Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G12840.1
CDS Infomation	\| vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) \| Chr1:4375584-4378220 FORWARD LENGTH=1128 \| 201606
Sequence	ATGACTTCGAGATATTGGGTGGTGTCTCTTCCAGTGAAAGACTCTGCTTCTTCGTTATGG AATCGATTACAAGAGCAGATCTCTAAGCATTCCTTTGATACTCCAGTTTATCGGTTTAAC ATTCCTAATCTTCGTGTTGGAACCTTAGATTCTCTACTCGCTCTCGGCGATGATCTGCTT AAGTCGAACAGCTTTGTGGAAGGAGTTTCGCAAAAGATCAGGAGACAGATCGAAGAATTG GAGAGGATTTCTGGTGTTGAGAGCAACGCTCTTACAGTTGATGGAGTTCCTGTTGATTCT TATCTCACCAGGTTTGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTGAAGGAG GTTGTGGACAATATTCAGTCTCAGGTTGCAAAAATTGAGGATGATCTCAAGGTTCGTGTT GCTGAATATAACAATATCCGTGGTCAACTCAATGCCATTAACCGAAAGCAAAGTGGAAGC TTAGCTGTTCGTGACCTCTCAAACTTGGTTAAGCCAGAAGATATTGTCGAGTCCGAACAT CTCGTAACTCTCCTTGCAGTTGTTCCGAAGTATTCCCAAAAAGACTGGCTAGCATGTTAT GAGACTTTGACCGATTATGTGGTTCCTAGGTCCTCGAAGAAATTGTTTGAGGATAATGAG TATGCCCTTTACACCGTCACTCTCTTTACTCGTGTCGCAGATAATTTCAGGATTGCTGCT CGTGAGAAAGGATTCCAAGTCCGTGATTTTGAACAAAGTGTTGAAGCACAAGAGACTCGT AAACAAGAGCTAGCAAAGTTGGTTCAGGATCAGGAAAGTTTGAGAAGCTCTCTTTTGCAG TGGTGCTACACCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCATTTCTGTGCTGTGCGT ACATTCGCTGAGAGCATTATGAGATACGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTA TCTCCGGCTGTGAAAAGTGAAAAGAAAGTACGCTCCATTCTTGAACGCTTGTGTGATTCT ACCAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCATGGCTGGTTTAGCTGGT GACTCAGAGACACATCCTTATGTCTCCTTCACTATCAACCTTGCTTAA

Peptide Sequence

PEP ID	AT1G12840.1
PEP Infomation	\| vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) \| Chr1:4375584-4378220 FORWARD LENGTH=375 \| 201606
Sequence	MTSRYWVVSLPVKDSASSLWNRLQEQISKHSFDTPVYRFNIPNLRVGTLDSLLALGDDLL KSNSFVEGVSQKIRRQIEELERISGVESNALTVDGVPVDSYLTRFVWDEAKYPTMSPLKE VVDNIQSQVAKIEDDLKVRVAEYNNIRGQLNAINRKQSGSLAVRDLSNLVKPEDIVESEH LVTLLAVVPKYSQKDWLACYETLTDYVVPRSSKKLFEDNEYALYTVTLFTRVADNFRIAA REKGFQVRDFEQSVEAQETRKQELAKLVQDQESLRSSLLQWCYTSYGEVFSSWMHFCAVR TFAESIMRYGLPPAFLACVLSPAVKSEKKVRSILERLCDSTNSLYWKSEEDAGAMAGLAG DSETHPYVSFTINLA

Transcript Sequence

Transcript ID	AT1G12840.1
Transcript Infomation	\| vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3) \| Chr1:4374205-4378514 FORWARD LENGTH=2801 \| 201606
Sequence	AAGCGACTAAAGATCAGAAAGCATAAGAGGCACAATGGATTGAATTGCAAGAACATCATA GATATATATAAAGCCCACTTTGGTCCAAGCGTTTGAAACATCAATAGATATAACTAATAA TCACTGAACAGTGACAAACTCTCTTTTAGAATCAAAGGAACTAATTCTCAGTTATCTTAA TCACTAACCTCTTACAAGCTAAGGTCTTTAAGCATCACTATCACTGCTTTCATCATCCTC GTCGTTGACATGGCGGTTACTGAATTCATTGGGGATGAAAACTCCAGGCTGGCTCGATCT TCTCCTAGTCCTCGACGGAAGGATATTATCCAAATCAACCTCAGCCAAAGGATCATCGGA GAAATCGCTTTCGTCGTCTTCATCAAAACCTTCGTCATCTTCATCATCATCACTGTCGTC TTCATCATCACTTTCTTCCACTTCGATCATTTTTCCCTTTCCCTTATCCTCTCGCGAAAT CCCTTTACCTTTCCTATCAACAACTTCTTCTTCTTCTTCTTCTTCCTCGTCGTCTTCCTC TTCATCTTCTTCATCCTCTTGCTCCTCTTCAGCTCCAACATCGCCGATTACGCCACTCTC AACCTCTTCAGCTGCTTTCTCCGATAAAACCGATGATTCTGCTCCAATCGTTTCCTCGGT GGAAGAATTCAGATTCTCGATTTGGCCACTTCCATTAGTTTCTCCGTCTTTGGACTCAGA ATCAGCAGAATTCAATGAAGGATTAAGCTTCTGAGCCTTGTTTGTCACATTATCCTGGTC TTGACAAAACAGATCCGATTTTCGCTTCACAGGAAACGAAGAATCCTGTTGATTCTCAAC ATCCGCCATAGATGAATCAATCTTCTTACTTCAGAGACTCGCGATTTTGGTTTGAGGACG ACGATTCAGAGTTAGGGCTTTGAAGCTGAATCAAAACACTCGAGCCAATTTAGTTTGTAA CCCTAGAAGTTTTTGTAGGGTTTTACCGTCTCTGTTTTTTATTATTTGGATCTCTGAACA CATTTGGCCCAGTATTAGCCCATTTACCTATCTTCTCAAAATATTTGGTTCTTAACAAAT TCAAGCCTAACCATTAGTACAATTTTAATTTTGATCTGTACATTTTCAAAAACCGGACTC GAACCAAGATCAAATTCAACAATTGTGGCAATTTTAATGGTCGAGTCTCCAGTGTGTATG TGGCAGTAGGAGAACGTGCCGGGGGATATTAAACCGGCTCAATGCTACAGTCGTACCGGT TTGTTTTTTTACTCGTTGGTATATAATTAAAACCGGTTATCCAATTTGACAGGCAGAGAG AAGAAGATTTGATTGAAGTACAGATCCATCGGAGAAGAAGACAGAGAGATTGAAGATCAA TGACTTCGAGATATTGGGTGGTGTCTCTTCCAGTGAAAGACTCTGCTTCTTCGTTATGGA ATCGATTACAAGAGCAGATCTCTAAGCATTCCTTTGATACTCCAGTTTATCGGTTTAACA TTCCTAATCTTCGTGTTGGAACCTTAGATTCTCTACTCGCTCTCGGCGATGATCTGCTTA AGTCGAACAGCTTTGTGGAAGGAGTTTCGCAAAAGATCAGGAGACAGATCGAAGAATTGG AGAGGATTTCTGGTGTTGAGAGCAACGCTCTTACAGTTGATGGAGTTCCTGTTGATTCTT ATCTCACCAGGTTTGTGTGGGATGAAGCTAAGTACCCAACAATGTCACCTCTGAAGGAGG TTGTGGACAATATTCAGTCTCAGGTTGCAAAAATTGAGGATGATCTCAAGGTTCGTGTTG CTGAATATAACAATATCCGTGGTCAACTCAATGCCATTAACCGAAAGCAAAGTGGAAGCT TAGCTGTTCGTGACCTCTCAAACTTGGTTAAGCCAGAAGATATTGTCGAGTCCGAACATC TCGTAACTCTCCTTGCAGTTGTTCCGAAGTATTCCCAAAAAGACTGGCTAGCATGTTATG AGACTTTGACCGATTATGTGGTTCCTAGGTCCTCGAAGAAATTGTTTGAGGATAATGAGT ATGCCCTTTACACCGTCACTCTCTTTACTCGTGTCGCAGATAATTTCAGGATTGCTGCTC GTGAGAAAGGATTCCAAGTCCGTGATTTTGAACAAAGTGTTGAAGCACAAGAGACTCGTA AACAAGAGCTAGCAAAGTTGGTTCAGGATCAGGAAAGTTTGAGAAGCTCTCTTTTGCAGT GGTGCTACACCAGTTATGGAGAGGTTTTCAGCTCCTGGATGCATTTCTGTGCTGTGCGTA CATTCGCTGAGAGCATTATGAGATACGGTTTACCTCCGGCGTTCTTGGCATGTGTCTTAT CTCCGGCTGTGAAAAGTGAAAAGAAAGTACGCTCCATTCTTGAACGCTTGTGTGATTCTA CCAACAGTTTATACTGGAAAAGCGAGGAGGATGCAGGAGCCATGGCTGGTTTAGCTGGTG ACTCAGAGACACATCCTTATGTCTCCTTCACTATCAACCTTGCTTAAAAATATGATGAGA GATGCTTTTGATGCCACTTCTCCTCTGGTCTTCTCATCTGTTATATTTGTTTGTGGTCTA TAGATTTCACATTTATTTTTCGTAACATATTTTGATTTTCATAAATAAGGTGGAACTCAA GAGAGATGTTGCTGTAATTTTATTTGGCCGGAGTCTTTTAGATTCCGGCGAGTTTCAGAC ACTTGTGGAAGACAGAAGGGTTATACAGTTGTTAAAGCCTTTTTGTCATTTTGTGACATG GTTGATTTATTTATATCATCACTCTGTTTCGTTTTTGTCTG