Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G10450.3
CDS Infomation	\| paired amphipathic helix Sin3-like protein \| Chr1:3432160-3437979 FORWARD LENGTH=3522 \| 201606
Sequence	ATGAGAGATCTATTACTTGGGACAACGATTCCGAGCTATTTCTCTTGGCTTGGACTATTT CCACGGTTCTTAGTTTGGTTTGGCTTCTTAAAAGCCTCTTTTTTTTGTTCTTCCAGAAAT CAGTCTGCGGGAGAAAGTGGAAGAAGACTGAAGATGAAGAGAGCTAGAGAAGATGTTCAC ACTGACACTCAAAAGCGAAAGCCTGAAGTTTCGTCTCGAGGAGAAACAAACAAGCTACCT CGAACCATCGATGCCCTAACGTATCTCAAAGCTGTGAAGGATATTTTTCACGACAATAAA GAGAAATATGAGTCATTCCTGGAGCTCATGAAGGAGTTCAAAGCTCAGACAATCGACACT AATGGTGTCATAGAAAGGATTAAAGTGTTGTTCAAGGGTTACAGGGACCTACTTTTGGGT TTTAATACTTTCTTGCCCAAAGGGTATAAAATAACCCTTCTGCCAGAGGAAGAGAAGCCT AAGATCCGGGTGGATTTCAAAGACGCTATCGGTTTCGTCACCAAGATTAAGACGAGGTTT GGAGATGATGAACATGCGTATAAACGGTTTCTAGACATCTTGAACTTGTATAGAAAGGAG AAAAAGTCCATCTCTGAGGTCTACGAAGAGGTTACTATGTTATTCAAGGGTCATGAAGAT CTGCTTATGGAGTTCGTTAATTTCTTACCTAATTGTCCAGAATCAGCTCCCTCGACAAAG AATGCAGTACCGCGTCACAAGGGCACTGCAACTACTGCCATGCATTCTGATAAGAAAAGA AAACAACGATGTAAGCTTGAGGATTATTCTGGACACTCTGATCAACGAGAAGATGGTGAT GAGAATCTTGTCACTTGCTCCGCTGACTCCCCTGTCGGGGAAGGTCAGCCAGGATACTTT CGAGATTATGAAAATAGAGAAGATACTGAAACAGATACAGCAGATAGAACTGAAAAAAGT GCAGCATCTGGCAGTCAAGATATCGGAAATCACAAATCGACTACCAAGTATGTGGGAACA CCTATAAATGAGCTTGATCTTTCTGAATGCACTCAGTGTACCCCAAGTTATCGACTCCTG CCAAAGGATTATGCAGTTGAGATCCCAAGCTACAGAAATACACTTGGTAAAAAGACACTC AATGACCACTTGGTATCTGTCACTTCAGGGAGTGAAGATTACTCATTCAGTCATATGCGC AAAAACCAGTATGAAGAAAGCTTGTTTCGGTGTGAGGATGACAGGTATGAAATGGACATG TTACTAGGATCTGTAAGTTCAGCCATTAAACAGGTGGAAATCCTTCTCGAAAAGATGAAC AACAACACTATCTCAGTAGACTCTACTATATGTATCGAAAAACACTTATCAGCTATGAAC TTAAGATGCATTGAGCGGTTATACGGTGATAATGGGCTTGATGTCATGGATCTTTTGAAG AAGAATATGCATAGCGCTTTACCGGTGATACTAACGCGCTTGAAGCAGAAGCAAGAAGAA TGGGCAAGGTGCCATTCTGATTTCCAGAAAGTTTGGGCAGAAGTATATGCTAAGAATCAC CATAAGTCACTAGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAACTTGAGC ACAAAATGTTTAGTGGCAGAAGTGAAAGATATCAGTGAGAAAAAGCATCAAGAAGATCTG CTTCAAGCTATTGCTGTTAGAGTTATGCCCTTATTTACTCCTGATTTGGAGTTCAATTAT TGTGATACACAAATTCACGAGGATCTATATCTGCTAATCAAGTATTACTGTGAAGAAATA TGTGCCACTGAACAATCAGATAAGGTAATGAAGCTGTGGATAACCTTTTTGGAGCCCATC TTTGGCATTCTTTCGAGGTCTCAAGATAACCTTGCTCTGGAAGATGTGTCAAAGTTGAAA AACAACCGAGAATTGCAAGATGCATGTTTGGCAGTGAAGGAGACAGCTTCTGGGTCAAAC CGTAAACATCCAATATCCCCGAAACGACTGAGCAAAGATAATACAAAAATGCAAGGAAGT TCTTCTCGGGAAGATGTCTCAGCCAATATAAAAGTGAAAACTGCCCAGCCCGATAAGCTT CAGGATGATGCAGCTATGACTAATGAGGTTATCCAGTCTTCCAAATTTGTGTCACCCAAA AATGACCAGATAATGGAGGATGAAGGGAATCATATGGTTAACGCAGCATCGGTGGAAAAG CATGAGCTAGAAGAGGGTGAATTATCTCCCACCGCCAGTCGTGAGCAAAGCAACTTTGAG GTTAATGGACAGAATGCCTTCAAGCCTTTACAAAAGGTGACGGACAATGTAAGAAGCAAT AAAGACAAGCAAAGTTGTGATAAAAAGGGAGCAAAGAACAAAACTCGCGCTGAAGATGAC AAACAAGAAAATTGTCACAAGTTATCAGAGAATAATAAGACTGCCTCTGAAATGCTTGTT TCAGGAACCAAGGTTAGTTGTCATGAAGAGAACAACAGAGTTATGAACTGTAATGGGCGT GGTAGTGTGGCTGGAGAGATGGCTAATGGAAATCAAGGTGAAGATGGATCCTTCGCATTT TCAGAACGGTTTCTGCAAACTGTAAAACCTGTTGCCAAGCATCTGTCTTGGCCATTGCAA GCTAGTGAAACTTGCTCCCAGAATGATTCTCAAGTTTTTTACGGGAATGATTCCTATTAT GTGCTATTTAGGCTTCATCAAATGTTGTACGAGAGAATACAAACAGCAAAGAAACATTCA GAAAAGAAATGGAAGGCTGCAGATAACACGACTCCTGATTCTTATCCCAGGTTCATGGAT GCACTCTATAATTTACTTGACGGTTCTATTGACAATACAAAGTTTGAAGATGAGTGCCGA GCTATTTTTGGAGCACAGTCATATGTTCTTTTCACATTGGACAAGCTAGTTCAGAAGTTT GTTAAGCATCTCCATTCGGTTGCATCTGATGAAACAGACACCAAGCTTCTGCAACTACAT GCGTATGAGAACTACAGAAAACCTGGAAAATTCTTTGATCTAGTGTATCATGAGAATGCA TGTGCCCTCCTCCATGAGGCAAACATATACCGGATCAGATATTCATCAGAAGGAACACGT CTCTCGATTCAGCTTATGAACAGTGGGAACAATCAGCTTGAAGTAATGGGTGTAGCGATG GAGCCGGCATTTGCAGATTATCTACAAAATAAATGTCTGAAATCCGTCAATGATGAAGAG AATCACGGACTGTTTCTGAACAGGAACAAAAAGAAATTCACCAGCTTAGATGAATCTAGG GGGATGCCTGTTGCGATGGAAAGATTGAATATTATCAACGAGATGGAATGTAGGATGGCT TGCAGTTCTTCAAAGGTGAAGTACGTAGCAAATACATCAGATCTTTTGTACAGAAGCAAA CAGGGGAAACCGAATTCAAGAGTTAGTGAAATCTTGAAACAGAGAAGAATATCGCGGTTT CACATAATGCTGAATTGCAGACTTTGTGCCTTGCCTCTATAA

Peptide Sequence

PEP ID	AT1G10450.3
PEP Infomation	\| paired amphipathic helix Sin3-like protein \| Chr1:3432160-3437979 FORWARD LENGTH=1173 \| 201606
Sequence	MRDLLLGTTIPSYFSWLGLFPRFLVWFGFLKASFFCSSRNQSAGESGRRLKMKRAREDVH TDTQKRKPEVSSRGETNKLPRTIDALTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDT NGVIERIKVLFKGYRDLLLGFNTFLPKGYKITLLPEEEKPKIRVDFKDAIGFVTKIKTRF GDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEFVNFLPNCPESAPSTK NAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSDQREDGDENLVTCSADSPVGEGQPGYF RDYENREDTETDTADRTEKSAASGSQDIGNHKSTTKYVGTPINELDLSECTQCTPSYRLL PKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMRKNQYEESLFRCEDDRYEMDM LLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHLSAMNLRCIERLYGDNGLDVMDLLK KNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLS TKCLVAEVKDISEKKHQEDLLQAIAVRVMPLFTPDLEFNYCDTQIHEDLYLLIKYYCEEI CATEQSDKVMKLWITFLEPIFGILSRSQDNLALEDVSKLKNNRELQDACLAVKETASGSN RKHPISPKRLSKDNTKMQGSSSREDVSANIKVKTAQPDKLQDDAAMTNEVIQSSKFVSPK NDQIMEDEGNHMVNAASVEKHELEEGELSPTASREQSNFEVNGQNAFKPLQKVTDNVRSN KDKQSCDKKGAKNKTRAEDDKQENCHKLSENNKTASEMLVSGTKVSCHEENNRVMNCNGR GSVAGEMANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYY VLFRLHQMLYERIQTAKKHSEKKWKAADNTTPDSYPRFMDALYNLLDGSIDNTKFEDECR AIFGAQSYVLFTLDKLVQKFVKHLHSVASDETDTKLLQLHAYENYRKPGKFFDLVYHENA CALLHEANIYRIRYSSEGTRLSIQLMNSGNNQLEVMGVAMEPAFADYLQNKCLKSVNDEE NHGLFLNRNKKKFTSLDESRGMPVAMERLNIINEMECRMACSSSKVKYVANTSDLLYRSK QGKPNSRVSEILKQRRISRFHIMLNCRLCALPL

Transcript Sequence

Transcript ID	AT1G10450.3
Transcript Infomation	\| paired amphipathic helix Sin3-like protein \| Chr1:3432160-3437979 FORWARD LENGTH=3522 \| 201606
Sequence	ATGAGAGATCTATTACTTGGGACAACGATTCCGAGCTATTTCTCTTGGCTTGGACTATTT CCACGGTTCTTAGTTTGGTTTGGCTTCTTAAAAGCCTCTTTTTTTTGTTCTTCCAGAAAT CAGTCTGCGGGAGAAAGTGGAAGAAGACTGAAGATGAAGAGAGCTAGAGAAGATGTTCAC ACTGACACTCAAAAGCGAAAGCCTGAAGTTTCGTCTCGAGGAGAAACAAACAAGCTACCT CGAACCATCGATGCCCTAACGTATCTCAAAGCTGTGAAGGATATTTTTCACGACAATAAA GAGAAATATGAGTCATTCCTGGAGCTCATGAAGGAGTTCAAAGCTCAGACAATCGACACT AATGGTGTCATAGAAAGGATTAAAGTGTTGTTCAAGGGTTACAGGGACCTACTTTTGGGT TTTAATACTTTCTTGCCCAAAGGGTATAAAATAACCCTTCTGCCAGAGGAAGAGAAGCCT AAGATCCGGGTGGATTTCAAAGACGCTATCGGTTTCGTCACCAAGATTAAGACGAGGTTT GGAGATGATGAACATGCGTATAAACGGTTTCTAGACATCTTGAACTTGTATAGAAAGGAG AAAAAGTCCATCTCTGAGGTCTACGAAGAGGTTACTATGTTATTCAAGGGTCATGAAGAT CTGCTTATGGAGTTCGTTAATTTCTTACCTAATTGTCCAGAATCAGCTCCCTCGACAAAG AATGCAGTACCGCGTCACAAGGGCACTGCAACTACTGCCATGCATTCTGATAAGAAAAGA AAACAACGATGTAAGCTTGAGGATTATTCTGGACACTCTGATCAACGAGAAGATGGTGAT GAGAATCTTGTCACTTGCTCCGCTGACTCCCCTGTCGGGGAAGGTCAGCCAGGATACTTT CGAGATTATGAAAATAGAGAAGATACTGAAACAGATACAGCAGATAGAACTGAAAAAAGT GCAGCATCTGGCAGTCAAGATATCGGAAATCACAAATCGACTACCAAGTATGTGGGAACA CCTATAAATGAGCTTGATCTTTCTGAATGCACTCAGTGTACCCCAAGTTATCGACTCCTG CCAAAGGATTATGCAGTTGAGATCCCAAGCTACAGAAATACACTTGGTAAAAAGACACTC AATGACCACTTGGTATCTGTCACTTCAGGGAGTGAAGATTACTCATTCAGTCATATGCGC AAAAACCAGTATGAAGAAAGCTTGTTTCGGTGTGAGGATGACAGGTATGAAATGGACATG TTACTAGGATCTGTAAGTTCAGCCATTAAACAGGTGGAAATCCTTCTCGAAAAGATGAAC AACAACACTATCTCAGTAGACTCTACTATATGTATCGAAAAACACTTATCAGCTATGAAC TTAAGATGCATTGAGCGGTTATACGGTGATAATGGGCTTGATGTCATGGATCTTTTGAAG AAGAATATGCATAGCGCTTTACCGGTGATACTAACGCGCTTGAAGCAGAAGCAAGAAGAA TGGGCAAGGTGCCATTCTGATTTCCAGAAAGTTTGGGCAGAAGTATATGCTAAGAATCAC CATAAGTCACTAGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAACTTGAGC ACAAAATGTTTAGTGGCAGAAGTGAAAGATATCAGTGAGAAAAAGCATCAAGAAGATCTG CTTCAAGCTATTGCTGTTAGAGTTATGCCCTTATTTACTCCTGATTTGGAGTTCAATTAT TGTGATACACAAATTCACGAGGATCTATATCTGCTAATCAAGTATTACTGTGAAGAAATA TGTGCCACTGAACAATCAGATAAGGTAATGAAGCTGTGGATAACCTTTTTGGAGCCCATC TTTGGCATTCTTTCGAGGTCTCAAGATAACCTTGCTCTGGAAGATGTGTCAAAGTTGAAA AACAACCGAGAATTGCAAGATGCATGTTTGGCAGTGAAGGAGACAGCTTCTGGGTCAAAC CGTAAACATCCAATATCCCCGAAACGACTGAGCAAAGATAATACAAAAATGCAAGGAAGT TCTTCTCGGGAAGATGTCTCAGCCAATATAAAAGTGAAAACTGCCCAGCCCGATAAGCTT CAGGATGATGCAGCTATGACTAATGAGGTTATCCAGTCTTCCAAATTTGTGTCACCCAAA AATGACCAGATAATGGAGGATGAAGGGAATCATATGGTTAACGCAGCATCGGTGGAAAAG CATGAGCTAGAAGAGGGTGAATTATCTCCCACCGCCAGTCGTGAGCAAAGCAACTTTGAG GTTAATGGACAGAATGCCTTCAAGCCTTTACAAAAGGTGACGGACAATGTAAGAAGCAAT AAAGACAAGCAAAGTTGTGATAAAAAGGGAGCAAAGAACAAAACTCGCGCTGAAGATGAC AAACAAGAAAATTGTCACAAGTTATCAGAGAATAATAAGACTGCCTCTGAAATGCTTGTT TCAGGAACCAAGGTTAGTTGTCATGAAGAGAACAACAGAGTTATGAACTGTAATGGGCGT GGTAGTGTGGCTGGAGAGATGGCTAATGGAAATCAAGGTGAAGATGGATCCTTCGCATTT TCAGAACGGTTTCTGCAAACTGTAAAACCTGTTGCCAAGCATCTGTCTTGGCCATTGCAA GCTAGTGAAACTTGCTCCCAGAATGATTCTCAAGTTTTTTACGGGAATGATTCCTATTAT GTGCTATTTAGGCTTCATCAAATGTTGTACGAGAGAATACAAACAGCAAAGAAACATTCA GAAAAGAAATGGAAGGCTGCAGATAACACGACTCCTGATTCTTATCCCAGGTTCATGGAT GCACTCTATAATTTACTTGACGGTTCTATTGACAATACAAAGTTTGAAGATGAGTGCCGA GCTATTTTTGGAGCACAGTCATATGTTCTTTTCACATTGGACAAGCTAGTTCAGAAGTTT GTTAAGCATCTCCATTCGGTTGCATCTGATGAAACAGACACCAAGCTTCTGCAACTACAT GCGTATGAGAACTACAGAAAACCTGGAAAATTCTTTGATCTAGTGTATCATGAGAATGCA TGTGCCCTCCTCCATGAGGCAAACATATACCGGATCAGATATTCATCAGAAGGAACACGT CTCTCGATTCAGCTTATGAACAGTGGGAACAATCAGCTTGAAGTAATGGGTGTAGCGATG GAGCCGGCATTTGCAGATTATCTACAAAATAAATGTCTGAAATCCGTCAATGATGAAGAG AATCACGGACTGTTTCTGAACAGGAACAAAAAGAAATTCACCAGCTTAGATGAATCTAGG GGGATGCCTGTTGCGATGGAAAGATTGAATATTATCAACGAGATGGAATGTAGGATGGCT TGCAGTTCTTCAAAGGTGAAGTACGTAGCAAATACATCAGATCTTTTGTACAGAAGCAAA CAGGGGAAACCGAATTCAAGAGTTAGTGAAATCTTGAAACAGAGAAGAATATCGCGGTTT CACATAATGCTGAATTGCAGACTTTGTGCCTTGCCTCTATAA