Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G12040.1
CDS Infomation	\| leucine-rich repeat/extensin 1 \| Chr1:4070160-4072394 FORWARD LENGTH=2235 \| 201606
Sequence	ATGTTGTTCCCTCCTCTTCGTTCCCTCTTTCTCTTCACCCTCTTGCTCTCCTCCGTTTGT TTCTTACAAATCAAAGCAGACCACGACGATGAAAGCGACTTGGGCAGTGATATCAAAGTA GACAAACGTCTCAAGTTCGAGAACCCGAAGCTACGTCAAGCCTACATTGCTCTTCAATCA TGGAAAAAAGCAATCTTTTCTGATCCTTTCAACTTCACAGCTAATTGGAATGGTTCAGAT GTTTGCTCCTACAATGGAATCTATTGTGCTCCTTCTCCTTCATACCCGAAAACCCGAGTC GTTGCTGGCATTGACCTCAACCACGCTGACATGGCCGGTTACTTGGCTTCCGAGCTAGGT CTCCTCTCTGATCTCGCTCTGTTCCACATTAACTCAAACCGTTTCTGCGGTGAAGTCCCT CTCACGTTTAACCGCATGAAGCTTCTCTACGAGCTTGATCTTAGCAACAACCGATTCGTC GGTAAGTTCCCTAAGGTTGTCCTCTCTTTGCCTTCCCTTAAATTCTTGGATCTCCGCTAC AACGAGTTTGAAGGCAAGATCCCATCAAAGCTCTTCGATAGAGAGCTTGACGCTATATTC TTGAACCATAACCGGTTCCGGTTCGGGATTCCCAAAAACATGGGAAATTCCCCTGTTTCT GCTCTGGTTCTTGCGGACAACAATCTCGGAGGATGCATACCGGGAAGTATCGGTCAAATG GGGAAAACACTCAACGAGCTTATCCTCTCCAACGACAACTTAACCGGTTGTTTACCTCCT CAGATCGGAAACCTCAAGAAAGTGACGGTTTTCGACATCACTTCAAACCGTCTACAAGGT CCGTTACCATCTAGCGTTGGTAACATGAAGAGCCTAGAAGAGCTTCACGTGGCTAACAAT GCCTTCACAGGAGTTATTCCTCCAAGTATCTGCCAGCTTTCTAACCTTGAGAACTTTACT TACTCTTCCAACTACTTCTCCGGTCGTCCTCCTATATGCGCAGCTAGTTTGTTAGCCGAC ATTGTGGTGAACGGTACCATGAACTGCATCACCGGTTTGGCTCGTCAAAGATCGGATAAA CAGTGCTCATCTTTGCTTGCTCGCCCTGTGGATTGCAGTAAGTTTGGATGTTACAACATC TTCTCTCCACCACCACCGACGTTTAAGATGTCACCTGAAGTCCGGACACTTCCTCCACCG ATTTACGTGTACTCATCGCCTCCTCCACCACCGTCGTCAAAGATGTCCCCTACCGTCAGA GCATACTCTCCCCCACCACCACCTTCGTCCAAGATGTCACCCTCTGTCAGAGCATATTCA CCACCACCGCCTCCTTATTCCAAGATGTCACCTAGCGTTCGAGCTTACCCTCCTCCACCA CCACCATCACCATCTCCCCCACCGCCTTACGTATACTCATCTCCTCCACCGCCCTATGTG TACTCATCTCCTCCTCCACCGCCGTATGTGTATTCATCCCCTCCTCCACCGCCTTACGTA TACTCATCTCCTCCACCGCCTTACGTGTACTCATCTCCACCCCCGCCTTACGTATACTCA TCTCCACCTCCGCCTCCTCCAAGTCCACCACCACCGTGTCCTGAATCATCTCCACCACCG CCTGTTGTATACTACGCACCCGTGACACAAAGCCCTCCACCACCATCACCGGTATACTAT CCACCAGTAACACAAAGCCCTCCACCACCATCGCCAGTATACTACCCACCGGTGACAAAC AGTCCACCACCACCATCACCGGTATACTATCCCCCAGTAACATACAGTCCACCACCACCA TCACCAGTTTACTATCCCCAAGTAACACCAAGTCCTCCACCACCATCGCCGCTATACTAT CCCCCAGTAACACCAAGTCCACCACCACCATCACCAGTTTACTATCCCCCAGTAACACCA AGTCCTCCACCACCATCACCAGTTTACTATCCCCCAGTAACACCAAGTCCTCCACCACCA TCACCAGTTTACTATCCATCGGAAACACAAAGTCCTCCACCACCTACTGAGTACTACTAT TCACCAAGCCAGTCTCCGCCACCAACAAAAGCATGTAAAGAAGGCCATCCACCACAAGCA ACACCAAGTTACGAACCACCTCCAGAATATTCATACTCATCATCACCACCACCACCATCT CCTACGTCCTACTTTCCACCGATGCCAAGCGTCTCATATGATGCATCTCCTCCTCCTCCT CCGTCTTACTACTAG

Peptide Sequence

PEP ID	AT1G12040.1
PEP Infomation	\| leucine-rich repeat/extensin 1 \| Chr1:4070160-4072394 FORWARD LENGTH=744 \| 201606
Sequence	MLFPPLRSLFLFTLLLSSVCFLQIKADHDDESDLGSDIKVDKRLKFENPKLRQAYIALQS WKKAIFSDPFNFTANWNGSDVCSYNGIYCAPSPSYPKTRVVAGIDLNHADMAGYLASELG LLSDLALFHINSNRFCGEVPLTFNRMKLLYELDLSNNRFVGKFPKVVLSLPSLKFLDLRY NEFEGKIPSKLFDRELDAIFLNHNRFRFGIPKNMGNSPVSALVLADNNLGGCIPGSIGQM GKTLNELILSNDNLTGCLPPQIGNLKKVTVFDITSNRLQGPLPSSVGNMKSLEELHVANN AFTGVIPPSICQLSNLENFTYSSNYFSGRPPICAASLLADIVVNGTMNCITGLARQRSDK QCSSLLARPVDCSKFGCYNIFSPPPPTFKMSPEVRTLPPPIYVYSSPPPPPSSKMSPTVR AYSPPPPPSSKMSPSVRAYSPPPPPYSKMSPSVRAYPPPPPPSPSPPPPYVYSSPPPPYV YSSPPPPPYVYSSPPPPPYVYSSPPPPYVYSSPPPPYVYSSPPPPPPSPPPPCPESSPPP PVVYYAPVTQSPPPPSPVYYPPVTQSPPPPSPVYYPPVTNSPPPPSPVYYPPVTYSPPPP SPVYYPQVTPSPPPPSPLYYPPVTPSPPPPSPVYYPPVTPSPPPPSPVYYPPVTPSPPPP SPVYYPSETQSPPPPTEYYYSPSQSPPPTKACKEGHPPQATPSYEPPPEYSYSSSPPPPS PTSYFPPMPSVSYDASPPPPPSYY

Transcript Sequence

Transcript ID	AT1G12040.1
Transcript Infomation	\| leucine-rich repeat/extensin 1 \| Chr1:4069992-4072681 FORWARD LENGTH=2690 \| 201606
Sequence	GTGTAAACATGTCACTAATTGAAAATTTCCGTAAAAAAAAAGAAGGCCAAATTGGAGAGA GAGAAAGAGATACGACTTTGGAATTTCTAAACTGTTTTATAAAGATGGAGCACATAGAGA TATTAGATGTTCATAATTAGTAAAATTGGGTTTCTTGACCCATAAGCAATGTTGTTCCCT CCTCTTCGTTCCCTCTTTCTCTTCACCCTCTTGCTCTCCTCCGTTTGTTTCTTACAAATC AAAGCAGACCACGACGATGAAAGCGACTTGGGCAGTGATATCAAAGTAGACAAACGTCTC AAGTTCGAGAACCCGAAGCTACGTCAAGCCTACATTGCTCTTCAATCATGGAAAAAAGCA ATCTTTTCTGATCCTTTCAACTTCACAGCTAATTGGAATGGTTCAGATGTTTGCTCCTAC AATGGAATCTATTGTGCTCCTTCTCCTTCATACCCGAAAACCCGAGTCGTTGCTGGCATT GACCTCAACCACGCTGACATGGCCGGTTACTTGGCTTCCGAGCTAGGTCTCCTCTCTGAT CTCGCTCTGTTCCACATTAACTCAAACCGTTTCTGCGGTGAAGTCCCTCTCACGTTTAAC CGCATGAAGCTTCTCTACGAGCTTGATCTTAGCAACAACCGATTCGTCGGTAAGTTCCCT AAGGTTGTCCTCTCTTTGCCTTCCCTTAAATTCTTGGATCTCCGCTACAACGAGTTTGAA GGCAAGATCCCATCAAAGCTCTTCGATAGAGAGCTTGACGCTATATTCTTGAACCATAAC CGGTTCCGGTTCGGGATTCCCAAAAACATGGGAAATTCCCCTGTTTCTGCTCTGGTTCTT GCGGACAACAATCTCGGAGGATGCATACCGGGAAGTATCGGTCAAATGGGGAAAACACTC AACGAGCTTATCCTCTCCAACGACAACTTAACCGGTTGTTTACCTCCTCAGATCGGAAAC CTCAAGAAAGTGACGGTTTTCGACATCACTTCAAACCGTCTACAAGGTCCGTTACCATCT AGCGTTGGTAACATGAAGAGCCTAGAAGAGCTTCACGTGGCTAACAATGCCTTCACAGGA GTTATTCCTCCAAGTATCTGCCAGCTTTCTAACCTTGAGAACTTTACTTACTCTTCCAAC TACTTCTCCGGTCGTCCTCCTATATGCGCAGCTAGTTTGTTAGCCGACATTGTGGTGAAC GGTACCATGAACTGCATCACCGGTTTGGCTCGTCAAAGATCGGATAAACAGTGCTCATCT TTGCTTGCTCGCCCTGTGGATTGCAGTAAGTTTGGATGTTACAACATCTTCTCTCCACCA CCACCGACGTTTAAGATGTCACCTGAAGTCCGGACACTTCCTCCACCGATTTACGTGTAC TCATCGCCTCCTCCACCACCGTCGTCAAAGATGTCCCCTACCGTCAGAGCATACTCTCCC CCACCACCACCTTCGTCCAAGATGTCACCCTCTGTCAGAGCATATTCACCACCACCGCCT CCTTATTCCAAGATGTCACCTAGCGTTCGAGCTTACCCTCCTCCACCACCACCATCACCA TCTCCCCCACCGCCTTACGTATACTCATCTCCTCCACCGCCCTATGTGTACTCATCTCCT CCTCCACCGCCGTATGTGTATTCATCCCCTCCTCCACCGCCTTACGTATACTCATCTCCT CCACCGCCTTACGTGTACTCATCTCCACCCCCGCCTTACGTATACTCATCTCCACCTCCG CCTCCTCCAAGTCCACCACCACCGTGTCCTGAATCATCTCCACCACCGCCTGTTGTATAC TACGCACCCGTGACACAAAGCCCTCCACCACCATCACCGGTATACTATCCACCAGTAACA CAAAGCCCTCCACCACCATCGCCAGTATACTACCCACCGGTGACAAACAGTCCACCACCA CCATCACCGGTATACTATCCCCCAGTAACATACAGTCCACCACCACCATCACCAGTTTAC TATCCCCAAGTAACACCAAGTCCTCCACCACCATCGCCGCTATACTATCCCCCAGTAACA CCAAGTCCACCACCACCATCACCAGTTTACTATCCCCCAGTAACACCAAGTCCTCCACCA CCATCACCAGTTTACTATCCCCCAGTAACACCAAGTCCTCCACCACCATCACCAGTTTAC TATCCATCGGAAACACAAAGTCCTCCACCACCTACTGAGTACTACTATTCACCAAGCCAG TCTCCGCCACCAACAAAAGCATGTAAAGAAGGCCATCCACCACAAGCAACACCAAGTTAC GAACCACCTCCAGAATATTCATACTCATCATCACCACCACCACCATCTCCTACGTCCTAC TTTCCACCGATGCCAAGCGTCTCATATGATGCATCTCCTCCTCCTCCTCCGTCTTACTAC TAGTTTCAACCATTGAGTAAAAAAATGCATTGCCTTATGATTAACGAGACTACTCACAAT TATATTCTTTTGGCTGCGAGACTTTAATTTGTGTGTTTTGTTGATTTAAAGAAAAAAAGA CATTCCAGTTACTTTTTCTTGTAATATTTTTTTTTCTTTTGGATATTATGTTCTTTTTTC CCTAACACAGAGCTGCTCATTAGCAGCAATGGAGTATATAGTTTCAGTTTATTTAATTTG ATACTAAAATGTTCTGTATAAATAATAAAGAAAATAATAAATCCTTTCAC