Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G24190.3
CDS Infomation	\| SIN3-like 3 \| Chr1:8563706-8569927 REVERSE LENGTH=4017 \| 201606
Sequence	ATGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAACGACGCTCTTGCATATCTTAAA GCCGTGAAGGACAAATTTCAGGATCAACGTGGAAAATATGACGAGTTTCTCGAGGTTATG AAGAATTTTAAATCTCAAAGAGTTGATACAGCTGGTGTGATAACTAGGGTAAAAGAACTT TTCAAAGGACACCAAGAGTTGATTTTGGGGTTTAATACTTTCTTGCCTAAGGGTTTTGAG ATCACACTTCAACCTGAGGATGGACAACCTCCACTGAAGAAACGTGTTGAGTTTGAGGAA GCTATTAGCTTTGTTAACAAGATTAAGACAAGGTTTCAGGGAGATGATCGTGTATACAAA TCATTTTTAGACATTTTAAACATGTACAGAAGGGATAGCAAGTCCATCACTGAGGTCTAC CAGGAGGTTGCGATCCTATTTCGGGATCATTCAGATCTGCTCGTGGAGTTTACTCACTTT CTACCTGATACTTCAGCAACGGCCTCTATTCCATCTGTTAAAACTTCAGTTCGTGAGAGA GGGGTTTCTCTGGCTGATAAGAAGGACCGGATCATTACTCCACATCCTGACCATGACTAT GGTACTGAACATATTGACCAGGACCGGGAGAGACCTATTAAGAAAGAAAATAAAGAACAC ATGAGAGGTACTAACAAAGAAAATGAGCATAGGGATGCCAGAGATTTCGAACCACATAGC AAAAAAGAGCAATTTCTCAACAAGAAGCAGAAACTACATATTAGAGGCGATGATCCTGCT GAAATTTCCAATCAAAGTAAACTTTCTGGAGCGGTTCCTAGTTCATCTACTTATGATGAA AAAGGTGCCATGAAAAGTTACAGTCAAGATCTAGCTATTGTCGATAGAGTAAAGGAAAAG CTTAACGCCTCAGAGTACCAGGAGTTTTTACGTTGTCTTAATCTCTTTTCAAAAGAGATA ATCAGCCGACCAGAACTGCAATCTTTGGTAGGGAATTTAATCGGAGTATATCCTGACCTC ATGGATTCCTTTATAGAGTTTTTGGTGCAATGTGAAAAGAATGAAGGACTGCTCTCTGGT ATTCTGACTAAGAAATCCTTGTGGAGTGAAGGCAAATATCCTCAACCGTCACTGGACAAT GATAGAGACCAGGAACATAAGAGAGATGACGGGCTTAGAGATAGAGATCATGAAAAGGAA AGGCTTGAAAAAGCAGCTGCAAATCTGAAATGGGCAAAGCCAATCAGTGAACTAGATCTC TCGAACTGTGAACAATGCACTCCTAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCT ATTGCAAGCCAGAAGACAGAGATCGGTAAACTGGTTCTTAATGATCACTGGGTCTCCGTC ACATCAGGAAGTGAAGATTATTCATTTAGCCACATGCGTAAGAACCAGTATGAAGAGAGC CTCTTCAAATGTGAGGATGACAGGTTTGAGCTGGACATGCTATTAGAGTCTGTAAATTCA ACGACAAAGCATGTGGAAGAATTATTGACAAAAATTAACAGTAATGAACTGAAAACCAAC AGTCCCATCCGTGTCGAGGATCACCTCACAGCTCTAAACTTAAGATGCATAGAACGGTTG TATGGTGATCACGGGCTCGATGTGATGGATGTGCTGAAGAAGAACGTGTCTCTTGCTTTA CCTGTTATCCTAACACGTTTGAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGAT TTTGACAAAGTCTGGGCTGAGATATATGCTAAGAATTACTACAAGTCGCTTGATCATCGA AGTTTCTACTTCAAACAGCAGGATTCAAAGAAGCTGAGCATGAAAGCATTGTTGGCAGAG ATAAAAGAGATTACTGAAAAGAAGCGAGAGGATGATTCACTTCTTGCATTTGCAGCCGGA AATAGACTATCCATTTCCCCAGATTTGGAGTTTGATTATCCGGATCATGACCTTCATGAA GATCTTTACCAGCTGATCAAATATTCGTGTGCAGAAATGTGCTCTACCGAACAGTTAGAT AAGGTAATGAAGATTTGGACAACTTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCT CAAGGTGCTGAAGACCAAGAAGACGTTGTCAAGTCCATGAACCAGAATGTAAAGAGCGGT AGTTCAAGTGCTGGCGAGAGTGAGGGAAGTCCTCACAATTACGCTAGTGTTGCCGACTCT AGACGCTCAAAGTCATCTCGAAAAGCTAATGAACATAGTCAGTTGGGGCAAACTAGTAAT TCGGAGAGGGATGGCGCCGCTGGTAGGACATCAGATGCCTTATGTGAGACTGCTCAGCAT GAGAAAATGCTGAAGAATGTAGTTACGTCTGATGAAAAGCCTGAAAGCAAGCAAGCTGTT TCTATTGAGCGTGCACACGATTCAACTGCTCTCGCTGTGGATGGATTATTAGATCAAAGT AATGGAGGAAGCAGTATAGTACACATGACCGGACATTGCAATAATAATCTGAAGCCTGTG ACCTGTGGAACAGAGTTGGAGTTGAAAATGAATGATGGTAATGGGCCAAAATTAGAGGTT GGTAACAAGAAGTTATTGACAAATGGGATCGCGGTAGAAATAACAAGTGACCAAGAGATG GCAGGAACATCCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTCCAAATGGAGACTTTGAG GAAGATAATTTTGCAGTTTATGCAAAAACTGATTTTGAGACCTTCAGCAAAGCGAATGAT AGTACTGGAAATAACATTAGCGGAGATAGAAGTAGAGAAGGGGAACCATCTTGTCTGGAG ACAAGGGCTGAGAATGACGCTGAAGGTGACGAAAACGCCGCAAGATCATCAGAGGACAGC AGAAATGAATATGAGAACGGTGATGTTTCTGGAACGGAATCTGGTGGTGGTGAAGATCCG GAGGATGATTTGGATAACAATAACAAAGGAGAAAGCGAAGGTGAGGCTGAATGTATGGCT GATGCACATGATGCTGAAGAAAATGGGTCTGCCTTACCCGTTTCAGCACGATTCTTGCTG CATGTAAAGCCCTTAGTAAAGTATGTTCCTTCAGCTATAGCTTTGCATGACAAGGACAAA GACTCTCTGAAGAACTCCCAAGTTTTCTATGGAAATGATTCGTTTTACGTGCTTTTCAGG CTGCACCGGATATTGTATGAGAGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAA GGAAAGTGGAGGACCTCAAATACCAAAAATCCTACTGATTCCTATGCTAGATTCATGACT GCACTCTACAACTTACTTGATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGA GCGATAATCGGGACTCAGTCTTATATTCTCTTCACATTGGACAAACTGATCCATAAATTC ATCAAGCATCTACAAGTAGTAGTAGCTGATGAGATGGACAACAAGCTTCTTCAGCTTTAT TTTTATGAGAAATCCAGAAGGCCTGAAACGATTTTTGATGCTGTGTATTACGATAATACC CGTGTCCTCCTCCCTGATGAGAATATTTACCGTATTGAATGTAGATTATCAACCCCAGCG AAACTCTCTATTCAGCTTATGTGCAACGGTCTTGATAAGCCCGATGTGACATCTGTATCC ATTGACCCGACCTTTGCAGCTTATCTCCACAATGACTTCCTCTCCATACAACCAAATGCA AGGGAGGATCGCAGAATCTATTTAAATAGGAACAAGCGCAAAGTTTGTCGTGAAGATGAA CAGTTATACAGCACAGATGAAGTTAAGATCAAAAATGGTTTGGAGTGTAAGATAGCTTGC GGTTCTTCAAAGGTCTCCTATGTACTAGAAACAGAAGATTTGTTGGTGCGAGTTAAAAAG AGAAGAAAAACTTTGTGCCACAATCAGGATTCTTGGAGACAAAACAAAAACAAAAGTGGC AATTCTCCATTGTTGACTTCACCGGATAGAGCCAAACTGCATTCTCTATCTTCATAA

Peptide Sequence

PEP ID	AT1G24190.3
PEP Infomation	\| SIN3-like 3 \| Chr1:8563706-8569927 REVERSE LENGTH=1338 \| 201606
Sequence	MVGGGSAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKEL FKGHQELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYK SFLDILNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASIPSVKTSVRER GVSLADKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHRDARDFEPHS KKEQFLNKKQKLHIRGDDPAEISNQSKLSGAVPSSSTYDEKGAMKSYSQDLAIVDRVKEK LNASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKNEGLLSG ILTKKSLWSEGKYPQPSLDNDRDQEHKRDDGLRDRDHEKERLEKAAANLKWAKPISELDL SNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEES LFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERL YGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHR SFYFKQQDSKKLSMKALLAEIKEITEKKREDDSLLAFAAGNRLSISPDLEFDYPDHDLHE DLYQLIKYSCAEMCSTEQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSMNQNVKSG SSSAGESEGSPHNYASVADSRRSKSSRKANEHSQLGQTSNSERDGAAGRTSDALCETAQH EKMLKNVVTSDEKPESKQAVSIERAHDSTALAVDGLLDQSNGGSSIVHMTGHCNNNLKPV TCGTELELKMNDGNGPKLEVGNKKLLTNGIAVEITSDQEMAGTSKVEREEGELSPNGDFE EDNFAVYAKTDFETFSKANDSTGNNISGDRSREGEPSCLETRAENDAEGDENAARSSEDS RNEYENGDVSGTESGGGEDPEDDLDNNNKGESEGEAECMADAHDAEENGSALPVSARFLL HVKPLVKYVPSAIALHDKDKDSLKNSQVFYGNDSFYVLFRLHRILYERILSAKVNSSSPE GKWRTSNTKNPTDSYARFMTALYNLLDGTSDNAKFEDDCRAIIGTQSYILFTLDKLIHKF IKHLQVVVADEMDNKLLQLYFYEKSRRPETIFDAVYYDNTRVLLPDENIYRIECRLSTPA KLSIQLMCNGLDKPDVTSVSIDPTFAAYLHNDFLSIQPNAREDRRIYLNRNKRKVCREDE QLYSTDEVKIKNGLECKIACGSSKVSYVLETEDLLVRVKKRRKTLCHNQDSWRQNKNKSG NSPLLTSPDRAKLHSLSS

Transcript Sequence

Transcript ID	AT1G24190.3
Transcript Infomation	\| SIN3-like 3 \| Chr1:8563554-8570536 REVERSE LENGTH=4348 \| 201606
Sequence	CTTCATAAAAACATAAAACTCTCGTTTGCTCAGTGAGTCTTTTCTTTCTGTCTGAAAATT GTTGAATAGTTTTTGTCTTCTCAGCTGTTTCGTCGGAGGAAGCTTCTTCTTCTAGACTTC TTCTTCTTCTTCTTCTTCGTCTTCTCTGAATTTCTTCGCTCTGTTCAACTTCAAACACCA TGGTTGGAGGAGGAAGTGCTCAGAAGCTAACTACAAACGACGCTCTTGCATATCTTAAAG CCGTGAAGGACAAATTTCAGGATCAACGTGGAAAATATGACGAGTTTCTCGAGGTTATGA AGAATTTTAAATCTCAAAGAGTTGATACAGCTGGTGTGATAACTAGGGTAAAAGAACTTT TCAAAGGACACCAAGAGTTGATTTTGGGGTTTAATACTTTCTTGCCTAAGGGTTTTGAGA TCACACTTCAACCTGAGGATGGACAACCTCCACTGAAGAAACGTGTTGAGTTTGAGGAAG CTATTAGCTTTGTTAACAAGATTAAGACAAGGTTTCAGGGAGATGATCGTGTATACAAAT CATTTTTAGACATTTTAAACATGTACAGAAGGGATAGCAAGTCCATCACTGAGGTCTACC AGGAGGTTGCGATCCTATTTCGGGATCATTCAGATCTGCTCGTGGAGTTTACTCACTTTC TACCTGATACTTCAGCAACGGCCTCTATTCCATCTGTTAAAACTTCAGTTCGTGAGAGAG GGGTTTCTCTGGCTGATAAGAAGGACCGGATCATTACTCCACATCCTGACCATGACTATG GTACTGAACATATTGACCAGGACCGGGAGAGACCTATTAAGAAAGAAAATAAAGAACACA TGAGAGGTACTAACAAAGAAAATGAGCATAGGGATGCCAGAGATTTCGAACCACATAGCA AAAAAGAGCAATTTCTCAACAAGAAGCAGAAACTACATATTAGAGGCGATGATCCTGCTG AAATTTCCAATCAAAGTAAACTTTCTGGAGCGGTTCCTAGTTCATCTACTTATGATGAAA AAGGTGCCATGAAAAGTTACAGTCAAGATCTAGCTATTGTCGATAGAGTAAAGGAAAAGC TTAACGCCTCAGAGTACCAGGAGTTTTTACGTTGTCTTAATCTCTTTTCAAAAGAGATAA TCAGCCGACCAGAACTGCAATCTTTGGTAGGGAATTTAATCGGAGTATATCCTGACCTCA TGGATTCCTTTATAGAGTTTTTGGTGCAATGTGAAAAGAATGAAGGACTGCTCTCTGGTA TTCTGACTAAGAAATCCTTGTGGAGTGAAGGCAAATATCCTCAACCGTCACTGGACAATG ATAGAGACCAGGAACATAAGAGAGATGACGGGCTTAGAGATAGAGATCATGAAAAGGAAA GGCTTGAAAAAGCAGCTGCAAATCTGAAATGGGCAAAGCCAATCAGTGAACTAGATCTCT CGAACTGTGAACAATGCACTCCTAGTTATCGGTTACTTCCAAAGAATTACCCAATTTCTA TTGCAAGCCAGAAGACAGAGATCGGTAAACTGGTTCTTAATGATCACTGGGTCTCCGTCA CATCAGGAAGTGAAGATTATTCATTTAGCCACATGCGTAAGAACCAGTATGAAGAGAGCC TCTTCAAATGTGAGGATGACAGGTTTGAGCTGGACATGCTATTAGAGTCTGTAAATTCAA CGACAAAGCATGTGGAAGAATTATTGACAAAAATTAACAGTAATGAACTGAAAACCAACA GTCCCATCCGTGTCGAGGATCACCTCACAGCTCTAAACTTAAGATGCATAGAACGGTTGT ATGGTGATCACGGGCTCGATGTGATGGATGTGCTGAAGAAGAACGTGTCTCTTGCTTTAC CTGTTATCCTAACACGTTTGAAACAGAAGCAAGAAGAGTGGGCAAGGTGTCGTTCTGATT TTGACAAAGTCTGGGCTGAGATATATGCTAAGAATTACTACAAGTCGCTTGATCATCGAA GTTTCTACTTCAAACAGCAGGATTCAAAGAAGCTGAGCATGAAAGCATTGTTGGCAGAGA TAAAAGAGATTACTGAAAAGAAGCGAGAGGATGATTCACTTCTTGCATTTGCAGCCGGAA ATAGACTATCCATTTCCCCAGATTTGGAGTTTGATTATCCGGATCATGACCTTCATGAAG ATCTTTACCAGCTGATCAAATATTCGTGTGCAGAAATGTGCTCTACCGAACAGTTAGATA AGGTAATGAAGATTTGGACAACTTTCGTGGAACAAATATTTGGTGTTCCTTCTCGCCCTC AAGGTGCTGAAGACCAAGAAGACGTTGTCAAGTCCATGAACCAGAATGTAAAGAGCGGTA GTTCAAGTGCTGGCGAGAGTGAGGGAAGTCCTCACAATTACGCTAGTGTTGCCGACTCTA GACGCTCAAAGTCATCTCGAAAAGCTAATGAACATAGTCAGTTGGGGCAAACTAGTAATT CGGAGAGGGATGGCGCCGCTGGTAGGACATCAGATGCCTTATGTGAGACTGCTCAGCATG AGAAAATGCTGAAGAATGTAGTTACGTCTGATGAAAAGCCTGAAAGCAAGCAAGCTGTTT CTATTGAGCGTGCACACGATTCAACTGCTCTCGCTGTGGATGGATTATTAGATCAAAGTA ATGGAGGAAGCAGTATAGTACACATGACCGGACATTGCAATAATAATCTGAAGCCTGTGA CCTGTGGAACAGAGTTGGAGTTGAAAATGAATGATGGTAATGGGCCAAAATTAGAGGTTG GTAACAAGAAGTTATTGACAAATGGGATCGCGGTAGAAATAACAAGTGACCAAGAGATGG CAGGAACATCCAAAGTTGAAAGAGAAGAAGGTGAACTTTCTCCAAATGGAGACTTTGAGG AAGATAATTTTGCAGTTTATGCAAAAACTGATTTTGAGACCTTCAGCAAAGCGAATGATA GTACTGGAAATAACATTAGCGGAGATAGAAGTAGAGAAGGGGAACCATCTTGTCTGGAGA CAAGGGCTGAGAATGACGCTGAAGGTGACGAAAACGCCGCAAGATCATCAGAGGACAGCA GAAATGAATATGAGAACGGTGATGTTTCTGGAACGGAATCTGGTGGTGGTGAAGATCCGG AGGATGATTTGGATAACAATAACAAAGGAGAAAGCGAAGGTGAGGCTGAATGTATGGCTG ATGCACATGATGCTGAAGAAAATGGGTCTGCCTTACCCGTTTCAGCACGATTCTTGCTGC ATGTAAAGCCCTTAGTAAAGTATGTTCCTTCAGCTATAGCTTTGCATGACAAGGACAAAG ACTCTCTGAAGAACTCCCAAGTTTTCTATGGAAATGATTCGTTTTACGTGCTTTTCAGGC TGCACCGGATATTGTATGAGAGAATACTATCAGCAAAAGTTAACTCATCATCCCCGGAAG GAAAGTGGAGGACCTCAAATACCAAAAATCCTACTGATTCCTATGCTAGATTCATGACTG CACTCTACAACTTACTTGATGGTACATCTGATAATGCCAAGTTTGAAGATGACTGCCGAG CGATAATCGGGACTCAGTCTTATATTCTCTTCACATTGGACAAACTGATCCATAAATTCA TCAAGCATCTACAAGTAGTAGTAGCTGATGAGATGGACAACAAGCTTCTTCAGCTTTATT TTTATGAGAAATCCAGAAGGCCTGAAACGATTTTTGATGCTGTGTATTACGATAATACCC GTGTCCTCCTCCCTGATGAGAATATTTACCGTATTGAATGTAGATTATCAACCCCAGCGA AACTCTCTATTCAGCTTATGTGCAACGGTCTTGATAAGCCCGATGTGACATCTGTATCCA TTGACCCGACCTTTGCAGCTTATCTCCACAATGACTTCCTCTCCATACAACCAAATGCAA GGGAGGATCGCAGAATCTATTTAAATAGGAACAAGCGCAAAGTTTGTCGTGAAGATGAAC AGTTATACAGCACAGATGAAGTTAAGATCAAAAATGGTTTGGAGTGTAAGATAGCTTGCG GTTCTTCAAAGGTCTCCTATGTACTAGAAACAGAAGATTTGTTGGTGCGAGTTAAAAAGA GAAGAAAAACTTTGTGCCACAATCAGGATTCTTGGAGACAAAACAAAAACAAAAGTGGCA ATTCTCCATTGTTGACTTCACCGGATAGAGCCAAACTGCATTCTCTATCTTCATAAGAAG AAGAAGCAACAAAGGATTTGGCTTTTTGTTGTCTGTGACTGAAAAAGAAAACAATCACTC ACAAAAATGATGTTACATATGTAAAGTTTGTCTTTATTCACTCTCTTGTTGTAAAGTTTT GTATGTTGTTGTAACATTTATCAAAAAT