Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G10170.4
CDS Infomation	\| NF-X-like 1 \| Chr1:3333789-3337491 REVERSE LENGTH=3630 \| 201606
Sequence	ATGAGCTTTCAAGTCAGGCGAGATAGGAGCGATGATAGGTCTCATCGATTCAATCATCAG CAAACGTGGATTCCTAGAAACTCATCTACCTCGAGCGTGGTGGTAAATGAGCCTTTGCTT CCTCCTAATACAGATAGAAATTCTGAAACCCTTGATGCTGGTTCTGCATCCCGTCCTGTT TATCTGCAAAGGCAGCATAACGCTTCTGGTCCTCCGTCCTATAACCACCACCAAAGGAGT AGTAACATTGGTCCACCTCCACCTAATCAACATAGAAGATATAATGCGCCTGATAACCAG CATCAAAGGAGTGATAACATTGGTCCACCTCAACCTAATCAACATAGAAGATATAATGCG CCTGATAACCAGCATCAAAGGAGTGATAACAGTGGTCCACCTCAACCTTATCGACATAGA AGAAATAATGCTCCTGAGAACCAGCACCAAAGGAGTGATAACATTGGTCCACCTCCACCT AATCGACAAAGAAGGAATAATGCTTCTGGAACTCTGCCAGATAATCGCCAAAGAGTTGCA TCTAGGACGCGGCCTGTGAATCAGGGGAAAAGGGTAGCGAAGGAGGAGAATGTTGTGTTG ACAGACCCAAACTTGCCTCAACTTGTTCAAGAGTTACAGGAGAAGCTTGTCAAGAGTTCT ATTGAGTGTATGATTTGTTATGACAAGGTTGGGAGGTCTGCCAATATCTGGTCATGCTCC AGCTGTTATTCCATCTTCCATATCAACTGTATCAAGAGGTGGGCTCGAGCACCAACTTCA GTTGATTTGCTAGCTGAGAAAAACCAAGGTGATAACTGGAGATGTCCAGGTTGCCAATCT GTACAGTTGACATCATCTAAAGAGATTTCCTATCGGTGCTTTTGTGGAAAGAGAAGAGAT CCACCGTCTGACCCATATCTCACTCCACACTCATGCGGGGAACCATGTGGGAAACCGCTG GAGAAAGAGTTTGCACCTGCTGAGACGACTGAAGAGGATCTTTGTCCTCATGTATGTGTT TTGCAGTGTCATCCTGGTCCATGTCCTCCCTGTAAAGCCTTTGCTCCACCTCGTAGCTGT CCTTGTGGGAAAAAGATGGTTACTACTAGATGCTCCGAGCGGAGATCTGATCTTGTTTGT GGGCAGCGTTGCGATAAGCTTCTTAGTTGCGGGCGTCATCAATGTGAAAGGACATGTCAT GTTGGCCCTTGTGATCCTTGTCAGGTACTGGTAAATGCCACATGTTTCTGCAAGAAAAAA GTGGAGACTGTCATTTGCGGTGATATGAATGTGAAGGGGGAATTGAAAGCAGAAGATGGT GTCTATTCATGCAGTTTTAACTGTGGGAAGCCTCTTGGATGTGGTAATCATTTCTGTTCC GAGGTATGCCATCCTGGACCTTGCGGGGACTGTGACTTACTGCCCAGTAGAGTTAAGACA TGCTATTGTGGGAATACGCGTTTAGAAGAACAGATCAGGCAGAGTTGCTTGGACCCAATT CCTTCTTGTTCAAATGTATGTAGGAAGCTTCTTCCTTGTAGGTTACATACTTGCAATGAG ATGTGCCATGCAGGTGATTGCCCGCCTTGTTTAGTCCAAGTTAACCAGAAATGCCGGTGT GGGTCAACATCCAGGGCTGTGGAATGCTACATAACAACTTCCTCAGAGGCAGAGAAGTTT GTGTGCGCTAAGCCATGTGGACGTAAGAAGAACTGTGGGAGACATAGATGTAGCGAGCGT TGCTGCCCTCTCTTGAACGGGAAGAAGAATGATTTATCTGGCGATTGGGACCCACATGTC TGCCAAATACCTTGTCAGAAGAAGCTAAGGTGTGGGCAGCATTCCTGTGAATCTTTATGT CACAGTGGACATTGCCCTCCTTGTCTCGAGATGATCTTCACTGATCTTACATGTGCTTGT GGAAGAACTTCGATTCCTCCTCCACTATCATGTGGGACACCTGTTCCTAGCTGTCAGCTT CCATGCCCGATTCCTCAGCCTTGTGGCCATTCTGATACGCATGGATGCCATTTTGGAGAT TGTCCTCCTTGTTCTACCCCTGTGGAAAAGAAGTGCGTTGGTGGTCATGTGGTTCTCAGA AACATACCCTGTGGGTTGAAAGACATTAGATGTACCAAGATTTGTGGAAAGACGAGGCGT TGTGGCATGCATGCTTGTGCCAGAACTTGTCACCCGGAGCCTTGTGACAGCTTCAATGAA TCTGAAGCAGGTATGCGTGTTACGTGTAGACAGAAATGTGGTGCTCCTAGAACAGATTGC AGACACACTTGTGCAGCACTCTGCCATCCTTCTGCGCCTTGCCCTGACCTAAGATGTGAA TTTTCAGTCACAATTACTTGTTCATGTGGTCGTATAACCGCTACGGTCCCTTGTGATGCT GGGGGAAGAAGTGCCAACGGTTCTAATGTTTACTGTGCGGCCTATGATGAAGCCTCTGTT TTACAGAAGCTTCCAGCTCCACTTCAGCCTGTTGAATCGAGCGGAAACCGTATCCCCCTC GGGCAGAGAAAGCTTTCGTGTGATGATGAGTGTGCGAAGCTGGAGCGTAAGCGGGTTCTT CAAGATGCATTTGATATAACTCCCCCAAATCTGGAGGCATTACATTTCAGCGAGAATTCT GCTATGACAGAGATTATTTCAGACCTTTATAGGCGTGATCCAAAGTGGGTACTGGCTGTT GAAGAGCGCTGCAAGTTCTTGGTACTTGGGAAAGCAAGAGGAAGCACAAGTGCCCTTAAG GTCCATATCTTCTGCCCGATGCAGAAGGATAAACGAGACACGGTTCGACTTATAGCTGAG AGGTGGAAACTTGGTGTTAGCAACGCAGGGTGGGAGCCAAAACGGTTTACAGTGGTTCAC GTAACAGCAAAATCGAAACCGCCAACAAGGATCATTGGAGCTAGGGGTGGTGCTATCTCG ATAGGAGGGCCACACCCACCGTTCTATGATTCGCTGGTGGATATGGATCCTGGACTTGTG GTTTCTTTTCTGGATCTTCCGAGAGAGGCGAATATCAGCGCCTTGGTACTGAGATTTGGG GGTGAATGTGAGCTTGTTTGGCTGAATGACAAGAATGCTTTAGCGGTGTTCCACGACCAT GCCCGAGCTGCCACTGCCATGAGGAGGCTTGAGCACGGTTCAGTATATCATGGAGCTGTG GTTGTCCAGAGCGGCGGGCAATCTCCATCACTTAATAATGTATGGGGAAAATTACCTGGC AGCTCGGCGTGGGATGTTGACAAAGGAAATCCATGGAGGAGAGCTGTGATTCAGGAGAGT GATGACTCCTGGGGAGCTGAAGATTCCCCCATTGGAGGATCATCTACAGATGCTCAAGCC TCTGCGCTGAGATCAGCAAAGAGCAACTCTCCAATTGTTACCTCGGTTAACCGTTGGAGT GTTTTAGAGCCCAAGAAGGCCAGCACATCCACTTTGGAGCCAATTGCTCAGATAGAAGAG AGCAGTAGTTCAAAAACTACCGGTAAACAACCGGTGGAAGGCTCCGGTGAAGAAGTGGTG GATGACTGGGAGAAGATTGTTCAGACGTATATAATGGAGACTGTATGCGTGTGCGTATGC TGTGATGAGTCCATTTCAAAGCTTAGGTGA

Peptide Sequence

PEP ID	AT1G10170.4
PEP Infomation	\| NF-X-like 1 \| Chr1:3333789-3337491 REVERSE LENGTH=1209 \| 201606
Sequence	MSFQVRRDRSDDRSHRFNHQQTWIPRNSSTSSVVVNEPLLPPNTDRNSETLDAGSASRPV YLQRQHNASGPPSYNHHQRSSNIGPPPPNQHRRYNAPDNQHQRSDNIGPPQPNQHRRYNA PDNQHQRSDNSGPPQPYRHRRNNAPENQHQRSDNIGPPPPNRQRRNNASGTLPDNRQRVA SRTRPVNQGKRVAKEENVVLTDPNLPQLVQELQEKLVKSSIECMICYDKVGRSANIWSCS SCYSIFHINCIKRWARAPTSVDLLAEKNQGDNWRCPGCQSVQLTSSKEISYRCFCGKRRD PPSDPYLTPHSCGEPCGKPLEKEFAPAETTEEDLCPHVCVLQCHPGPCPPCKAFAPPRSC PCGKKMVTTRCSERRSDLVCGQRCDKLLSCGRHQCERTCHVGPCDPCQVLVNATCFCKKK VETVICGDMNVKGELKAEDGVYSCSFNCGKPLGCGNHFCSEVCHPGPCGDCDLLPSRVKT CYCGNTRLEEQIRQSCLDPIPSCSNVCRKLLPCRLHTCNEMCHAGDCPPCLVQVNQKCRC GSTSRAVECYITTSSEAEKFVCAKPCGRKKNCGRHRCSERCCPLLNGKKNDLSGDWDPHV CQIPCQKKLRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGRTSIPPPLSCGTPVPSCQL PCPIPQPCGHSDTHGCHFGDCPPCSTPVEKKCVGGHVVLRNIPCGLKDIRCTKICGKTRR CGMHACARTCHPEPCDSFNESEAGMRVTCRQKCGAPRTDCRHTCAALCHPSAPCPDLRCE FSVTITCSCGRITATVPCDAGGRSANGSNVYCAAYDEASVLQKLPAPLQPVESSGNRIPL GQRKLSCDDECAKLERKRVLQDAFDITPPNLEALHFSENSAMTEIISDLYRRDPKWVLAV EERCKFLVLGKARGSTSALKVHIFCPMQKDKRDTVRLIAERWKLGVSNAGWEPKRFTVVH VTAKSKPPTRIIGARGGAISIGGPHPPFYDSLVDMDPGLVVSFLDLPREANISALVLRFG GECELVWLNDKNALAVFHDHARAATAMRRLEHGSVYHGAVVVQSGGQSPSLNNVWGKLPG SSAWDVDKGNPWRRAVIQESDDSWGAEDSPIGGSSTDAQASALRSAKSNSPIVTSVNRWS VLEPKKASTSTLEPIAQIEESSSSKTTGKQPVEGSGEEVVDDWEKIVQTYIMETVCVCVC CDESISKLR

Transcript Sequence

Transcript ID	AT1G10170.4
Transcript Infomation	\| NF-X-like 1 \| Chr1:3333595-3338084 REVERSE LENGTH=4031 \| 201606
Sequence	TTCCTCATCGCTCCATTTTCTCCTACAGTCTCTTTCTCTCTCTCCCTGAGAAAACAAGGG AGACTAATCGGAATCTCCTGCGTATTTGATTCTTCCGGCGATTGTTTCCTTCTTTATACG CTTTCGTATATTCTTGTCAGAAGCACCATTGCTCCAACAGTGACGGGTACAGGATCTAGT TCTGTGTTTGTGGAGTCAAGGCAGAATATGAGCTTTCAAGTCAGGCGAGATAGGAGCGAT GATAGGTCTCATCGATTCAATCATCAGCAAACGTGGATTCCTAGAAACTCATCTACCTCG AGCGTGGTGGTAAATGAGCCTTTGCTTCCTCCTAATACAGATAGAAATTCTGAAACCCTT GATGCTGGTTCTGCATCCCGTCCTGTTTATCTGCAAAGGCAGCATAACGCTTCTGGTCCT CCGTCCTATAACCACCACCAAAGGAGTAGTAACATTGGTCCACCTCCACCTAATCAACAT AGAAGATATAATGCGCCTGATAACCAGCATCAAAGGAGTGATAACATTGGTCCACCTCAA CCTAATCAACATAGAAGATATAATGCGCCTGATAACCAGCATCAAAGGAGTGATAACAGT GGTCCACCTCAACCTTATCGACATAGAAGAAATAATGCTCCTGAGAACCAGCACCAAAGG AGTGATAACATTGGTCCACCTCCACCTAATCGACAAAGAAGGAATAATGCTTCTGGAACT CTGCCAGATAATCGCCAAAGAGTTGCATCTAGGACGCGGCCTGTGAATCAGGGGAAAAGG GTAGCGAAGGAGGAGAATGTTGTGTTGACAGACCCAAACTTGCCTCAACTTGTTCAAGAG TTACAGGAGAAGCTTGTCAAGAGTTCTATTGAGTGTATGATTTGTTATGACAAGGTTGGG AGGTCTGCCAATATCTGGTCATGCTCCAGCTGTTATTCCATCTTCCATATCAACTGTATC AAGAGGTGGGCTCGAGCACCAACTTCAGTTGATTTGCTAGCTGAGAAAAACCAAGGTGAT AACTGGAGATGTCCAGGTTGCCAATCTGTACAGTTGACATCATCTAAAGAGATTTCCTAT CGGTGCTTTTGTGGAAAGAGAAGAGATCCACCGTCTGACCCATATCTCACTCCACACTCA TGCGGGGAACCATGTGGGAAACCGCTGGAGAAAGAGTTTGCACCTGCTGAGACGACTGAA GAGGATCTTTGTCCTCATGTATGTGTTTTGCAGTGTCATCCTGGTCCATGTCCTCCCTGT AAAGCCTTTGCTCCACCTCGTAGCTGTCCTTGTGGGAAAAAGATGGTTACTACTAGATGC TCCGAGCGGAGATCTGATCTTGTTTGTGGGCAGCGTTGCGATAAGCTTCTTAGTTGCGGG CGTCATCAATGTGAAAGGACATGTCATGTTGGCCCTTGTGATCCTTGTCAGGTACTGGTA AATGCCACATGTTTCTGCAAGAAAAAAGTGGAGACTGTCATTTGCGGTGATATGAATGTG AAGGGGGAATTGAAAGCAGAAGATGGTGTCTATTCATGCAGTTTTAACTGTGGGAAGCCT CTTGGATGTGGTAATCATTTCTGTTCCGAGGTATGCCATCCTGGACCTTGCGGGGACTGT GACTTACTGCCCAGTAGAGTTAAGACATGCTATTGTGGGAATACGCGTTTAGAAGAACAG ATCAGGCAGAGTTGCTTGGACCCAATTCCTTCTTGTTCAAATGTATGTAGGAAGCTTCTT CCTTGTAGGTTACATACTTGCAATGAGATGTGCCATGCAGGTGATTGCCCGCCTTGTTTA GTCCAAGTTAACCAGAAATGCCGGTGTGGGTCAACATCCAGGGCTGTGGAATGCTACATA ACAACTTCCTCAGAGGCAGAGAAGTTTGTGTGCGCTAAGCCATGTGGACGTAAGAAGAAC TGTGGGAGACATAGATGTAGCGAGCGTTGCTGCCCTCTCTTGAACGGGAAGAAGAATGAT TTATCTGGCGATTGGGACCCACATGTCTGCCAAATACCTTGTCAGAAGAAGCTAAGGTGT GGGCAGCATTCCTGTGAATCTTTATGTCACAGTGGACATTGCCCTCCTTGTCTCGAGATG ATCTTCACTGATCTTACATGTGCTTGTGGAAGAACTTCGATTCCTCCTCCACTATCATGT GGGACACCTGTTCCTAGCTGTCAGCTTCCATGCCCGATTCCTCAGCCTTGTGGCCATTCT GATACGCATGGATGCCATTTTGGAGATTGTCCTCCTTGTTCTACCCCTGTGGAAAAGAAG TGCGTTGGTGGTCATGTGGTTCTCAGAAACATACCCTGTGGGTTGAAAGACATTAGATGT ACCAAGATTTGTGGAAAGACGAGGCGTTGTGGCATGCATGCTTGTGCCAGAACTTGTCAC CCGGAGCCTTGTGACAGCTTCAATGAATCTGAAGCAGGTATGCGTGTTACGTGTAGACAG AAATGTGGTGCTCCTAGAACAGATTGCAGACACACTTGTGCAGCACTCTGCCATCCTTCT GCGCCTTGCCCTGACCTAAGATGTGAATTTTCAGTCACAATTACTTGTTCATGTGGTCGT ATAACCGCTACGGTCCCTTGTGATGCTGGGGGAAGAAGTGCCAACGGTTCTAATGTTTAC TGTGCGGCCTATGATGAAGCCTCTGTTTTACAGAAGCTTCCAGCTCCACTTCAGCCTGTT GAATCGAGCGGAAACCGTATCCCCCTCGGGCAGAGAAAGCTTTCGTGTGATGATGAGTGT GCGAAGCTGGAGCGTAAGCGGGTTCTTCAAGATGCATTTGATATAACTCCCCCAAATCTG GAGGCATTACATTTCAGCGAGAATTCTGCTATGACAGAGATTATTTCAGACCTTTATAGG CGTGATCCAAAGTGGGTACTGGCTGTTGAAGAGCGCTGCAAGTTCTTGGTACTTGGGAAA GCAAGAGGAAGCACAAGTGCCCTTAAGGTCCATATCTTCTGCCCGATGCAGAAGGATAAA CGAGACACGGTTCGACTTATAGCTGAGAGGTGGAAACTTGGTGTTAGCAACGCAGGGTGG GAGCCAAAACGGTTTACAGTGGTTCACGTAACAGCAAAATCGAAACCGCCAACAAGGATC ATTGGAGCTAGGGGTGGTGCTATCTCGATAGGAGGGCCACACCCACCGTTCTATGATTCG CTGGTGGATATGGATCCTGGACTTGTGGTTTCTTTTCTGGATCTTCCGAGAGAGGCGAAT ATCAGCGCCTTGGTACTGAGATTTGGGGGTGAATGTGAGCTTGTTTGGCTGAATGACAAG AATGCTTTAGCGGTGTTCCACGACCATGCCCGAGCTGCCACTGCCATGAGGAGGCTTGAG CACGGTTCAGTATATCATGGAGCTGTGGTTGTCCAGAGCGGCGGGCAATCTCCATCACTT AATAATGTATGGGGAAAATTACCTGGCAGCTCGGCGTGGGATGTTGACAAAGGAAATCCA TGGAGGAGAGCTGTGATTCAGGAGAGTGATGACTCCTGGGGAGCTGAAGATTCCCCCATT GGAGGATCATCTACAGATGCTCAAGCCTCTGCGCTGAGATCAGCAAAGAGCAACTCTCCA ATTGTTACCTCGGTTAACCGTTGGAGTGTTTTAGAGCCCAAGAAGGCCAGCACATCCACT TTGGAGCCAATTGCTCAGATAGAAGAGAGCAGTAGTTCAAAAACTACCGGTAAACAACCG GTGGAAGGCTCCGGTGAAGAAGTGGTGGATGACTGGGAGAAGATTGTTCAGACGTATATA ATGGAGACTGTATGCGTGTGCGTATGCTGTGATGAGTCCATTTCAAAGCTTAGGTGATAG CCAACGACGTGCCGTTTTTGTTTTGGCATCTTTGGCGTGCGTTTGGTTTATTTATGTAGT AACTAAAAAAACATCCCATTGTTCAGTAACTTCAGTTATTGTGAAACGGCATGTTTGTAA CGCTTTTTTTTTTCTCTTTTATTCTTGACATAATGATGCAACACTAAGGTTGGTTATTCA TTCATTAGTAC