGATGAAGTAGCCGAAG
ATAAAGACAATTGGAGCGACTGAGAAAACAAGTTTCGGGCAGTCTTCTTTCCCAATCTGT
GAATTTCCATGTGCGTTGTTCTGAGTATAGTTTTCACAAACTCGTATTACTATAGTCGGG
TTTTGATTGTTTATAAAGTAAAACTGAAATATTTGTCAGTTAATTAGAATTTAGTTCATA
CTACTAAAATGAAGATTAAACTCGTTCCGAGTCAATGCGAACCGAATAAACAACGATCGA
CTGTAAGACCAAAACGAATCTCTTTATTCGGCGAAGACCATAAATTTGTAACTAAAGATA
ACTACGTCAAAGTGTAAAAGTAAAATAATAAAAATCTATTTGAACAC