Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G16830.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:5760793-5762619 FORWARD LENGTH=1827 \| 201606
Sequence	ATGCTATGGAGATGCAATTGGGTGAAGCAGAGGAAGAGAATCCTTAACACACTCAGTTTC TCTTCGATTCACGGTCAATATCCTCGGGAGTATACTGCCGCGAAGCCACTCACGCACGAT AATGTGTATTCTTGTTTACGAGAATCTCCAGCTGATCTCAAAACTTTGAATTTCTTCTTC TGGTGCGCGAAGCAGAACAATTACTTCCACGATGATCGAGCATTTGATCACATGGTTGGT GTTGTTGAGAAACTAACTCGTGAATACTATAGCATTGATCGAATCATAGAGAGATTGAAA ATCTCTGGTTGTGAGATTAAGCCTCGGGTTTTTTTGTTGTTGCTGGAAATATTTTGGCGT GGCCATATCTATGATAAGGCTATTGAGGTTTACACTGGCATGAGTAGTTTTGGATTTGTG CCCAACACTCGTGCCATGAATATGATGATGGATGTTAATTTCAAACTCAATGTTGTTAAT GGAGCTCTGGAAATTTTTGAAGGAATCCGTTTTCGAAATTTCTTTAGTTTCGACATTGCA TTGAGTCATTTTTGCAGTAGAGGGGGTAGAGGGGATTTGGTTGGTGTGAAGATAGTTTTG AAGAGAATGATTGGAGAAGGTTTTTATCCTAACAGAGAGAGGTTTGGGCAGATTCTTAGG CTGTGCTGTAGAACAGGCTGCGTCTCTGAAGCATTTCAAGTAGTTGGATTGATGATTTGT AGTGGAATCTCTGTATCTGTTAATGTATGGAGCATGTTGGTTAGCGGGTTTTTTCGTTCA GGAGAGCCGCAAAAGGCGGTTGATCTGTTCAATAAGATGATTCAGATTGGTTGCTCACCT AATCTTGTGACGTATACTAGTTTGATCAAAGGGTTTGTGGATTTAGGAATGGTTGATGAA GCGTTTACCGTGCTAAGTAAAGTGCAATCTGAAGGTTTAGCTCCAGATATTGTTCTTTGC AATTTGATGATACACACGTACACAAGACTCGGAAGATTCGAAGAAGCTCGTAAGGTTTTC ACTAGTTTGGAAAAAAGGAAACTTGTGCCGGATCAGTATACTTTTGCATCAATACTGTCT AGTCTATGTTTGTCTGGGAAGTTTGATCTCGTTCCTAGGATCACCCACGGTATAGGAACA GATTTTGATCTGGTTACTGGAAACTTGCTCTCAAACTGTTTCAGCAAGATTGGTTACAAT TCGTACGCTTTGAAAGTACTCAGCATCATGTCTTACAAAGATTTTGCTTTGGATTGTTAT ACATATACTGTGTATCTTAGTGCACTTTGTCGAGGAGGAGCACCTCGCGCTGCCATTAAG ATGTATAAAATAATAATCAAGGAGAAAAAACATCTCGATGCTCATTTTCATTCTGCGATA ATCGACAGTCTTATAGAGCTTGGTAAATACAATACCGCGGTTCATTTGTTTAAACGATGC ATCTTGGAGAAGTATCCTTTAGATGTTGTGTCGTATACAGTAGCTATTAAGGGGCTTGTG CGTGCGAAAAGGATCGAGGAAGCCTATTCTTTGTGTTGCGACATGAAAGAAGGTGGGATT TATCCGAATCGACGGACTTATCGGACTATTATTTCTGGTCTGTGCAAGGAGAAGGAGACT GAGAAAGTGAGAAAGATTTTGAGGGAATGCATCCAGGAGGGAGTTGAGTTGGATCCTAAT ACTAAGTTTCAAGTGTATAGTCTCTTGTCTCGATATCGCGGAGACTTTTCTGAATTTAGA TCGGTTTTCGAGAAATGGAAATCGGAATTTACAGAAAATGTGGATGTTTCCGATTCCGAC GATGAATTATTTGTTTCTGTTGGTTGA

Peptide Sequence

PEP ID	AT1G16830.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:5760793-5762619 FORWARD LENGTH=608 \| 201606
Sequence	MLWRCNWVKQRKRILNTLSFSSIHGQYPREYTAAKPLTHDNVYSCLRESPADLKTLNFFF WCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWR GHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIA LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMIC SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE AFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILS SLCLSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCY TYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRC ILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKET EKVRKILRECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWKSEFTENVDVSDSD DELFVSVG

Transcript Sequence

Transcript ID	AT1G16830.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:5760626-5762619 FORWARD LENGTH=1994 \| 201606
Sequence	CCAAACCAAAAACCCTTTCGCCGTTTCTTGCTTTCACTAACCTCGCCGGCGTTGTTCCCT TTCCATGTCACAAACTTTGTCCTCGATCTCAGCTGGGTTTCCCATAAAAGTTCTCTCTTT CCCGAGAAACCCCGTTTCATGGTTAGGATCTTAGCGTCACGAGTAAGATGCTATGGAGAT GCAATTGGGTGAAGCAGAGGAAGAGAATCCTTAACACACTCAGTTTCTCTTCGATTCACG GTCAATATCCTCGGGAGTATACTGCCGCGAAGCCACTCACGCACGATAATGTGTATTCTT GTTTACGAGAATCTCCAGCTGATCTCAAAACTTTGAATTTCTTCTTCTGGTGCGCGAAGC AGAACAATTACTTCCACGATGATCGAGCATTTGATCACATGGTTGGTGTTGTTGAGAAAC TAACTCGTGAATACTATAGCATTGATCGAATCATAGAGAGATTGAAAATCTCTGGTTGTG AGATTAAGCCTCGGGTTTTTTTGTTGTTGCTGGAAATATTTTGGCGTGGCCATATCTATG ATAAGGCTATTGAGGTTTACACTGGCATGAGTAGTTTTGGATTTGTGCCCAACACTCGTG CCATGAATATGATGATGGATGTTAATTTCAAACTCAATGTTGTTAATGGAGCTCTGGAAA TTTTTGAAGGAATCCGTTTTCGAAATTTCTTTAGTTTCGACATTGCATTGAGTCATTTTT GCAGTAGAGGGGGTAGAGGGGATTTGGTTGGTGTGAAGATAGTTTTGAAGAGAATGATTG GAGAAGGTTTTTATCCTAACAGAGAGAGGTTTGGGCAGATTCTTAGGCTGTGCTGTAGAA CAGGCTGCGTCTCTGAAGCATTTCAAGTAGTTGGATTGATGATTTGTAGTGGAATCTCTG TATCTGTTAATGTATGGAGCATGTTGGTTAGCGGGTTTTTTCGTTCAGGAGAGCCGCAAA AGGCGGTTGATCTGTTCAATAAGATGATTCAGATTGGTTGCTCACCTAATCTTGTGACGT ATACTAGTTTGATCAAAGGGTTTGTGGATTTAGGAATGGTTGATGAAGCGTTTACCGTGC TAAGTAAAGTGCAATCTGAAGGTTTAGCTCCAGATATTGTTCTTTGCAATTTGATGATAC ACACGTACACAAGACTCGGAAGATTCGAAGAAGCTCGTAAGGTTTTCACTAGTTTGGAAA AAAGGAAACTTGTGCCGGATCAGTATACTTTTGCATCAATACTGTCTAGTCTATGTTTGT CTGGGAAGTTTGATCTCGTTCCTAGGATCACCCACGGTATAGGAACAGATTTTGATCTGG TTACTGGAAACTTGCTCTCAAACTGTTTCAGCAAGATTGGTTACAATTCGTACGCTTTGA AAGTACTCAGCATCATGTCTTACAAAGATTTTGCTTTGGATTGTTATACATATACTGTGT ATCTTAGTGCACTTTGTCGAGGAGGAGCACCTCGCGCTGCCATTAAGATGTATAAAATAA TAATCAAGGAGAAAAAACATCTCGATGCTCATTTTCATTCTGCGATAATCGACAGTCTTA TAGAGCTTGGTAAATACAATACCGCGGTTCATTTGTTTAAACGATGCATCTTGGAGAAGT ATCCTTTAGATGTTGTGTCGTATACAGTAGCTATTAAGGGGCTTGTGCGTGCGAAAAGGA TCGAGGAAGCCTATTCTTTGTGTTGCGACATGAAAGAAGGTGGGATTTATCCGAATCGAC GGACTTATCGGACTATTATTTCTGGTCTGTGCAAGGAGAAGGAGACTGAGAAAGTGAGAA AGATTTTGAGGGAATGCATCCAGGAGGGAGTTGAGTTGGATCCTAATACTAAGTTTCAAG TGTATAGTCTCTTGTCTCGATATCGCGGAGACTTTTCTGAATTTAGATCGGTTTTCGAGA AATGGAAATCGGAATTTACAGAAAATGTGGATGTTTCCGATTCCGACGATGAATTATTTG TTTCTGTTGGTTGA