Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G09880.3
CDS Infomation	\| Rhamnogalacturonate lyase family protein \| Chr1:3208828-3213417 REVERSE LENGTH=2136 \| 201606
Sequence	ATGATTTCGAGAAAGCCCCAAGACAAATCCGCTGATTTCATCATGTTTCTCTTCTCTTCA CATGTGTTCAAGCTCGTGACGACAAAAGATTATCGGAGACACTTATTGAAACAAAGAGGA TGGGTTATTGCTTTGATCATGTTCATGTCTGTGTTTGAAATTGCATTCTGCCAAAACCAA ACTCCTGAGCCAGAATCAACACAAGTCTTGCAGCTACATTACCAAGATCGATATGTGGTA ATGGAGAATAGATTTTTACAATTAACTTTATCAAATCCTGAGGGTTTCGTCACCGGAATC CAGTATAATGGTATCGACAATGTGCTCGCCTACTACACCAACAAAGAATATGATAGAGGT TACTGGGACGTAGTGTGGAACTTCCCTGGGAAAAAGGCTAAAAAGACCAAAGGCACACTA GACCGGATTGAAGCAACAAAGATGGAAGTGATTACACAGAACGATGAGAAAATAGAGCTA TCGTTTACAAGGACATGGAATACATCTTCAACTACGGCTGTTCCAGTGAATATAGACAAG AGGTTTGTAATGCTGCAAAACTCGTCCGGATTCTACAGTTACGCCATCTTCGAACGGTTA CAAGGATGGCCCGCTGTTGAACTCGATAATATGCGATTAGTATTTAAGCTAAACAAGAAA AAATTTCATTACATGGCGATTTCAGATGACAGGCAAAGGTACATGCCTGTGCCAGATGAT CGGGTTCCGCCTCGTGGTCAGCCTCTTGCTTATCCCGAGGCAGTTCAACTTCTTGACCCT ATCGAGCCCGAGTTTAAAGGAGAGGTGGATGACAAGTATGAGTACTCAATGGAGAGTAAA GACATAAAAGTTCATGGATGGATAAGCACAAATGATTCAGTTGGGTTCTGGCAAATCACT CCAAGCAATGAGTTCCGTTCTGCTGGGCCTCTCAAGCAATTCCTAGGCTCCCATGTCGGT CCAACTAACCTTGCGGTATTTCACAGCACTCACTATGTTGGAGCAGACCTAATCATGAGT TTTAAAAACGGTGAAGCATGGAAGAAAGTATTTGGACCTGTCTTCATTTATCTCAACTCT TTTCCTAAAGGAGTTGATCCTCTCTTGCTCTGGCATGAAGCCAAGAACCAGACAAAGATT GAAGAAGAAAAGTGGCCTTATAACTTCACCGCTTCAGATGATTTTCCTGCATCTGACCAA AGAGGATCTGTTAGCGGTAGATTACTCGTAAGAGACAGATTCATAAGTAGTGAGGATATA CCTGCAAATGGTTCCTATGTGGGCTTGGCTGCACCAGGAGATGTTGGCTCATGGCAAAGA GAATGCAAAGGTTATCAATTCTGGTCTAAAGCAGACGAAAATGGATCTTTTTCTATCAAT AATGTGAGAAGTGGTCGTTATAATCTCTATGCATTTGCTCCGGGATTCATCGGTGATTAC CACAACGACACCGTTTTTGACATTTCTCCAGGCTCAAAGATTAGCTTAGGAGACTTAGTG TATGAGCCTCCTAGAGACGGTTCAACTCTATGGGAAATCGGTGTACCAGACCGAAGCGCT GCAGAGTTCTACATTCCTGACCCGAATCCAAGCTTTGTAAACAAACTATACTTAAACCAT TCTGATAAATATCGACAATACGGATTGTGGGAACGCTATTCAGAACTGTACCCCGATGAA GATATGGTCTACAATGTTGATATTGATGACTACTCTAAAAACTGGTTCTTCATGCAAGTT ACAAGGAAGCAAGCAAATGGAGGATATAAAGGTACAACATGGCAGATCAGATTTCAGTTC GACGATAAAATGAAAAACGTAACCGGAAACTTCAAACTGCGAATCGCTTTAGCCACATCA AACGTAGCAGAATTGCAGGTTCGGGTGAACGATCTTTCTGCAGACCCTCCATTGTTTAGG ACAGAGCAAATAGGAAGGGATAATACAATCGCAAGGCATGGTATTCATGGACTATATTGG TTATATAGTGTGAATGTTCCTGCTGCTTCTCTTCACGTGGGAAATAACACCATATATCTA ACTCAAGCGCTCGCCACAAGCCCTTTTCAAGGACTCATGTATGATTATATTCGTCTTGAA TATCCTGATTCCATCAATTATATTACTAGATCATAG

Peptide Sequence

PEP ID	AT1G09880.3
PEP Infomation	\| Rhamnogalacturonate lyase family protein \| Chr1:3208828-3213417 REVERSE LENGTH=711 \| 201606
Sequence	MISRKPQDKSADFIMFLFSSHVFKLVTTKDYRRHLLKQRGWVIALIMFMSVFEIAFCQNQ TPEPESTQVLQLHYQDRYVVMENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRG YWDVVWNFPGKKAKKTKGTLDRIEATKMEVITQNDEKIELSFTRTWNTSSTTAVPVNIDK RFVMLQNSSGFYSYAIFERLQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDD RVPPRGQPLAYPEAVQLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQIT PSNEFRSAGPLKQFLGSHVGPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNS FPKGVDPLLLWHEAKNQTKIEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDI PANGSYVGLAAPGDVGSWQRECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDY HNDTVFDISPGSKISLGDLVYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNH SDKYRQYGLWERYSELYPDEDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQF DDKMKNVTGNFKLRIALATSNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYW LYSVNVPAASLHVGNNTIYLTQALATSPFQGLMYDYIRLEYPDSINYITRS

Transcript Sequence

Transcript ID	AT1G09880.3
Transcript Infomation	\| Rhamnogalacturonate lyase family protein \| Chr1:3208789-3213468 REVERSE LENGTH=2226 \| 201606
Sequence	TTCACTGTTTGTATTTTAAAAATTTCCAGACTCCAGATCAACGACTATTGAATGATTTCG AGAAAGCCCCAAGACAAATCCGCTGATTTCATCATGTTTCTCTTCTCTTCACATGTGTTC AAGCTCGTGACGACAAAAGATTATCGGAGACACTTATTGAAACAAAGAGGATGGGTTATT GCTTTGATCATGTTCATGTCTGTGTTTGAAATTGCATTCTGCCAAAACCAAACTCCTGAG CCAGAATCAACACAAGTCTTGCAGCTACATTACCAAGATCGATATGTGGTAATGGAGAAT AGATTTTTACAATTAACTTTATCAAATCCTGAGGGTTTCGTCACCGGAATCCAGTATAAT GGTATCGACAATGTGCTCGCCTACTACACCAACAAAGAATATGATAGAGGTTACTGGGAC GTAGTGTGGAACTTCCCTGGGAAAAAGGCTAAAAAGACCAAAGGCACACTAGACCGGATT GAAGCAACAAAGATGGAAGTGATTACACAGAACGATGAGAAAATAGAGCTATCGTTTACA AGGACATGGAATACATCTTCAACTACGGCTGTTCCAGTGAATATAGACAAGAGGTTTGTA ATGCTGCAAAACTCGTCCGGATTCTACAGTTACGCCATCTTCGAACGGTTACAAGGATGG CCCGCTGTTGAACTCGATAATATGCGATTAGTATTTAAGCTAAACAAGAAAAAATTTCAT TACATGGCGATTTCAGATGACAGGCAAAGGTACATGCCTGTGCCAGATGATCGGGTTCCG CCTCGTGGTCAGCCTCTTGCTTATCCCGAGGCAGTTCAACTTCTTGACCCTATCGAGCCC GAGTTTAAAGGAGAGGTGGATGACAAGTATGAGTACTCAATGGAGAGTAAAGACATAAAA GTTCATGGATGGATAAGCACAAATGATTCAGTTGGGTTCTGGCAAATCACTCCAAGCAAT GAGTTCCGTTCTGCTGGGCCTCTCAAGCAATTCCTAGGCTCCCATGTCGGTCCAACTAAC CTTGCGGTATTTCACAGCACTCACTATGTTGGAGCAGACCTAATCATGAGTTTTAAAAAC GGTGAAGCATGGAAGAAAGTATTTGGACCTGTCTTCATTTATCTCAACTCTTTTCCTAAA GGAGTTGATCCTCTCTTGCTCTGGCATGAAGCCAAGAACCAGACAAAGATTGAAGAAGAA AAGTGGCCTTATAACTTCACCGCTTCAGATGATTTTCCTGCATCTGACCAAAGAGGATCT GTTAGCGGTAGATTACTCGTAAGAGACAGATTCATAAGTAGTGAGGATATACCTGCAAAT GGTTCCTATGTGGGCTTGGCTGCACCAGGAGATGTTGGCTCATGGCAAAGAGAATGCAAA GGTTATCAATTCTGGTCTAAAGCAGACGAAAATGGATCTTTTTCTATCAATAATGTGAGA AGTGGTCGTTATAATCTCTATGCATTTGCTCCGGGATTCATCGGTGATTACCACAACGAC ACCGTTTTTGACATTTCTCCAGGCTCAAAGATTAGCTTAGGAGACTTAGTGTATGAGCCT CCTAGAGACGGTTCAACTCTATGGGAAATCGGTGTACCAGACCGAAGCGCTGCAGAGTTC TACATTCCTGACCCGAATCCAAGCTTTGTAAACAAACTATACTTAAACCATTCTGATAAA TATCGACAATACGGATTGTGGGAACGCTATTCAGAACTGTACCCCGATGAAGATATGGTC TACAATGTTGATATTGATGACTACTCTAAAAACTGGTTCTTCATGCAAGTTACAAGGAAG CAAGCAAATGGAGGATATAAAGGTACAACATGGCAGATCAGATTTCAGTTCGACGATAAA ATGAAAAACGTAACCGGAAACTTCAAACTGCGAATCGCTTTAGCCACATCAAACGTAGCA GAATTGCAGGTTCGGGTGAACGATCTTTCTGCAGACCCTCCATTGTTTAGGACAGAGCAA ATAGGAAGGGATAATACAATCGCAAGGCATGGTATTCATGGACTATATTGGTTATATAGT GTGAATGTTCCTGCTGCTTCTCTTCACGTGGGAAATAACACCATATATCTAACTCAAGCG CTCGCCACAAGCCCTTTTCAAGGACTCATGTATGATTATATTCGTCTTGAATATCCTGAT TCCATCAATTATATTACTAGATCATAGAGTTGTATTCAGTTTTCCTTATAATGTTATTGA TTAATA