Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G15780.2
CDS Infomation	\| mediator of RNA polymerase II transcription subunit 15a-like protein \| Chr1:5430522-5435921 REVERSE LENGTH=4101 \| 201606
Sequence	ATGGATAATAACAATTGGAGGCCTTCTCTTCCAAACGGAGAGCCTGCCATGGATACAGGT GACTGGAGAACGCAATTGCCACCTGATTCTCGTCAGAAGATCGTCAACAAGATAATGGAA ACACTAAAGAAGCACCTTCCATTTTCCGGACCAGAGGGAATTAACGAGCTCAGGAGAATT GCAGCTAGATTCGAGGAGAAAATTTTCAGCGGTGCTCTTAACCAGACTGATTACCTTCGG AAAATATCAATGAAGATGCTGACAATGGAGACTAAATCACAAAATGCAGCTGGTTCTTCC GCAGCTATCCCTGCCGCTAATAATGGCACATCCATAGATTCGATACCCACCAATCAAGGC CAACTTCTTCCAGGATCGTTATCAACCAATCAATCTCAAGCACCTCAGCCGTTGCTGTCC CAAACCATGCAGAATAATACTGCCTCTGGAATGACGGGTTCTACTGCTTTACCATCTTCC ATGCCACCTGTTTCTTCCATAACCAATAATAACACCACAAGCGTTGTGAACCAGAATGCC AATATGCAAAATGTAGCTGGAATGTTGCAAGATTCATCTGGGCAGCATGGCCTTTCCTCG AACATGTTTTCAGGACCCCAAAGGCAGATGCTGGGTAGGCCACATGCTATGTCTTCACAG CAACAACAGCAGCCATATCTTTACCAGCAGCAGCTACAGCAGCAACTTCTCAAGCAGAAC TTCCAGTCAGGGAATGTTCCCAATCCCAATTCGCTTTTGCCATCACACATTCAACAACAG CAGCAAAATGTGCTGCAGCCTAATCAACTGCATTCATCTCAACAACCTGGTGTTCCAACA TCTGCGACTCAGCCCTCCACTGTGAACTCAGCTCCTCTCCAAGGTCTCCACACCAATCAG CAATCAAGTCCGCAATTGTCTTCTCAGCAGACGACACAATCTATGCTTCGTCAGCATCAA TCGTCGATGCTAAGGCAACATCCGCAATCACAACAAGCCTCTGGTATCCATCAGCAGCAA TCTTCATTGCCGCAACAATCAATTTCTCCTCTACAGCAGCAGCCTACACAATTAATGCGG CAACAAGCTGCAAATAGCTCAGGCATCCAACAGAAGCAGATGATGGGGCAGCATGTTGTT GGGGATATGCAGCAGCAACATCAGCAAAGGTTACTGAACCAACAAAATAATGTTATGAAC ATACAACAGCAGCAGTCGCAGCAGCAACCACTGCAGCAGCCACAGCAACAGCAGAAACAG CAGCCACCGGCCCAGCAGCAGTTGATGTCTCAACAAAACAGCCTCCAGGCAACGCATCAG AACCCACTGGGCACTCAAAGCAATGTTGCAGGATTGCAGCAACCACAACAACAGATGCTC AATTCCCAGGTTGGCAATTCGAGTTTGCAGAATAACCAGCACTCGGTGCACATGTTATCA CAACCAACGGTTGGGCTGCAACGAACACATCAGGCTGGCCATGGCTTGTATTCTTCTCAG GGACAACAGTCACAAAATCAGCCATCACAACAGCAGATGATGCCACAGCTTCAATCGCAT CATCAGCAGCTGGGTTTGCAACAACAACCTAATCTGCTACAACAGGATGTGCAACAAAGG CTACAAGCTTCAGGCCAAGTCACTGGTTCCCTGCTTCCACCTCAAAATGTTGTGGACCAA CAGAGACAACTATATCAATCCCAAAGAACCCTTCCGGAGATGCCATCATCATCGCTGGAT TCGACAGCACAGACGGAAAGTGCAAATGGAGGTGATTGGCAAGAGGAGGTTTACCAAAAG ATCAAATCTATGAAAGAGACTTACTTACCAGATCTGAATGAAATCTACCAGAGAGTTGCA GCAAAGTTGCAGCAAGATTCTATGCCACAGCAACAAAGATCAGATCAGCTTGAGAAACTG AGACAATTCAAAACAATGTTGGAGCGAATGATACAATTTCTATCTGTTTCAAAGAGCAAC ATCATGCCCGCATTAAAAGATAAGGTGGCTTATTATGAGAAGCAGATTATAGGTTTCTTA AATATGCACAGGCCGAGGAAGCCAGTACAGCAAGGGCAGCTTCCGCAATCTCAGATGCAG CCTATGCAGCAACCACAATCTCAGACAGTTCAAGATCAATCCCATGATAACCAAACAAAT CCGCAGATGCAATCAATGAGCATGCAGGGTGCTGGGCCAAGGGCACAACAGAGTAGTATG ACAAATATGCAGAGCAATGTTCTATCATCTCGTCCTGGAGTTTCAGCTCCACAGCAGAAC ATTCCCAGTTCCATACCGGCTTCTAGTTTAGAATCAGGCCAAGGAAATACCTTGAACAAT GGACAGCAGGTTGCCATGGGATCTATGCAACAAAATACTTCTCAACTAGTAAATAACAGT TCTGCCTCTGCTCAAAGTGGGTTGAGCACACTGCAGTCGAATGTGAATCAACCCCAGTTA AGTTCCAGTTTGCTTCAGCATCAGCACCTCAAGCAACAGCAAGATCAACAAATGCAGCTC AAACAGCAATTTCAACAGCGCCAGATGCAACAGCAACAGTTGCAAGCAAGACAGCAACAG CAACAGCAACAGTTGCAAGCAAGACAGCAAGCGGCACAATTACAGCAGATGAATGATATG AATGATTTAACATCGAGGCAGGGGATGAATGTCAGTCGTGGGATGTTTCAGCAACATTCT ATGCAGGGTCAGCGTGCGAATTATCCTCTTCAACAGTTAAAACCAGGAGCTGTTTCGTCG CCTCAACTTCTGCAAGGTGCATCTCCTCAGATGTCACAACATTTGTCTCCTCAGGTTGAC CAGAAAAATACTGTCAACAAGATGGGAACTCCATTGCAACCTGCAAATTCCCCTTTTGTT GTCCCATCTCCTTCTTCAACCCCCTTGGCTCCGTCCCCTATGCAAGTTGACTCTGAGAAA CCTGGTTCTTCTTCGTTGTCAATGGGAAATATTGCACGCCAACAAGCAACCGGCATGCAA GGTGTAGTTCAGTCCCTAGCAATTGGCACTCCAGGGATCTCTGCCTCTCCTCTCCTTCAG GAGTTTACTAGTCCTGATGGGAATATTTTAAATTCTTCGACAATTACATCTGGAAAACCG AGTGCTACTGAGCTGCCTATTGAACGCCTTATTAGAGCCGTGAAGTCCATCTCACCACAA GCCCTTTCTTCTGCAGTAAGTGACATCGGATCTGTTGTAAGCATGGTTGATCGGATAGCT GGTTCAGCACCAGGAAACGGTTCAAGAGCTTCCGTTGGTGAAGACTTGGTTGCAATGACT AAGTGCCGTCTCCAAGCAAGAAACTTCATGACCCAAGAGGGAATGATGGCGACTAAGAAA ATGAAGCGTCACACAACCGCAATGCCACTAAGCGTTGCTTCACTGGGAGGAAGTGTTGGT GATAACTACAAGCAGTTTGCTGGTTCAGAAACATCCGATCTAGAATCTACTGCGACTTCG GATGGCAAGAAGGCAAGAACTGAGACCGAGCATGCCCTTTTGGAGGAAATAAAGGAAATA AACCAGCGGCTGATAGATACAGTTGTTGAGATAAGTGATGATGAAGATGCTGCTGATCCT AGTGAGGTTGCAATATCAAGCATAGGGTGTGAAGGAACAACAGTTAGATTCTCGTTTATA GCTGTTTCTCTCAGCCCAGCCTTGAAGGCTCATCTCTCATCAACACAAATGTCTCCTATT CAACCATTGCGTCTGCTGGTTCCTTGTAGCTACCCCAATGGCTCTCCATCTCTTCTAGAT AAACTCCCGGTCGAAACCAGGTACAAGCAAATCCTTCAGTCTCAAGTAAATAGAACCATA GATTTTCCGTACCGAGTCGAGCAAACTTCTACGATACAGTTAAAATCTTCACAAGAATCA TCTACTAGAAACCCTTTATTAGAAACTGCGTTATCTTCTTACCGTAACACGGTCTGGTTT CTTGAACAGCAAAGAAAACGAGGACCTGTCGTCCAAAGCTATGGCAAGGTTCAACATATT GCTAAGAAGTTTGTCACAGCCGATGTCGCTCAAAGACATAGCCAAGACATGGGACGCCTG TGCTCGGGCAGTGATCTGTGA

Peptide Sequence

PEP ID	AT1G15780.2
PEP Infomation	\| mediator of RNA polymerase II transcription subunit 15a-like protein \| Chr1:5430522-5435921 REVERSE LENGTH=1366 \| 201606
Sequence	MDNNNWRPSLPNGEPAMDTGDWRTQLPPDSRQKIVNKIMETLKKHLPFSGPEGINELRRI AARFEEKIFSGALNQTDYLRKISMKMLTMETKSQNAAGSSAAIPAANNGTSIDSIPTNQG QLLPGSLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPSSMPPVSSITNNNTTSVVNQNA NMQNVAGMLQDSSGQHGLSSNMFSGPQRQMLGRPHAMSSQQQQQPYLYQQQLQQQLLKQN FQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSSQQPGVPTSATQPSTVNSAPLQGLHTNQ QSSPQLSSQQTTQSMLRQHQSSMLRQHPQSQQASGIHQQQSSLPQQSISPLQQQPTQLMR QQAANSSGIQQKQMMGQHVVGDMQQQHQQRLLNQQNNVMNIQQQQSQQQPLQQPQQQQKQ QPPAQQQLMSQQNSLQATHQNPLGTQSNVAGLQQPQQQMLNSQVGNSSLQNNQHSVHMLS QPTVGLQRTHQAGHGLYSSQGQQSQNQPSQQQMMPQLQSHHQQLGLQQQPNLLQQDVQQR LQASGQVTGSLLPPQNVVDQQRQLYQSQRTLPEMPSSSLDSTAQTESANGGDWQEEVYQK IKSMKETYLPDLNEIYQRVAAKLQQDSMPQQQRSDQLEKLRQFKTMLERMIQFLSVSKSN IMPALKDKVAYYEKQIIGFLNMHRPRKPVQQGQLPQSQMQPMQQPQSQTVQDQSHDNQTN PQMQSMSMQGAGPRAQQSSMTNMQSNVLSSRPGVSAPQQNIPSSIPASSLESGQGNTLNN GQQVAMGSMQQNTSQLVNNSSASAQSGLSTLQSNVNQPQLSSSLLQHQHLKQQQDQQMQL KQQFQQRQMQQQQLQARQQQQQQQLQARQQAAQLQQMNDMNDLTSRQGMNVSRGMFQQHS MQGQRANYPLQQLKPGAVSSPQLLQGASPQMSQHLSPQVDQKNTVNKMGTPLQPANSPFV VPSPSSTPLAPSPMQVDSEKPGSSSLSMGNIARQQATGMQGVVQSLAIGTPGISASPLLQ EFTSPDGNILNSSTITSGKPSATELPIERLIRAVKSISPQALSSAVSDIGSVVSMVDRIA GSAPGNGSRASVGEDLVAMTKCRLQARNFMTQEGMMATKKMKRHTTAMPLSVASLGGSVG DNYKQFAGSETSDLESTATSDGKKARTETEHALLEEIKEINQRLIDTVVEISDDEDAADP SEVAISSIGCEGTTVRFSFIAVSLSPALKAHLSSTQMSPIQPLRLLVPCSYPNGSPSLLD KLPVETRYKQILQSQVNRTIDFPYRVEQTSTIQLKSSQESSTRNPLLETALSSYRNTVWF LEQQRKRGPVVQSYGKVQHIAKKFVTADVAQRHSQDMGRLCSGSDL

Transcript Sequence

Transcript ID	AT1G15780.2
Transcript Infomation	\| mediator of RNA polymerase II transcription subunit 15a-like protein \| Chr1:5430040-5436618 REVERSE LENGTH=4856 \| 201606
Sequence	ATTTTTTTGTTTATTTTGAAAAAAAAAAAAACTTGTTATAAGCGAACTGGTAGGCTCGAT TATGATTTACGACGCGAACAAGTTTCCTCTGTCTCTTTACCTAGAAGATCCTATATTCTT CATTCGTTTTTCGATCAAGCTAAACCCTAAATCCAGCTCCAATTTCCCCTTTTTCTCCTC TGTTTTCCTAATATCAAGCCCTAATCGTTGTACCAACCTTGACTCCGTCAAACGCCAAAT CTCCTTGATTGGCTCTGAATTTGAGAAAACTTGATGGATAATAACAATTGGAGGCCTTCT CTTCCAAACGGAGAGCCTGCCATGGATACAGGTGACTGGAGAACGCAATTGCCACCTGAT TCTCGTCAGAAGATCGTCAACAAGATAATGGAAACACTAAAGAAGCACCTTCCATTTTCC GGACCAGAGGGAATTAACGAGCTCAGGAGAATTGCAGCTAGATTCGAGGAGAAAATTTTC AGCGGTGCTCTTAACCAGACTGATTACCTTCGGAAAATATCAATGAAGATGCTGACAATG GAGACTAAATCACAAAATGCAGCTGGTTCTTCCGCAGCTATCCCTGCCGCTAATAATGGC ACATCCATAGATTCGATACCCACCAATCAAGGCCAACTTCTTCCAGGATCGTTATCAACC AATCAATCTCAAGCACCTCAGCCGTTGCTGTCCCAAACCATGCAGAATAATACTGCCTCT GGAATGACGGGTTCTACTGCTTTACCATCTTCCATGCCACCTGTTTCTTCCATAACCAAT AATAACACCACAAGCGTTGTGAACCAGAATGCCAATATGCAAAATGTAGCTGGAATGTTG CAAGATTCATCTGGGCAGCATGGCCTTTCCTCGAACATGTTTTCAGGACCCCAAAGGCAG ATGCTGGGTAGGCCACATGCTATGTCTTCACAGCAACAACAGCAGCCATATCTTTACCAG CAGCAGCTACAGCAGCAACTTCTCAAGCAGAACTTCCAGTCAGGGAATGTTCCCAATCCC AATTCGCTTTTGCCATCACACATTCAACAACAGCAGCAAAATGTGCTGCAGCCTAATCAA CTGCATTCATCTCAACAACCTGGTGTTCCAACATCTGCGACTCAGCCCTCCACTGTGAAC TCAGCTCCTCTCCAAGGTCTCCACACCAATCAGCAATCAAGTCCGCAATTGTCTTCTCAG CAGACGACACAATCTATGCTTCGTCAGCATCAATCGTCGATGCTAAGGCAACATCCGCAA TCACAACAAGCCTCTGGTATCCATCAGCAGCAATCTTCATTGCCGCAACAATCAATTTCT CCTCTACAGCAGCAGCCTACACAATTAATGCGGCAACAAGCTGCAAATAGCTCAGGCATC CAACAGAAGCAGATGATGGGGCAGCATGTTGTTGGGGATATGCAGCAGCAACATCAGCAA AGGTTACTGAACCAACAAAATAATGTTATGAACATACAACAGCAGCAGTCGCAGCAGCAA CCACTGCAGCAGCCACAGCAACAGCAGAAACAGCAGCCACCGGCCCAGCAGCAGTTGATG TCTCAACAAAACAGCCTCCAGGCAACGCATCAGAACCCACTGGGCACTCAAAGCAATGTT GCAGGATTGCAGCAACCACAACAACAGATGCTCAATTCCCAGGTTGGCAATTCGAGTTTG CAGAATAACCAGCACTCGGTGCACATGTTATCACAACCAACGGTTGGGCTGCAACGAACA CATCAGGCTGGCCATGGCTTGTATTCTTCTCAGGGACAACAGTCACAAAATCAGCCATCA CAACAGCAGATGATGCCACAGCTTCAATCGCATCATCAGCAGCTGGGTTTGCAACAACAA CCTAATCTGCTACAACAGGATGTGCAACAAAGGCTACAAGCTTCAGGCCAAGTCACTGGT TCCCTGCTTCCACCTCAAAATGTTGTGGACCAACAGAGACAACTATATCAATCCCAAAGA ACCCTTCCGGAGATGCCATCATCATCGCTGGATTCGACAGCACAGACGGAAAGTGCAAAT GGAGGTGATTGGCAAGAGGAGGTTTACCAAAAGATCAAATCTATGAAAGAGACTTACTTA CCAGATCTGAATGAAATCTACCAGAGAGTTGCAGCAAAGTTGCAGCAAGATTCTATGCCA CAGCAACAAAGATCAGATCAGCTTGAGAAACTGAGACAATTCAAAACAATGTTGGAGCGA ATGATACAATTTCTATCTGTTTCAAAGAGCAACATCATGCCCGCATTAAAAGATAAGGTG GCTTATTATGAGAAGCAGATTATAGGTTTCTTAAATATGCACAGGCCGAGGAAGCCAGTA CAGCAAGGGCAGCTTCCGCAATCTCAGATGCAGCCTATGCAGCAACCACAATCTCAGACA GTTCAAGATCAATCCCATGATAACCAAACAAATCCGCAGATGCAATCAATGAGCATGCAG GGTGCTGGGCCAAGGGCACAACAGAGTAGTATGACAAATATGCAGAGCAATGTTCTATCA TCTCGTCCTGGAGTTTCAGCTCCACAGCAGAACATTCCCAGTTCCATACCGGCTTCTAGT TTAGAATCAGGCCAAGGAAATACCTTGAACAATGGACAGCAGGTTGCCATGGGATCTATG CAACAAAATACTTCTCAACTAGTAAATAACAGTTCTGCCTCTGCTCAAAGTGGGTTGAGC ACACTGCAGTCGAATGTGAATCAACCCCAGTTAAGTTCCAGTTTGCTTCAGCATCAGCAC CTCAAGCAACAGCAAGATCAACAAATGCAGCTCAAACAGCAATTTCAACAGCGCCAGATG CAACAGCAACAGTTGCAAGCAAGACAGCAACAGCAACAGCAACAGTTGCAAGCAAGACAG CAAGCGGCACAATTACAGCAGATGAATGATATGAATGATTTAACATCGAGGCAGGGGATG AATGTCAGTCGTGGGATGTTTCAGCAACATTCTATGCAGGGTCAGCGTGCGAATTATCCT CTTCAACAGTTAAAACCAGGAGCTGTTTCGTCGCCTCAACTTCTGCAAGGTGCATCTCCT CAGATGTCACAACATTTGTCTCCTCAGGTTGACCAGAAAAATACTGTCAACAAGATGGGA ACTCCATTGCAACCTGCAAATTCCCCTTTTGTTGTCCCATCTCCTTCTTCAACCCCCTTG GCTCCGTCCCCTATGCAAGTTGACTCTGAGAAACCTGGTTCTTCTTCGTTGTCAATGGGA AATATTGCACGCCAACAAGCAACCGGCATGCAAGGTGTAGTTCAGTCCCTAGCAATTGGC ACTCCAGGGATCTCTGCCTCTCCTCTCCTTCAGGAGTTTACTAGTCCTGATGGGAATATT TTAAATTCTTCGACAATTACATCTGGAAAACCGAGTGCTACTGAGCTGCCTATTGAACGC CTTATTAGAGCCGTGAAGTCCATCTCACCACAAGCCCTTTCTTCTGCAGTAAGTGACATC GGATCTGTTGTAAGCATGGTTGATCGGATAGCTGGTTCAGCACCAGGAAACGGTTCAAGA GCTTCCGTTGGTGAAGACTTGGTTGCAATGACTAAGTGCCGTCTCCAAGCAAGAAACTTC ATGACCCAAGAGGGAATGATGGCGACTAAGAAAATGAAGCGTCACACAACCGCAATGCCA CTAAGCGTTGCTTCACTGGGAGGAAGTGTTGGTGATAACTACAAGCAGTTTGCTGGTTCA GAAACATCCGATCTAGAATCTACTGCGACTTCGGATGGCAAGAAGGCAAGAACTGAGACC GAGCATGCCCTTTTGGAGGAAATAAAGGAAATAAACCAGCGGCTGATAGATACAGTTGTT GAGATAAGTGATGATGAAGATGCTGCTGATCCTAGTGAGGTTGCAATATCAAGCATAGGG TGTGAAGGAACAACAGTTAGATTCTCGTTTATAGCTGTTTCTCTCAGCCCAGCCTTGAAG GCTCATCTCTCATCAACACAAATGTCTCCTATTCAACCATTGCGTCTGCTGGTTCCTTGT AGCTACCCCAATGGCTCTCCATCTCTTCTAGATAAACTCCCGGTCGAAACCAGGTACAAG CAAATCCTTCAGTCTCAAGTAAATAGAACCATAGATTTTCCGTACCGAGTCGAGCAAACT TCTACGATACAGTTAAAATCTTCACAAGAATCATCTACTAGAAACCCTTTATTAGAAACT GCGTTATCTTCTTACCGTAACACGGTCTGGTTTCTTGAACAGCAAAGAAAACGAGGACCT GTCGTCCAAAGCTATGGCAAGGTTCAACATATTGCTAAGAAGTTTGTCACAGCCGATGTC GCTCAAAGACATAGCCAAGACATGGGACGCCTGTGCTCGGGCAGTGATCTGTGAGTACGC ACAGCAATTTGGCGGTGGAACTTTCAGCTCAAAATACGGCACTTGGGAGAAATATGTAGC AGCTTCCTGAATCTGACGGATCTCTCTCGTCTTCAATAGCAGCTCTGTGATTCACTTGCA GGTTCATGTCAAAACTAAAGAAAAAAAGCCAAAAAGTTTTTTCCTCACTTTTTGTTGTAT AGTATAAGTTGTTTTCCCACACACGTGATTGGGATTTTTTGTTATCTGTTTGCAAAAGCT TATGCTATATTATTGAATATATTTAAATAATATTATTTTAACTTTATTGTATGTATTTTG TGAATCTTGTTAGTATATTCGTCATTTTCTTCTAATTCTGAAGTGCAATTACCCCTTTTT TGGGGTCTTGCTGAATGTTGTATTTTGAGATTTGTTGTAATACGCATTTTGAGATCGTTC AGAAGAGTTTCAACTTCTTTACTCTGTTCAGTTGTCACAATAAAATGGCTGTTTGA