Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G11720.2
CDS Infomation	\| starch synthase 3 \| Chr1:3951597-3956840 FORWARD LENGTH=3285 \| 201606
Sequence	ATGGAAGTGTGTTGGCAGATACAGAGACCAGCGAGTCTCAGACCGGGTTTTCAGGAAAAG GGTCGGGTCAAGATCAATACTTTTTCTGTTGGGTTTTTTCCTCGCTCCATTTCTAGTATT GCTTCATTGGAAAGTCAATACAAATCAAATGGGTTTCTGCATCAGATCACGGCAAGTGCA GACTTTTCAAGGAAGAAGCAAGGAAGAATGGCTGCTTCAGGACCAAAAAGCTCAGGTCCC AGAGGTTTTGGGCGACGAACAACAGTAGGAAGTGCTCAGAAAAGAACTCAGAAGAAGAAT GGTGAAAAAGATAGTAATGCCACTTCTACAGCAACAAACGAGGTTTCAGGGATTAGTAAG TTGCCCGCAGCTAAAGTGGATGTACAGAAGCAAAGCTCTGTTGTTTTGAATGAGAGAAAT GTGTTAGATAGGTCGGATATTGAGGATGGAAGTGATCGTTTGGACAAGAAAACAACCGAT GATGATGATTTGTTAGAACAAAAGTTAAAACTTGAAAGAGAGAATCTTCGTAGGAAGGAA ATAGAAACGCTTGCAGCGGAAAATTTGGCGAGAGGTGATAGAATGTTTGTGTATCCCGTT ATTGTGAAACCTGATGAAGACATAGAAGTGTTTCTCAACAGGAATCTGTCGACTCTGAAT AACGAACCCGATGTTTTGATCATGGGGGCGTTTAACGAATGGAGATGGAAGTCTTTCACA AGGAGATTGGAAAAGACCTGGATCCATGAAGATTGGTTGTCATGTCTCCTTCATATCCCC AAAGAAGCGTATAAGATGGACTTCGTGTTTTTCAATGGGCAAAGTGTATATGACAACAAT GACTCAAAAGATTTTTGTGTAGAGATAAAAGGTGGGATGGATAAAGTTGACTTTGAGAAT TTTCTTCTAGAAGAGAAACTGCGAGAGCAAGAGAAGTTAGCCAAGGAAGAAGCTGAGAGG GAGAGGCAAAAAGAAGAGAAGAGAAGAATCGAAGCTCAAAAGGCTGCAATTGAAGCTGAT AGAGCACAAGCAAAGGCGGAGACTCAGAAGAGACGTGAATTGCTTCAACCGGCTATTAAG AAAGCTGTAGTCTCGGCTGAGAATGTTTGGTACATTGAGCCGAGTGATTTCAAGGCTGAA GATACAGTGAAGCTATATTACAATAAAAGGTCAGGTCCTCTGACTAATTCCAAAGAACTG TGGTTACATGGAGGGTTTAATAATTGGGTTGATGGATTATCTATCGTTGTAAAGCTTGTT AATGCTGAGTTAAAGGATGTTGATCCAAAGAGCGGAAATTGGTGGTTCGCTGAAGTTGTA GTGCCTGGCGGTGCACTAGTCATTGACTGGGTCTTTGCTGATGGACCACCTAAAGGAGCG TTTCTGTATGACAATAATGGTTACCAAGACTTCCACGCACTTGTTCCTCAAAAACTTCCT GAAGAACTTTACTGGTTAGAGGAAGAAAATATGATTTTTAGAAAACTTCAGGAGGATAGG CGGTTAAAAGAGGAAGTTATGCGTGCCAAGATGGAAAAAACAGCTCGCTTGAAAGCTGAA ACTAAGGAAAGAACACTGAAAAAGTTTCTGCTATCCCAGAAAGACGTGGTTTACACCGAG CCTCTAGAGATTCAAGCAGGAAACCCTGTGACTGTATTGTACAATCCTGCAAACACGGTT TTGAATGGAAAACCTGAAGTTTGGTTTAGAGGCTCTTTTAATCGTTGGACTCACCGCTTG GGCCCTTTGCCACCTCAGAAAATGGAAGCAACAGATGATGAAAGCTCACATGTGAAGACT ACGGCTAAGGTCCCATTGGATGCTTACATGATGGACTTTGTGTTCTCTGAGAAAGAGGAT GGCGGAATATTTGATAACAAAAATGGTCTGGATTACCATTTACCAGTCGTGGGAGGTATT TCAAAGGAACCACCATTGCACATTGTTCATATTGCTGTTGAAATGGCACCCATCGCAAAG GTTGGTGGCCTAGGTGATGTTGTCACTAGTCTATCTCGCGCTGTTCAAGAATTAAACCAT AATGTGGATATAGTTTTTCCAAAGTATGATTGCATAAAGCACAATTTTGTGAAGGACTTG CAATTTAACAGAAGCTATCACTGGGGAGGAACTGAAATAAAAGTTTGGCATGGAAAAGTA GAAGGCCTTTCGGTTTACTTCTTAGATCCACAAAATGGATTGTTTCAGCGAGGATGTGTT TACGGTTGTGCAGATGATGCAGGAAGATTCGGTTTCTTCTGTCATGCGGCTCTTGAATTT CTTCTCCAAGGAGGTTTCCATCCAGACATTCTTCACTGTCATGACTGGTCTAGTGCTCCG GTTTCATGGTTATTCAAGGATCATTACACACAGTACGGTTTAATTAAAACCCGTATTGTC TTCACAATTCATAATTTGGAATTTGGAGCGAATGCCATTGGTAAAGCAATGACATTTGCA GACAAAGCCACAACGGTTTCACCAACTTATGCTAAGGAAGTTGCTGGAAACTCTGTAATC TCTGCACATTTATACAAATTTCACGGAATTATAAACGGGATTGACCCAGATATATGGGAT CCATATAACGATAACTTTATTCCCGTACCTTATACTTCAGAGAACGTTGTAGAAGGCAAA AGAGCAGCCAAGGAAGAATTGCAAAACAGGCTTGGACTAAAGAGTGCCGATTTTCCAGTA GTAGGAATTATTACGCGCTTAACACACCAGAAGGGAATACATTTGATCAAGCACGCTATT TGGCGTACCTTGGAACGGAATGGACAGGTTGTCTTATTAGGTTCAGCTCCAGATCCTCGG ATCCAAAATGATTTTGTAAACTTGGCAAACCAATTACATTCTTCTCATGGTGACCGGGCT CGGCTTGTTCTAACCTACGATGAACCTCTTTCCCATTTGATTTATGCTGGGGCTGACTTT ATTCTTGTACCGTCGATATTTGAGCCATGTGGACTGACACAGCTCATAGCCATGAGATAC GGCGCTGTTCCTGTTGTTAGAAAAACTGGAGGACTCTTTGATACGGTTTTTGATGTTGAC CACGATAAAGAAAGGGCACAAGCTCAAGTTCTAGAACCTAATGGTTTCAGCTTCGACGGA GCTGATGCTCCTGGTGTTGATTATGCTCTCAATAGGGCGATATCGGCGTGGTACGATGGT AGAGAGTGGTTTAACTCGCTGTGCAAGACGGTGATGGAGCAAGACTGGTCATGGAACCGT CCTGCACTTGAGTATCTTGAGCTCTATCACTCTGCACGCAAGTAA

Peptide Sequence

PEP ID	AT1G11720.2
PEP Infomation	\| starch synthase 3 \| Chr1:3951597-3956840 FORWARD LENGTH=1094 \| 201606
Sequence	MEVCWQIQRPASLRPGFQEKGRVKINTFSVGFFPRSISSIASLESQYKSNGFLHQITASA DFSRKKQGRMAASGPKSSGPRGFGRRTTVGSAQKRTQKKNGEKDSNATSTATNEVSGISK LPAAKVDVQKQSSVVLNERNVLDRSDIEDGSDRLDKKTTDDDDLLEQKLKLERENLRRKE IETLAAENLARGDRMFVYPVIVKPDEDIEVFLNRNLSTLNNEPDVLIMGAFNEWRWKSFT RRLEKTWIHEDWLSCLLHIPKEAYKMDFVFFNGQSVYDNNDSKDFCVEIKGGMDKVDFEN FLLEEKLREQEKLAKEEAERERQKEEKRRIEAQKAAIEADRAQAKAETQKRRELLQPAIK KAVVSAENVWYIEPSDFKAEDTVKLYYNKRSGPLTNSKELWLHGGFNNWVDGLSIVVKLV NAELKDVDPKSGNWWFAEVVVPGGALVIDWVFADGPPKGAFLYDNNGYQDFHALVPQKLP EELYWLEEENMIFRKLQEDRRLKEEVMRAKMEKTARLKAETKERTLKKFLLSQKDVVYTE PLEIQAGNPVTVLYNPANTVLNGKPEVWFRGSFNRWTHRLGPLPPQKMEATDDESSHVKT TAKVPLDAYMMDFVFSEKEDGGIFDNKNGLDYHLPVVGGISKEPPLHIVHIAVEMAPIAK VGGLGDVVTSLSRAVQELNHNVDIVFPKYDCIKHNFVKDLQFNRSYHWGGTEIKVWHGKV EGLSVYFLDPQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILHCHDWSSAP VSWLFKDHYTQYGLIKTRIVFTIHNLEFGANAIGKAMTFADKATTVSPTYAKEVAGNSVI SAHLYKFHGIINGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEELQNRLGLKSADFPV VGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHGDRA RLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGAVPVVRKTGGLFDTVFDVD HDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNR PALEYLELYHSARK

Transcript Sequence

Transcript ID	AT1G11720.2
Transcript Infomation	\| starch synthase 3 \| Chr1:3951366-3957044 FORWARD LENGTH=3720 \| 201606
Sequence	TGTATTCTCTGAATAAATTGGAATAAAATAATGAATGAGATGAGTTTCAGACTTCGGTGA TTGAGAAGTGTGGTGTGGTGAGGCAGTGGAGTCAGGGGGCTGCTTCAACAACAAACATTC TCTCTCTCTTGTCTAAGCAAAGCAACCCATATAAGATATATACCTGAAGTACACGACCAC TTTCTTTCTCCATCTCGTCTCTCTTTCTGTCTTCTTCTTTCTTCGGCAGCTATGGAAGTG TGTTGGCAGATACAGAGACCAGCGAGTCTCAGACCGGGTTTTCAGGAAAAGGGTCGGGTC AAGATCAATACTTTTTCTGTTGGGTTTTTTCCTCGCTCCATTTCTAGTATTGCTTCATTG GAAAGTCAATACAAATCAAATGGGTTTCTGCATCAGATCACGGCAAGTGCAGACTTTTCA AGGAAGAAGCAAGGAAGAATGGCTGCTTCAGGACCAAAAAGCTCAGGTCCCAGAGGTTTT GGGCGACGAACAACAGTAGGAAGTGCTCAGAAAAGAACTCAGAAGAAGAATGGTGAAAAA GATAGTAATGCCACTTCTACAGCAACAAACGAGGTTTCAGGGATTAGTAAGTTGCCCGCA GCTAAAGTGGATGTACAGAAGCAAAGCTCTGTTGTTTTGAATGAGAGAAATGTGTTAGAT AGGTCGGATATTGAGGATGGAAGTGATCGTTTGGACAAGAAAACAACCGATGATGATGAT TTGTTAGAACAAAAGTTAAAACTTGAAAGAGAGAATCTTCGTAGGAAGGAAATAGAAACG CTTGCAGCGGAAAATTTGGCGAGAGGTGATAGAATGTTTGTGTATCCCGTTATTGTGAAA CCTGATGAAGACATAGAAGTGTTTCTCAACAGGAATCTGTCGACTCTGAATAACGAACCC GATGTTTTGATCATGGGGGCGTTTAACGAATGGAGATGGAAGTCTTTCACAAGGAGATTG GAAAAGACCTGGATCCATGAAGATTGGTTGTCATGTCTCCTTCATATCCCCAAAGAAGCG TATAAGATGGACTTCGTGTTTTTCAATGGGCAAAGTGTATATGACAACAATGACTCAAAA GATTTTTGTGTAGAGATAAAAGGTGGGATGGATAAAGTTGACTTTGAGAATTTTCTTCTA GAAGAGAAACTGCGAGAGCAAGAGAAGTTAGCCAAGGAAGAAGCTGAGAGGGAGAGGCAA AAAGAAGAGAAGAGAAGAATCGAAGCTCAAAAGGCTGCAATTGAAGCTGATAGAGCACAA GCAAAGGCGGAGACTCAGAAGAGACGTGAATTGCTTCAACCGGCTATTAAGAAAGCTGTA GTCTCGGCTGAGAATGTTTGGTACATTGAGCCGAGTGATTTCAAGGCTGAAGATACAGTG AAGCTATATTACAATAAAAGGTCAGGTCCTCTGACTAATTCCAAAGAACTGTGGTTACAT GGAGGGTTTAATAATTGGGTTGATGGATTATCTATCGTTGTAAAGCTTGTTAATGCTGAG TTAAAGGATGTTGATCCAAAGAGCGGAAATTGGTGGTTCGCTGAAGTTGTAGTGCCTGGC GGTGCACTAGTCATTGACTGGGTCTTTGCTGATGGACCACCTAAAGGAGCGTTTCTGTAT GACAATAATGGTTACCAAGACTTCCACGCACTTGTTCCTCAAAAACTTCCTGAAGAACTT TACTGGTTAGAGGAAGAAAATATGATTTTTAGAAAACTTCAGGAGGATAGGCGGTTAAAA GAGGAAGTTATGCGTGCCAAGATGGAAAAAACAGCTCGCTTGAAAGCTGAAACTAAGGAA AGAACACTGAAAAAGTTTCTGCTATCCCAGAAAGACGTGGTTTACACCGAGCCTCTAGAG ATTCAAGCAGGAAACCCTGTGACTGTATTGTACAATCCTGCAAACACGGTTTTGAATGGA AAACCTGAAGTTTGGTTTAGAGGCTCTTTTAATCGTTGGACTCACCGCTTGGGCCCTTTG CCACCTCAGAAAATGGAAGCAACAGATGATGAAAGCTCACATGTGAAGACTACGGCTAAG GTCCCATTGGATGCTTACATGATGGACTTTGTGTTCTCTGAGAAAGAGGATGGCGGAATA TTTGATAACAAAAATGGTCTGGATTACCATTTACCAGTCGTGGGAGGTATTTCAAAGGAA CCACCATTGCACATTGTTCATATTGCTGTTGAAATGGCACCCATCGCAAAGGTTGGTGGC CTAGGTGATGTTGTCACTAGTCTATCTCGCGCTGTTCAAGAATTAAACCATAATGTGGAT ATAGTTTTTCCAAAGTATGATTGCATAAAGCACAATTTTGTGAAGGACTTGCAATTTAAC AGAAGCTATCACTGGGGAGGAACTGAAATAAAAGTTTGGCATGGAAAAGTAGAAGGCCTT TCGGTTTACTTCTTAGATCCACAAAATGGATTGTTTCAGCGAGGATGTGTTTACGGTTGT GCAGATGATGCAGGAAGATTCGGTTTCTTCTGTCATGCGGCTCTTGAATTTCTTCTCCAA GGAGGTTTCCATCCAGACATTCTTCACTGTCATGACTGGTCTAGTGCTCCGGTTTCATGG TTATTCAAGGATCATTACACACAGTACGGTTTAATTAAAACCCGTATTGTCTTCACAATT CATAATTTGGAATTTGGAGCGAATGCCATTGGTAAAGCAATGACATTTGCAGACAAAGCC ACAACGGTTTCACCAACTTATGCTAAGGAAGTTGCTGGAAACTCTGTAATCTCTGCACAT TTATACAAATTTCACGGAATTATAAACGGGATTGACCCAGATATATGGGATCCATATAAC GATAACTTTATTCCCGTACCTTATACTTCAGAGAACGTTGTAGAAGGCAAAAGAGCAGCC AAGGAAGAATTGCAAAACAGGCTTGGACTAAAGAGTGCCGATTTTCCAGTAGTAGGAATT ATTACGCGCTTAACACACCAGAAGGGAATACATTTGATCAAGCACGCTATTTGGCGTACC TTGGAACGGAATGGACAGGTTGTCTTATTAGGTTCAGCTCCAGATCCTCGGATCCAAAAT GATTTTGTAAACTTGGCAAACCAATTACATTCTTCTCATGGTGACCGGGCTCGGCTTGTT CTAACCTACGATGAACCTCTTTCCCATTTGATTTATGCTGGGGCTGACTTTATTCTTGTA CCGTCGATATTTGAGCCATGTGGACTGACACAGCTCATAGCCATGAGATACGGCGCTGTT CCTGTTGTTAGAAAAACTGGAGGACTCTTTGATACGGTTTTTGATGTTGACCACGATAAA GAAAGGGCACAAGCTCAAGTTCTAGAACCTAATGGTTTCAGCTTCGACGGAGCTGATGCT CCTGGTGTTGATTATGCTCTCAATAGGGCGATATCGGCGTGGTACGATGGTAGAGAGTGG TTTAACTCGCTGTGCAAGACGGTGATGGAGCAAGACTGGTCATGGAACCGTCCTGCACTT GAGTATCTTGAGCTCTATCACTCTGCACGCAAGTAAGACCAAATAAAATGGAAGCTCTAA GATGAATTCTCTTTGTATGTACAGAAATTAGCTTATGAGACAACTTAGAGAGTTTGATCC TTTCTTCTTCTTTTACATTCCCAAAGCAATATAAAAAACGTGATAGGTCTATGGATTCTG CTTTTGTAATTCTGAATAAATCAAAAGTTAAGCAAAGTTTATACACACACTGTTAGTACT