Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G20970.1
CDS Infomation	\| calponin-like domain protein \| Chr1:7314338-7319246 FORWARD LENGTH=4095 \| 201606
Sequence	ATGCCGGTGGAGGTAGAGAGAGACCAAGGAGAGGTGTCGGTGAAGGTTGATTTTGAGAAT GCGACTGAGATTAAACCGGAGGTAGTTGTTTCGGCCACCAAAGAGGACGTGGTGAATGGG ATCAGCCATGGTGGTAGTAATAATGGCAACGGGAACGATACCGATGGTTCTTACGATTTC ATTACGGAGAATGATACCGTTGGAGATGATTTTGTAGAGTCTGATTATGTTAAGCCTGTT GATGATGCCAATGTGGAGAAAGATCTTAAGGAAGGAGAGAATGTGAAGGTAGATGCTCCA AGTATTGCCGATGATGATGTTTTGGGAGTTTCTCAAGATAGTCAAACCCTGGAAAAGTCT GAGCTAGAAAGTACAGATGATGGACCAGAGGAAGTCGTTGAGATCCCAAAGTCGGAAGTT GAGGATTCTCTTGAAAAAAGTGTCGACCAGCAGCATCCTGGTAATGGGCATCTAGAAAGT GGGCTTGAGGGTAAAGTGGAATCTAAAGAGGAAGTGGAGCAACTTCATGATTCTGAAGTT GGATCCAAGGATCTGACAAAGAATAACGTAGAGGAGCCTGAAGTTGAAATCGAATCTGAT AGTGAAACAGATGTCGAGGGACATCAAGGGGACAAGATTGAAGCCCAAGAAAAATCTGAT CGGGATTTGGATGTTTCTCAAGATCTAAAACTTAACGAGAATGTAGAAAAGCACCCTGTT GACTCAGATGAAGTAAGGGAGTCTGAGTTGGTGAGCGCTAAGGTTTCTCCAACTGAGCCT AGTGATGGAGGCATGGATTTGGGACAACCTACGGTAACAGATCCAGCTGAAACCATCAAT GGATCTGAATCTGTGAATGATCACGTCGGATCAGAACCTGTAACAGTTTTGGAACCTGTT TCTGTTGAAAACGGTCACCCTCCAGTAGAATCAGAGTTGGAGAGAAGTAGTGATGTTCCA TTCACTTCAGTGGCGGAAAAAGTCAATGCTTCCGATGGTGAAGTGTTGCCAGACTCTGGA ACCGTGGATGTTGTTGTATCAGAGGTAAGCAGTGACGTCCCTGCTGAGACTCAAGCTCTC AATGCCATCAGCTTGGATTCCCAGCCTTCTGGCAAAGATAGTGTTGTTGAAAATGGTAAT AGCAAATCAGAATCTGAAGACAGCAAGATGCAATCGGAAATTGGAGCTGTTGATGATGGC TCTGTGTCTGATGGGAGTATAAACACTCATCCAGAATCTCAAGATGCCAGCGATCCTACT TGTGATCAAGGTGGAAAACAACACATATCATCCGAAGTTAAGGAAGTTCTTGATGCCCCT GCTTCAGAAGAAATAAGTGATGCTGTTATTGTTGCCAAAGATAATGGTTCAGAAGCTGCT ATTTCTGATGGCTTATCTTGTACTAACCAGCAGGGATCAGAAAGTGATGAGATATCTGGG CTAGTTGAAAAACTCCCATCCCATGCGCTACATGAGGTTGTGTCTTCTGCGAATGACACG AGTGTAATTGTAAGCGATGACACCAAAAGTCAAGGTTTATCAGAGGATCATGGAGTTGAC ACTAACCAGACAATTCAAGATGATTGTAGTGCTGAGTTGGAAGAAGTTACCGATGTGAAT GTAAAACATGCTCCAAATGAGAAAGTTCAAGGAGACAATAGCGAGGGGAACTTAAATGTT GGTGGTGATGTTTGTCTAAATTCTGCTGAAGAAGCGAAAGAATTACCTACAGGGGATCTT TCTGGGAATGCATCACATGAGAGTGCTGAGACTCTCTCTACAAACATCGACGAACCATTG AGCTTGTTGGATACCAAAACTGCTGTCTCTGACTTTGCAGAAAGCTCAGCAGGAGTGGCT GGCGAAATAGACGCTGTTGCCATGGAATCTGAAGCTGCTCAATCAATTAAACAATGCGCT GAAGCACATGTAGCTCCATCCATTATTGAAGATGGTGAAATAGACAGAGAAGTCAATTGT GGTTCAGAAGTGAACGTGACAAAGACTACTCCTGTTGCTGTGCGCGAGGATATACCACCT AAAGAAGTTTCTGAGATGGAAGAATCGGACGTCAAAGAAAGATCTTCGATAAATACAGAT GAAGAAGTCGCTACTGCCTCAGTTGCATCTGAAATCAAGACCTGTGCACAGGATCTTGAA TCTAAAGTGGTTACATCTACTGATACCATACATACAGGAGCTAAAGACTGTGTGGACAGC CAACCTGCTGAAAACAAAGAAGGAAATGTTGTTGATAGAACAGATGATAAAGTAGCCTCG ACCGGTGAAGTTTCTGTACTTGATGCTTCTGAAGGGCTTACTGTAGCGGCAGAGATAGAG AAAAGACCTTTTTACTTTCTGCCTAGAGTTCCTAGATATGATGATGAAAAGTTAGCCGAG CAACTGAAGCATGCTGAAGAGCAGGTTGATCAGAAAACACAAAATCGGGATGCTCTTAGA GCGGATATCCAGAAGATACGCGCAATATGTAAGGACTATGATATCAGTTACAAGGCGGTC ATGGCAGAAGAGAGATCTGCAAGAAAAGCAATGCATTCAAAACGGCAGGAAATTGAGGCC CTTCAGTCTATGATTAGCCGGGTTAAAAGTGCTGCGTCTGTTGATGATATTGATTCAAGG GTGCGTAATATGGAACATACGATGCAGCACACAACTTTATCTCTGAATGAAGAAAAAGGT TTCATGCGTGAAATAAAGCAGTTGAAGCAACTTCGCGAGCAGATATCTTCGAGTATGGGT ACCAAGGATGAAGTAAAGCAAGCATTGGATGAGAAAGAGAAAACAGAAGAACGTTTGAAG GTGTTGAGGAAGGAACTAGACGCACTCAGAAACGATCTATCAAAAGCCGAAGAAATCACA AAAGCTGCGAAAAAAAAGTGTGATGGGGAATGGGAAGCACAGAGTAAACTGCAAGAACAG TTCAGAGCTGCTGATGCTGTTCGCCAGGAAGCATTTGTGCACCTACAGGATTTGAAGAAA CAACAACGAGAAAAGAACAAATATTTCTTCAAGTACAGAGATAATTCAAGGGCAGCAAGT GAAATGGCTTTGAAGAAAGACAGAGCAGCACTGCAAAGCCTTTGTTCTGACCAGGTGGAG AATTTCATGAATATGTGGAACAATGACGACGAGTTCCGTAAATACTATGTAAAAAGCAAC ACAAGGAGTACCTTTAGAAGACTAGGAACCCTAGATGGACGATCTCTTGGCCCTGATGAG GAGCCACCTCGGATCACTTATGCTCCAAGAACGGACAAACTTAGAACTTCTAGTGACAGA GCAGAGAAACATGAGGCAGTTCCAGCACAGAAAGAGAAAGTCGTTAAATTTGAAGGTTCA AAAGTTGAAAACAACGGTAAGGAGGTTGCTAAACCCACCGAGCAAAAGAGTCAGACCACT AAATCTAAAAAGGCCGTCAAGCCAGACCAGCCTCCATCAATTGTCACAGAATTGGTTTCT GGAAAAGAGGAGATAGAGAAGTCAGCAACACCGGAAGAAGAAGAGCCGCCTAAGTTAACA AAAGAGGAAGAGGAGTTAATTAAGAAAGAAGAAGAGAAGAGAAAACAAAAGGAAGCTGCA AAGATGAAGGAGCAACATCGGTTAGAGGAAATAGCAAAAGCGAAAGAGGCAATGGAGAGG AAGAAGAAGAGAGAGGAGAAGGCAAAAGCAAGAGCTGTTCTCAAGGCTCAGAAGGAAGCC GAAGAAAGGGAGAAGGAACGAGAGAAGAAGCTAAGGAAGAAGGAGAGAAGAAAGGGGATT TTTACATCAGAAGAGACAGCAACAGAAAACCCAATTCCGACAGCAGAAACTGTAGTCGAA ACCCCAAGGGAGATCGAAACTCCAAAGAAACAAACCGTAGAGGAGAGTCAACAAATGAAG AAATCTCACAAACCTTCATCACAGTTTCTGAAACAAAACAAGTCAAAATCGGTTCCTCTG CCTTTAAGAAACCGAGGAAGCAAGAGAAAACTGCGGCAATGGATGTGGATTGGACTCATA GTTGTGATCATCATCGCATTGTTCCTTCTCGGTAATGCCAATCTCTCCTCTCCTGCAAAT CTTTGGTTTACATAA

Peptide Sequence

PEP ID	AT1G20970.1
PEP Infomation	\| calponin-like domain protein \| Chr1:7314338-7319246 FORWARD LENGTH=1364 \| 201606
Sequence	MPVEVERDQGEVSVKVDFENATEIKPEVVVSATKEDVVNGISHGGSNNGNGNDTDGSYDF ITENDTVGDDFVESDYVKPVDDANVEKDLKEGENVKVDAPSIADDDVLGVSQDSQTLEKS ELESTDDGPEEVVEIPKSEVEDSLEKSVDQQHPGNGHLESGLEGKVESKEEVEQLHDSEV GSKDLTKNNVEEPEVEIESDSETDVEGHQGDKIEAQEKSDRDLDVSQDLKLNENVEKHPV DSDEVRESELVSAKVSPTEPSDGGMDLGQPTVTDPAETINGSESVNDHVGSEPVTVLEPV SVENGHPPVESELERSSDVPFTSVAEKVNASDGEVLPDSGTVDVVVSEVSSDVPAETQAL NAISLDSQPSGKDSVVENGNSKSESEDSKMQSEIGAVDDGSVSDGSINTHPESQDASDPT CDQGGKQHISSEVKEVLDAPASEEISDAVIVAKDNGSEAAISDGLSCTNQQGSESDEISG LVEKLPSHALHEVVSSANDTSVIVSDDTKSQGLSEDHGVDTNQTIQDDCSAELEEVTDVN VKHAPNEKVQGDNSEGNLNVGGDVCLNSAEEAKELPTGDLSGNASHESAETLSTNIDEPL SLLDTKTAVSDFAESSAGVAGEIDAVAMESEAAQSIKQCAEAHVAPSIIEDGEIDREVNC GSEVNVTKTTPVAVREDIPPKEVSEMEESDVKERSSINTDEEVATASVASEIKTCAQDLE SKVVTSTDTIHTGAKDCVDSQPAENKEGNVVDRTDDKVASTGEVSVLDASEGLTVAAEIE KRPFYFLPRVPRYDDEKLAEQLKHAEEQVDQKTQNRDALRADIQKIRAICKDYDISYKAV MAEERSARKAMHSKRQEIEALQSMISRVKSAASVDDIDSRVRNMEHTMQHTTLSLNEEKG FMREIKQLKQLREQISSSMGTKDEVKQALDEKEKTEERLKVLRKELDALRNDLSKAEEIT KAAKKKCDGEWEAQSKLQEQFRAADAVRQEAFVHLQDLKKQQREKNKYFFKYRDNSRAAS EMALKKDRAALQSLCSDQVENFMNMWNNDDEFRKYYVKSNTRSTFRRLGTLDGRSLGPDE EPPRITYAPRTDKLRTSSDRAEKHEAVPAQKEKVVKFEGSKVENNGKEVAKPTEQKSQTT KSKKAVKPDQPPSIVTELVSGKEEIEKSATPEEEEPPKLTKEEEELIKKEEEKRKQKEAA KMKEQHRLEEIAKAKEAMERKKKREEKAKARAVLKAQKEAEEREKEREKKLRKKERRKGI FTSEETATENPIPTAETVVETPREIETPKKQTVEESQQMKKSHKPSSQFLKQNKSKSVPL PLRNRGSKRKLRQWMWIGLIVVIIIALFLLGNANLSSPANLWFT

Transcript Sequence

Transcript ID	AT1G20970.1
Transcript Infomation	\| calponin-like domain protein \| Chr1:7313901-7319921 FORWARD LENGTH=5065 \| 201606
Sequence	TTGGTTAATCGATAAATACAATAAATCAGATTAACGAAGCCCTCTGTTCAACAAAGAGGC TTCTCGATCTCGTCCTTAATTCCTTCCTTCTCTAAGCCAGCTGTTTTCTTCTTCTTCTTC TTCATCTCTCTCTCTCTCTCGTCTCCTACTCTCTCTTTGCTCGGACCAAAATTTCCTCAA ATTCCTCCTCTGTTAATCGCCGGCATTGTCTTTCTTACCGATCCGACTATCTCAGCATTC GAAATCTCCGGCGACAAAGCCTGATCTCAAGCTTATCGTTCGTGAAGCGGTGAAAATGCC GGTGGAGGTAGAGAGAGACCAAGGAGAGGTGTCGGTGAAGGTTGATTTTGAGAATGCGAC TGAGATTAAACCGGAGGTAGTTGTTTCGGCCACCAAAGAGGACGTGGTGAATGGGATCAG CCATGGTGGTAGTAATAATGGCAACGGGAACGATACCGATGGTTCTTACGATTTCATTAC GGAGAATGATACCGTTGGAGATGATTTTGTAGAGTCTGATTATGTTAAGCCTGTTGATGA TGCCAATGTGGAGAAAGATCTTAAGGAAGGAGAGAATGTGAAGGTAGATGCTCCAAGTAT TGCCGATGATGATGTTTTGGGAGTTTCTCAAGATAGTCAAACCCTGGAAAAGTCTGAGCT AGAAAGTACAGATGATGGACCAGAGGAAGTCGTTGAGATCCCAAAGTCGGAAGTTGAGGA TTCTCTTGAAAAAAGTGTCGACCAGCAGCATCCTGGTAATGGGCATCTAGAAAGTGGGCT TGAGGGTAAAGTGGAATCTAAAGAGGAAGTGGAGCAACTTCATGATTCTGAAGTTGGATC CAAGGATCTGACAAAGAATAACGTAGAGGAGCCTGAAGTTGAAATCGAATCTGATAGTGA AACAGATGTCGAGGGACATCAAGGGGACAAGATTGAAGCCCAAGAAAAATCTGATCGGGA TTTGGATGTTTCTCAAGATCTAAAACTTAACGAGAATGTAGAAAAGCACCCTGTTGACTC AGATGAAGTAAGGGAGTCTGAGTTGGTGAGCGCTAAGGTTTCTCCAACTGAGCCTAGTGA TGGAGGCATGGATTTGGGACAACCTACGGTAACAGATCCAGCTGAAACCATCAATGGATC TGAATCTGTGAATGATCACGTCGGATCAGAACCTGTAACAGTTTTGGAACCTGTTTCTGT TGAAAACGGTCACCCTCCAGTAGAATCAGAGTTGGAGAGAAGTAGTGATGTTCCATTCAC TTCAGTGGCGGAAAAAGTCAATGCTTCCGATGGTGAAGTGTTGCCAGACTCTGGAACCGT GGATGTTGTTGTATCAGAGGTAAGCAGTGACGTCCCTGCTGAGACTCAAGCTCTCAATGC CATCAGCTTGGATTCCCAGCCTTCTGGCAAAGATAGTGTTGTTGAAAATGGTAATAGCAA ATCAGAATCTGAAGACAGCAAGATGCAATCGGAAATTGGAGCTGTTGATGATGGCTCTGT GTCTGATGGGAGTATAAACACTCATCCAGAATCTCAAGATGCCAGCGATCCTACTTGTGA TCAAGGTGGAAAACAACACATATCATCCGAAGTTAAGGAAGTTCTTGATGCCCCTGCTTC AGAAGAAATAAGTGATGCTGTTATTGTTGCCAAAGATAATGGTTCAGAAGCTGCTATTTC TGATGGCTTATCTTGTACTAACCAGCAGGGATCAGAAAGTGATGAGATATCTGGGCTAGT TGAAAAACTCCCATCCCATGCGCTACATGAGGTTGTGTCTTCTGCGAATGACACGAGTGT AATTGTAAGCGATGACACCAAAAGTCAAGGTTTATCAGAGGATCATGGAGTTGACACTAA CCAGACAATTCAAGATGATTGTAGTGCTGAGTTGGAAGAAGTTACCGATGTGAATGTAAA ACATGCTCCAAATGAGAAAGTTCAAGGAGACAATAGCGAGGGGAACTTAAATGTTGGTGG TGATGTTTGTCTAAATTCTGCTGAAGAAGCGAAAGAATTACCTACAGGGGATCTTTCTGG GAATGCATCACATGAGAGTGCTGAGACTCTCTCTACAAACATCGACGAACCATTGAGCTT GTTGGATACCAAAACTGCTGTCTCTGACTTTGCAGAAAGCTCAGCAGGAGTGGCTGGCGA AATAGACGCTGTTGCCATGGAATCTGAAGCTGCTCAATCAATTAAACAATGCGCTGAAGC ACATGTAGCTCCATCCATTATTGAAGATGGTGAAATAGACAGAGAAGTCAATTGTGGTTC AGAAGTGAACGTGACAAAGACTACTCCTGTTGCTGTGCGCGAGGATATACCACCTAAAGA AGTTTCTGAGATGGAAGAATCGGACGTCAAAGAAAGATCTTCGATAAATACAGATGAAGA AGTCGCTACTGCCTCAGTTGCATCTGAAATCAAGACCTGTGCACAGGATCTTGAATCTAA AGTGGTTACATCTACTGATACCATACATACAGGAGCTAAAGACTGTGTGGACAGCCAACC TGCTGAAAACAAAGAAGGAAATGTTGTTGATAGAACAGATGATAAAGTAGCCTCGACCGG TGAAGTTTCTGTACTTGATGCTTCTGAAGGGCTTACTGTAGCGGCAGAGATAGAGAAAAG ACCTTTTTACTTTCTGCCTAGAGTTCCTAGATATGATGATGAAAAGTTAGCCGAGCAACT GAAGCATGCTGAAGAGCAGGTTGATCAGAAAACACAAAATCGGGATGCTCTTAGAGCGGA TATCCAGAAGATACGCGCAATATGTAAGGACTATGATATCAGTTACAAGGCGGTCATGGC AGAAGAGAGATCTGCAAGAAAAGCAATGCATTCAAAACGGCAGGAAATTGAGGCCCTTCA GTCTATGATTAGCCGGGTTAAAAGTGCTGCGTCTGTTGATGATATTGATTCAAGGGTGCG TAATATGGAACATACGATGCAGCACACAACTTTATCTCTGAATGAAGAAAAAGGTTTCAT GCGTGAAATAAAGCAGTTGAAGCAACTTCGCGAGCAGATATCTTCGAGTATGGGTACCAA GGATGAAGTAAAGCAAGCATTGGATGAGAAAGAGAAAACAGAAGAACGTTTGAAGGTGTT GAGGAAGGAACTAGACGCACTCAGAAACGATCTATCAAAAGCCGAAGAAATCACAAAAGC TGCGAAAAAAAAGTGTGATGGGGAATGGGAAGCACAGAGTAAACTGCAAGAACAGTTCAG AGCTGCTGATGCTGTTCGCCAGGAAGCATTTGTGCACCTACAGGATTTGAAGAAACAACA ACGAGAAAAGAACAAATATTTCTTCAAGTACAGAGATAATTCAAGGGCAGCAAGTGAAAT GGCTTTGAAGAAAGACAGAGCAGCACTGCAAAGCCTTTGTTCTGACCAGGTGGAGAATTT CATGAATATGTGGAACAATGACGACGAGTTCCGTAAATACTATGTAAAAAGCAACACAAG GAGTACCTTTAGAAGACTAGGAACCCTAGATGGACGATCTCTTGGCCCTGATGAGGAGCC ACCTCGGATCACTTATGCTCCAAGAACGGACAAACTTAGAACTTCTAGTGACAGAGCAGA GAAACATGAGGCAGTTCCAGCACAGAAAGAGAAAGTCGTTAAATTTGAAGGTTCAAAAGT TGAAAACAACGGTAAGGAGGTTGCTAAACCCACCGAGCAAAAGAGTCAGACCACTAAATC TAAAAAGGCCGTCAAGCCAGACCAGCCTCCATCAATTGTCACAGAATTGGTTTCTGGAAA AGAGGAGATAGAGAAGTCAGCAACACCGGAAGAAGAAGAGCCGCCTAAGTTAACAAAAGA GGAAGAGGAGTTAATTAAGAAAGAAGAAGAGAAGAGAAAACAAAAGGAAGCTGCAAAGAT GAAGGAGCAACATCGGTTAGAGGAAATAGCAAAAGCGAAAGAGGCAATGGAGAGGAAGAA GAAGAGAGAGGAGAAGGCAAAAGCAAGAGCTGTTCTCAAGGCTCAGAAGGAAGCCGAAGA AAGGGAGAAGGAACGAGAGAAGAAGCTAAGGAAGAAGGAGAGAAGAAAGGGGATTTTTAC ATCAGAAGAGACAGCAACAGAAAACCCAATTCCGACAGCAGAAACTGTAGTCGAAACCCC AAGGGAGATCGAAACTCCAAAGAAACAAACCGTAGAGGAGAGTCAACAAATGAAGAAATC TCACAAACCTTCATCACAGTTTCTGAAACAAAACAAGTCAAAATCGGTTCCTCTGCCTTT AAGAAACCGAGGAAGCAAGAGAAAACTGCGGCAATGGATGTGGATTGGACTCATAGTTGT GATCATCATCGCATTGTTCCTTCTCGGTAATGCCAATCTCTCCTCTCCTGCAAATCTTTG GTTTACATAAGAATAAAAAAAGAAAGAAGAAGTGGCACACTCTTACACACTTTGCCTTGT GCTTTTTATAGTATGTTTTTTTTTGGCTCATCTAAATTAGTTTGGATTGTGGTTGGTGCT TTTATTCTTTTTTCTTTTAAGTGGGGAAGCTTTGATTCATTGATTTCACACGAACGACAG ACATATAGATTGGTTTTGCTTGCTCTGGGTATATATGTCTAAGAAACACGGTTCCAGTTT TTTTTATTTTCTAATATACCATAATATATTTATTAAAGCAATAACTTCTTCTCATCTTTT CGATTGATATATAAACTGGTGGAAGAGTCTCTTGTTTTCTTTGTTATGTCACTAGAAGTT CTACGATTGTTCGTTCTTGTCACATAAGTCATCCAGGGGTGGTTCCTCATCAGTGCCAAG AGATCGTCCATCTAGACTTCCCTAGTCTTTTTAAGGACAGAGCAGAGAAACATGAGACTG TTCCACCAGTTTCAGCACTGGATTCAGTCTTATATTTGCCCCTTCATCAAAATCATCTTC GGGATCAAATTTTGGAACAGTCTATGAGGCGCACGAGAACTGCTAGTCGCAGTAGCGCTA CGTTTTGCCTTGACAACCGCAGTAGTTTGACTAGAACGCCATAACCAATTGATACGACCG AATGCTAGCATCTTAGCTTAAAGAT