Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G15480.1
CDS Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr1:5318307-5320422 FORWARD LENGTH=1785 \| 201606
Sequence	ATGTTTGCTCTTTCCAAGGTTTTGCGGAGAAGTCAGAGTCTCCGCCTAGGAGCTTGCAAT GCTGTCTACTCTAAGCTAGATATACCATTGGGAGAAAGAAACATTGCTATTGAATCAAAC GCTTTGATTCATGATAAACACGAAGCTTTGCCTAGATTTTATGAGCTCTCTTGGTCTTCC TCTACCGGAAGACGTTCACTTTCCTCGGACGCTGGAGCTAAAACTACCGGAGATGACGAT GACCTCGAAGACAAGAATGTAGACCTTGCAACTCCAGACGAGACTAGTAGTGATAGTGAA GATGGTGAGGAGTTTTCCGGTGATGAAGGGGATATTGAAGGAGCAGAGCTGGAACTACAT GTCCCGGAAAGCAAGAGACCATCGGAGATGTTTAAGGCCATTGTTTCTGTCTCAGGTCTG TCTGTAGGGAGTGCTCTTGATAAGTGGGTTGAACAAGGAAAGGATACCAACCGTAAAGAG TTTGAAAGTGCGATGCTACAACTCCGTAAACGTCGGATGTTTGGGAGAGCATTGCAGATG ACAGAATGGTTAGACGAAAATAAGCAGTTTGAAATGGAGGAGAGAGATTATGCTTGTCGG CTTGATCTGATTTCCAAGGTACGTGGCTGGTACAAGGGAGAAGCTTATATCAAAACAATC CCGGAATCTTTCAGAGGGGAATTGGTCTACCGAACCCTCCTGGCGAATCATGTGGCAACT AGCAATGTGAGAACAGCTGAAGCAGTTTTCAACAAAATGAAGGACTTGGGATTCCCTCTG TCAACATTCACCTGTAATCAGATGCTTATTCTTTACAAAAGGGTCGACAAGAAGAAAATA GCCGATGTGTTATTGCTGTTGGAGAAGGAAAATCTGAAGCCGAATCTTAACACATACAAA ATCCTGATTGATACCAAAGGATCATCAAATGACATAACTGGGATGGAACAAATTGTGGAG ACAATGAAAAGTGAAGGTGTTGAGCTTGACCTTCGTGCACGAGCTCTCATTGCAAGACAC TATGCATCAGCTGGGCTTAAAGAGAAGGCTGAGAAAGTGCTGAAAGAGATGGAAGGTGAA AGCTTGGAGGAAAATCGGCATATGTGCAAGGATTTGCTTTCCGTCTATGGCTATCTCCAG AGGGAGGATGAAGTGCGCAGAGTTTGGAAGATCTGTGAAGAAAACCCCCGTTATAACGAG GTCCTTGCTGCAATCTTGGCTTTTGGAAAGATCGATAAAGTCAAAGATGCAGAGGCGGTT TTTGAGAAGGTGTTGAAGATGTCCCATAGAGTTTCTTCTAATGTTTACTCCGTTCTCTTG AGGGTTTACGTGGATCACAAGATGGTCTCAGAGGGTAAGGATCTTGTTAAGCAGATGTCA GACAGCGGGTGCAATATTGGGGCCTTAACATGGGATGCAGTGATCAAGCTCTATGTGGAA GCCGGGGAAGTAGAAAAGGCTGAGTCTTCACTGAGCAAGGCAATACAGTCGAAACAGATT AAACCGTTGATGAGCTCCTTCATGTACTTAATGCACGAGTATGTGAGAAGGGGTGATGTT CATAACACAGAGAAAATCTTCCAGAGGATGAAGCAAGCTGGCTATCAATCTCGCTTCTGG GCGTACCAAACCCTTATCCAAGCTTATGTCAATGCCAAAGCTCCAGCTTATGGAATGAAG GAAAGAATGAAAGCTGATAACATCTTCCCAAATAAAAGATTAGCTGCTCAACTCGCTAAA GCCGATCCCTTCAAGAAGACCCCTCTCTCGGATCTCCTTGATTGA

Peptide Sequence

PEP ID	AT1G15480.1
PEP Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr1:5318307-5320422 FORWARD LENGTH=594 \| 201606
Sequence	MFALSKVLRRSQSLRLGACNAVYSKLDIPLGERNIAIESNALIHDKHEALPRFYELSWSS STGRRSLSSDAGAKTTGDDDDLEDKNVDLATPDETSSDSEDGEEFSGDEGDIEGAELELH VPESKRPSEMFKAIVSVSGLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQM TEWLDENKQFEMEERDYACRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVAT SNVRTAEAVFNKMKDLGFPLSTFTCNQMLILYKRVDKKKIADVLLLLEKENLKPNLNTYK ILIDTKGSSNDITGMEQIVETMKSEGVELDLRARALIARHYASAGLKEKAEKVLKEMEGE SLEENRHMCKDLLSVYGYLQREDEVRRVWKICEENPRYNEVLAAILAFGKIDKVKDAEAV FEKVLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVE AGEVEKAESSLSKAIQSKQIKPLMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGYQSRFW AYQTLIQAYVNAKAPAYGMKERMKADNIFPNKRLAAQLAKADPFKKTPLSDLLD

Transcript Sequence

Transcript ID	AT1G15480.1
Transcript Infomation	\| Tetratricopeptide repeat (TPR)-like superfamily protein \| Chr1:5317973-5320630 FORWARD LENGTH=2155 \| 201606
Sequence	CAAATAGTCAAATACAAAGAAAGTGTGAAAGTTAAAACCCTAAACCCTTAATTTGAGCTC TCTGCTCTCCTGGTTTTAGTTTTCCTCTATTTCGTGCTCAATTCGCTTGTTCTCCAGTTC CACTCTATCAGTGCCGGCGGCGATATTGTCCGAGGATAAAACATGTTTGCTCTTTCCAAG GTTTTGCGGAGAAGTCAGAGTCTCCGCCTAGGAGCTTGCAATGCTGTCTACTCTAAGCTA GATATACCATTGGGAGAAAGAAACATTGCTATTGAATCAAACGCTTTGATTCATGATAAA CACGAAGCTTTGCCTAGATTTTATGAGCTCTCTTGGTCTTCCTCTACCGGAAGACGTTCA CTTTCCTCGGACGCTGGAGCTAAAACTACCGGAGATGACGATGACCTCGAAGACAAGAAT GTAGACCTTGCAACTCCAGACGAGACTAGTAGTGATAGTGAAGATGGTGAGGAGTTTTCC GGTGATGAAGGGGATATTGAAGGAGCAGAGCTGGAACTACATGTCCCGGAAAGCAAGAGA CCATCGGAGATGTTTAAGGCCATTGTTTCTGTCTCAGGTCTGTCTGTAGGGAGTGCTCTT GATAAGTGGGTTGAACAAGGAAAGGATACCAACCGTAAAGAGTTTGAAAGTGCGATGCTA CAACTCCGTAAACGTCGGATGTTTGGGAGAGCATTGCAGATGACAGAATGGTTAGACGAA AATAAGCAGTTTGAAATGGAGGAGAGAGATTATGCTTGTCGGCTTGATCTGATTTCCAAG GTACGTGGCTGGTACAAGGGAGAAGCTTATATCAAAACAATCCCGGAATCTTTCAGAGGG GAATTGGTCTACCGAACCCTCCTGGCGAATCATGTGGCAACTAGCAATGTGAGAACAGCT GAAGCAGTTTTCAACAAAATGAAGGACTTGGGATTCCCTCTGTCAACATTCACCTGTAAT CAGATGCTTATTCTTTACAAAAGGGTCGACAAGAAGAAAATAGCCGATGTGTTATTGCTG TTGGAGAAGGAAAATCTGAAGCCGAATCTTAACACATACAAAATCCTGATTGATACCAAA GGATCATCAAATGACATAACTGGGATGGAACAAATTGTGGAGACAATGAAAAGTGAAGGT GTTGAGCTTGACCTTCGTGCACGAGCTCTCATTGCAAGACACTATGCATCAGCTGGGCTT AAAGAGAAGGCTGAGAAAGTGCTGAAAGAGATGGAAGGTGAAAGCTTGGAGGAAAATCGG CATATGTGCAAGGATTTGCTTTCCGTCTATGGCTATCTCCAGAGGGAGGATGAAGTGCGC AGAGTTTGGAAGATCTGTGAAGAAAACCCCCGTTATAACGAGGTCCTTGCTGCAATCTTG GCTTTTGGAAAGATCGATAAAGTCAAAGATGCAGAGGCGGTTTTTGAGAAGGTGTTGAAG ATGTCCCATAGAGTTTCTTCTAATGTTTACTCCGTTCTCTTGAGGGTTTACGTGGATCAC AAGATGGTCTCAGAGGGTAAGGATCTTGTTAAGCAGATGTCAGACAGCGGGTGCAATATT GGGGCCTTAACATGGGATGCAGTGATCAAGCTCTATGTGGAAGCCGGGGAAGTAGAAAAG GCTGAGTCTTCACTGAGCAAGGCAATACAGTCGAAACAGATTAAACCGTTGATGAGCTCC TTCATGTACTTAATGCACGAGTATGTGAGAAGGGGTGATGTTCATAACACAGAGAAAATC TTCCAGAGGATGAAGCAAGCTGGCTATCAATCTCGCTTCTGGGCGTACCAAACCCTTATC CAAGCTTATGTCAATGCCAAAGCTCCAGCTTATGGAATGAAGGAAAGAATGAAAGCTGAT AACATCTTCCCAAATAAAAGATTAGCTGCTCAACTCGCTAAAGCCGATCCCTTCAAGAAG ACCCCTCTCTCGGATCTCCTTGATTGAGTTGCGTTACAGCTACAACATCATCCGCCTTGT GAATCTTTGGTTTGATTGATCAACCTTTTATCCATGTTGGTAGAAACTTCAGTAGCTTAG TTTAAAAAAGACCTCCTGATATATAAATTCTGTTTGGTTGCTGCTATCTGGTTTTTATTT AGTCCCGTTCTTCCGGCTTAATATAATGACAATGGTGGTGAGCAAACGAAAGCAA