Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G11070.4
CDS Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:3690406-3693651 REVERSE LENGTH=2241 \| 201606
Sequence	ATGATGAGTGTGAAAACCTGTAAAGTTGAGCCTTTAAAAGGGCAAACACCACTTAGAAGT AGCAAGACCAAACAGGATGCTAAACCTTATTCGTGTTCTTCACCACCATCCATCAAGGCG TATACATCTCCATTCGTAAGCCAAAAGACTTCAAGACGTGTTGCTTTGTCTGCTGAAGAT ATCAAGAATGCTCATAGAGAAGCGACAAAGATCTCGAGTTCGAGCTGTGGATCAAGCAAA TGGACAGGAAATTTCATTCTCATGGTGGAGCTTCGAAGAAAGATTATCAATTTTAGAACC ATCATTGATCTTCCTCCTCTGACCTATTATCTCTCTATATCCAATATGGTGATGCGTACG ATGAAAGATCTCCATAAGCTCTGTCCTGAGATCATTGACAGCTCCCAAATCCTCGAAATG AGACGTGAAGAAGTTGACAAGTTGCTTGACAATTTCTACAACGCTTTGAAATCAATTGGA GATTCATGGATCGATGACCACGAATGGATCATCAAATCCAAGTATAGAAGCAGTAACATA AGGAAGAATCTGTCTGATCGACTTGTGGAAAAGGTGTTAGCTGCATTAGATGGACTGATT AAGGGGATGAACGAGAGGCTTAATACGACAGAGAACGGCAATGTGGAAATGAAGAAAAAG GTTAGTCCGCGGAGTACTAAAACATCAAATGACCGATCAGAATCATTGGCGAAGCAACCG ATCAGGCCAAAAACGGTGCTGAGTCCACCGAGTAAAGTCCATGGAGACTTTTCAATCTCT GTGTCAAATCTTCCTAGAAATGTGAGAATGCAAGCGCTTGTAAAGCTGAGTCCTATCGAT GTAAAGCGACTCGCTATCCAAAATTTTAGTCAGAAAGAAGCTCTGAGCAATAATGGTGAT GGTGATGATGAGAGTCTCAAAGTGAAGAAGAGTGAAACAGAGGAGAAAGCAAAAGAAGCT ATTCTTGAGAAACAAGATAGTGTGAAGAGTCAGATTGATGATAAAGATTGCTCAAAAGTT TCAGTGAAATCTGAAATGGTTTCAAAATCTTTTGCTCCGCCTCCTCCACCACCTCCAGGG AATGCAGCAATCCCGGTGGAACCACCACTTACAATGTCTGCTGAAAAAGAGTCGTATGCT CCGCTTCCTCCACCTCCCGGAAGAGCAGCACTACCACCGCCACCGCCACTTCCAATGGCT GTGAGAAAAGGAGTGGCTGCTCCGCCTCTTCCACCTCCAGGGACTGCAGCACTACCTCCA CCACCGCCACTTCCAATGGCTGCCGGAAAAGGAGTGGCTGCTCCACCACCTCCTCCACCT GGCGCAAGAGGAGGCTTGGGAGCGAAGAAAGTAACTAGTAAACTGAAGAGATCAACCCAT TTAGGGGCCCTATTTAGATTCCTCAAGGGGAAACTAGAAGGGAAGAATCCAGAAGTAAGA TCTCGTGGCGCTGGAGGAGGAAGTAAAGGCGCGACTGGAAGCGCTCCAGCCAGCGGAAAG CAAGGAATGGCTGATGCTCTTGCTGAGATAACAAAGAAGTCTCCTTATTTTCAGAAGATA GAAGAGGATGTTCGAATGTATATGACTTCAATCAATGAGCTTAAGACAGATATTACAAAG TTCAAGAACAAGGACATTACCGAGCTTCAAAAATTTCACCATCGTATTGAATCAGTTCTT GAGAAACTAGAAGATGAAACACAGGTTCTAGCAAGATGTGAAGGATTCCCGCATAAGAAA CTCGAAGCAATAAGAATGGCTGCTGCATTATACTCGAAGCTGGAGGGTATGATCAAAGAG CTAAAGAACTGGAAGATAGAGTCTCCGGCGAACCAACTTTACGATAAGACTGAGCGTTAC TTTGCAAAGATCAGAAAAGAGATTGAAACTCTAGACCAGATCAAAGCAGAAGAGGAAAAG AAGTTCAAGAGCAATAACATCCATTTCGACTTCAACATCCTTGTTCAGATCAAGGAATTA ATGGTTGATATCTCTTCAGGCTGTATGGAACTGGCATTGAAGGAAAAGAGAGAAGCAAAG ATTGCATCGCAAACTACTGCAGAATCACTCGAGGCAAAGCCAAGCACGAAGAATAAGACT CCAGGATGGGCTAAAACGTTGTGGAGGGCATTTCATTTTGCATACAGAGTTTACACATTT GCTGGTGGGCACGACGATCGTGCTGATAAGCTTACAAGAGAGTTGGCTGAGGAGATCGAG CAGATTCTTGGAAACCAATGA

Peptide Sequence

PEP ID	AT1G11070.4
PEP Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:3690406-3693651 REVERSE LENGTH=746 \| 201606
Sequence	MMSVKTCKVEPLKGQTPLRSSKTKQDAKPYSCSSPPSIKAYTSPFVSQKTSRRVALSAED IKNAHREATKISSSSCGSSKWTGNFILMVELRRKIINFRTIIDLPPLTYYLSISNMVMRT MKDLHKLCPEIIDSSQILEMRREEVDKLLDNFYNALKSIGDSWIDDHEWIIKSKYRSSNI RKNLSDRLVEKVLAALDGLIKGMNERLNTTENGNVEMKKKVSPRSTKTSNDRSESLAKQP IRPKTVLSPPSKVHGDFSISVSNLPRNVRMQALVKLSPIDVKRLAIQNFSQKEALSNNGD GDDESLKVKKSETEEKAKEAILEKQDSVKSQIDDKDCSKVSVKSEMVSKSFAPPPPPPPG NAAIPVEPPLTMSAEKESYAPLPPPPGRAALPPPPPLPMAVRKGVAAPPLPPPGTAALPP PPPLPMAAGKGVAAPPPPPPGARGGLGAKKVTSKLKRSTHLGALFRFLKGKLEGKNPEVR SRGAGGGSKGATGSAPASGKQGMADALAEITKKSPYFQKIEEDVRMYMTSINELKTDITK FKNKDITELQKFHHRIESVLEKLEDETQVLARCEGFPHKKLEAIRMAAALYSKLEGMIKE LKNWKIESPANQLYDKTERYFAKIRKEIETLDQIKAEEEKKFKSNNIHFDFNILVQIKEL MVDISSGCMELALKEKREAKIASQTTAESLEAKPSTKNKTPGWAKTLWRAFHFAYRVYTF AGGHDDRADKLTRELAEEIEQILGNQ

Transcript Sequence

Transcript ID	AT1G11070.4
Transcript Infomation	\| hydroxyproline-rich glycoprotein family protein \| Chr1:3690012-3694200 REVERSE LENGTH=3184 \| 201606
Sequence	ACAGTACTCTGATTTCAAGTAAAATAATAATAATAATACTACACATACTTATTTTTTATA CTTGGAGCCTAAAATTTACGGCCGCACGAACGGAGTGCACGTTTGCTTCTGTCACATGTT TGTTTGTCCGAGTTTTTGCTCTTGCATACTGCCGTTGTAAAAAGTTGGAAAGAAAATAAT CTTAACTTTTCAATTTCAAATTAGAAATGAAATCAAAGAAATTGGAGCTTGACTTGTCTT TTTATAGATATCCTCCTTTTACCTATTTTACTATACTCAATTCTTCTATTTTTAGGATCC TTCTGAAAATTAAATTAATTTTTCCATTTATGTTTGTAGTTTCTTATTTCTGACAAAACA AATGTTGGAAAAAATCTATCCTTAGATGCCACGTGTAGCTATTCGATAAGTGATAAGATT CAGTATTATCTGGAGCGTTAGCGTTAAATAACACTCTTAAGCTTCACATGTTTTATCGCT TACACTCAAATTAAGTCTATGTAATTACAAAATTACAACACTCTCTCCATCTCTTTGTTT TCTCCGCAGATGATGAGTGTGAAAACCTGTAAAGTTGAGCCTTTAAAAGGGCAAACACCA CTTAGAAGTAGCAAGACCAAACAGGATGCTAAACCTTATTCGTGTTCTTCACCACCATCC ATCAAGGCGTATACATCTCCATTCGTAAGCCAAAAGACTTCAAGACGTGTTGCTTTGTCT GCTGAAGATATCAAGAATGCTCATAGAGAAGCGACAAAGATCTCGAGTTCGAGCTGTGGA TCAAGCAAATGGACAGGAAATTTCATTCTCATGGTGGAGCTTCGAAGAAAGATTATCAAT TTTAGAACCATCATTGATCTTCCTCCTCTGACCTATTATCTCTCTATATCCAATATGGTG ATGCGTACGATGAAAGATCTCCATAAGCTCTGTCCTGAGATCATTGACAGCTCCCAAATC CTCGAAATGAGACGTGAAGAAGTTGACAAGTTGCTTGACAATTTCTACAACGCTTTGAAA TCAATTGGAGATTCATGGATCGATGACCACGAATGGATCATCAAATCCAAGTATAGAAGC AGTAACATAAGGAAGAATCTGTCTGATCGACTTGTGGAAAAGGTGTTAGCTGCATTAGAT GGACTGATTAAGGGGATGAACGAGAGGCTTAATACGACAGAGAACGGCAATGTGGAAATG AAGAAAAAGGTTAGTCCGCGGAGTACTAAAACATCAAATGACCGATCAGAATCATTGGCG AAGCAACCGATCAGGCCAAAAACGGTGCTGAGTCCACCGAGTAAAGTCCATGGAGACTTT TCAATCTCTGTGTCAAATCTTCCTAGAAATGTGAGAATGCAAGCGCTTGTAAAGCTGAGT CCTATCGATGTAAAGCGACTCGCTATCCAAAATTTTAGTCAGAAAGAAGCTCTGAGCAAT AATGGTGATGGTGATGATGAGAGTCTCAAAGTGAAGAAGAGTGAAACAGAGGAGAAAGCA AAAGAAGCTATTCTTGAGAAACAAGATAGTGTGAAGAGTCAGATTGATGATAAAGATTGC TCAAAAGTTTCAGTGAAATCTGAAATGGTTTCAAAATCTTTTGCTCCGCCTCCTCCACCA CCTCCAGGGAATGCAGCAATCCCGGTGGAACCACCACTTACAATGTCTGCTGAAAAAGAG TCGTATGCTCCGCTTCCTCCACCTCCCGGAAGAGCAGCACTACCACCGCCACCGCCACTT CCAATGGCTGTGAGAAAAGGAGTGGCTGCTCCGCCTCTTCCACCTCCAGGGACTGCAGCA CTACCTCCACCACCGCCACTTCCAATGGCTGCCGGAAAAGGAGTGGCTGCTCCACCACCT CCTCCACCTGGCGCAAGAGGAGGCTTGGGAGCGAAGAAAGTAACTAGTAAACTGAAGAGA TCAACCCATTTAGGGGCCCTATTTAGATTCCTCAAGGGGAAACTAGAAGGGAAGAATCCA GAAGTAAGATCTCGTGGCGCTGGAGGAGGAAGTAAAGGCGCGACTGGAAGCGCTCCAGCC AGCGGAAAGCAAGGAATGGCTGATGCTCTTGCTGAGATAACAAAGAAGTCTCCTTATTTT CAGAAGATAGAAGAGGATGTTCGAATGTATATGACTTCAATCAATGAGCTTAAGACAGAT ATTACAAAGTTCAAGAACAAGGACATTACCGAGCTTCAAAAATTTCACCATCGTATTGAA TCAGTTCTTGAGAAACTAGAAGATGAAACACAGGTTCTAGCAAGATGTGAAGGATTCCCG CATAAGAAACTCGAAGCAATAAGAATGGCTGCTGCATTATACTCGAAGCTGGAGGGTATG ATCAAAGAGCTAAAGAACTGGAAGATAGAGTCTCCGGCGAACCAACTTTACGATAAGACT GAGCGTTACTTTGCAAAGATCAGAAAAGAGATTGAAACTCTAGACCAGATCAAAGCAGAA GAGGAAAAGAAGTTCAAGAGCAATAACATCCATTTCGACTTCAACATCCTTGTTCAGATC AAGGAATTAATGGTTGATATCTCTTCAGGCTGTATGGAACTGGCATTGAAGGAAAAGAGA GAAGCAAAGATTGCATCGCAAACTACTGCAGAATCACTCGAGGCAAAGCCAAGCACGAAG AATAAGACTCCAGGATGGGCTAAAACGTTGTGGAGGGCATTTCATTTTGCATACAGAGTT TACACATTTGCTGGTGGGCACGACGATCGTGCTGATAAGCTTACAAGAGAGTTGGCTGAG GAGATCGAGCAGATTCTTGGAAACCAATGACTTGTGACTTATGTCTCGGCTGAAAATGTC ACAAAGGTATTGGAGTCTTTATAGAAGACAGTTATTAAAGAGAATAAGTGATTTAGGTTA ACATGTTGTAATGTAGTTAGTTACCAAAAAGCTGTTGTACTCTGATAAGTCTTCTCACTG TATGACTGCACCTATAAAAAAGAAAATAGCATATCAAGGTTACCAAAACATATCCTAGCT ATCGAATCCAGGGAATTAAACACTTGAGGACGACAGATCTCAGTATTGAACCGAGGTAGG AAAACTGGGAACTTCCGTGTGACAATATGGCAAGCTCTAGCCAGAGACAGATGCAGAGCT CGAGGAATGGCGACAGTGAGAGAAGAAGCCAAGAGGAAAGGAAACAGAACAAACCAAGAA CAAG