Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G09680.1
CDS Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:3134107-3135930 REVERSE LENGTH=1824 \| 201606
Sequence	ATGTTCAGAATCGAAATTCTAAGATGCACACTCTCTCAATCTCACCCACAGAGATTCTCT CGTGCATCATTCCTCTTGTCAACATGGTACTCTCAAGAATCTGTCTCCGCGGCAGACAAC GACGATGACCCAGTTCTTGTTAAACTCTCAGTTGCCATCAGAGATTCTTACAAGGATCCG CCGTTGGAGTTCTCTTCGTTCACTGACTGCCCCTCTATCAGAAAGGTCCTGCCTTCGCTC AGCGTTCATCATGTGGTTGATCTCATCAACCATAACCCTCTCTCCCTCCCACAACGTTCT ATCTTCGCTTTCTTCAAATTCATCTCATCTCAGCCTGGATTTCGTTTTACCGTTGAGACT TACTTCGTCTTGGCTCGTTTTCTTGCTGTTCACGAAATGTTCACCGAAGCACAGTCACTT ATCGAGCTCGTCGTCTCTCGTAAAGGCAAAAACTCAGCTTCTTCAGTTTTCATTTCTTTG GTAGAAATGAGAGTAACACCTATGTGTGGTTTCCTTGTTGATGCTTTGATGATCACGTAC ACGGATCTAGGTTTCATACCCGATGCTATTCAATGTTTTAGGCTATCTCGGAAGCATAGG TTTGATGTTCCAATTCGTGGCTGTGGCAATTTGCTTGATCGGATGATGAAGCTGAATCCA ACTGGGACTATTTGGGGATTCTATATGGAGATTTTGGATGCTGGGTTTCCCTTGAATGTG TACGTTTTCAATATTTTGATGAACAAATTCTGTAAAGAAGGCAATATATCTGATGCACAG AAGGTGTTCGACGAAATTACTAAAAGGAGTTTGCAGCCTACAGTGGTTAGTTTCAACACT TTGATAAATGGGTATTGTAAAGTAGGAAACTTGGATGAAGGGTTTAGGCTCAAACATCAG ATGGAGAAAAGCAGAACACGCCCAGATGTTTTCACCTATAGTGCCTTGATTAATGCATTG TGTAAAGAGAACAAAATGGATGGAGCACATGGCCTGTTTGATGAGATGTGTAAGAGAGGG TTGATCCCAAATGATGTTATTTTCACTACTTTGATTCATGGTCATAGTAGGAATGGAGAG ATTGACTTGATGAAAGAAAGTTATCAGAAGATGTTAAGTAAGGGTCTGCAGCCTGATATT GTTTTATATAATACTTTAGTAAATGGCTTTTGTAAGAACGGGGATTTGGTGGCTGCAAGG AATATAGTTGATGGAATGATTCGTAGAGGTCTGAGGCCCGACAAAATTACATACACAACT CTTATAGATGGATTTTGTAGAGGAGGAGATGTAGAAACAGCTTTGGAGATAAGGAAGGAG ATGGATCAGAATGGGATAGAACTCGATAGGGTGGGTTTCTCAGCCCTTGTTTGTGGAATG TGCAAAGAAGGAAGAGTCATTGATGCTGAAAGAGCTTTAAGAGAGATGCTGCGAGCTGGT ATTAAACCGGATGATGTAACCTATACAATGATGATGGATGCATTCTGTAAGAAAGGTGAT GCTCAGACCGGTTTCAAATTGCTCAAGGAAATGCAGAGCGATGGGCATGTTCCTAGTGTT GTGACGTATAATGTTCTGCTGAATGGTCTATGCAAATTGGGACAGATGAAGAATGCTGAT ATGTTGCTAGATGCCATGCTTAATATAGGGGTTGTTCCAGATGACATCACATACAACACT CTATTGGAAGGTCACCATAGACATGCAAATTCATCGAAGCGTTATATACAGAAACCGGAG ATAGGTATTGTAGCTGACTTGGCTTCTTACAAATCAATAGTCAATGAGCTAGATAGAGCT TCAAAAGATCACCGGAACAGATAA

Peptide Sequence

PEP ID	AT1G09680.1
PEP Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:3134107-3135930 REVERSE LENGTH=607 \| 201606
Sequence	MFRIEILRCTLSQSHPQRFSRASFLLSTWYSQESVSAADNDDDPVLVKLSVAIRDSYKDP PLEFSSFTDCPSIRKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVET YFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITY TDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNV YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD MLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRA SKDHRNR

Transcript Sequence

Transcript ID	AT1G09680.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR) superfamily protein \| Chr1:3133885-3135976 REVERSE LENGTH=2092 \| 201606
Sequence	CTGGAAATAGCCGGTTCCGGAGAAATTGAGAGTCAGAGTCTCAGAGATGTTCAGAATCGA AATTCTAAGATGCACACTCTCTCAATCTCACCCACAGAGATTCTCTCGTGCATCATTCCT CTTGTCAACATGGTACTCTCAAGAATCTGTCTCCGCGGCAGACAACGACGATGACCCAGT TCTTGTTAAACTCTCAGTTGCCATCAGAGATTCTTACAAGGATCCGCCGTTGGAGTTCTC TTCGTTCACTGACTGCCCCTCTATCAGAAAGGTCCTGCCTTCGCTCAGCGTTCATCATGT GGTTGATCTCATCAACCATAACCCTCTCTCCCTCCCACAACGTTCTATCTTCGCTTTCTT CAAATTCATCTCATCTCAGCCTGGATTTCGTTTTACCGTTGAGACTTACTTCGTCTTGGC TCGTTTTCTTGCTGTTCACGAAATGTTCACCGAAGCACAGTCACTTATCGAGCTCGTCGT CTCTCGTAAAGGCAAAAACTCAGCTTCTTCAGTTTTCATTTCTTTGGTAGAAATGAGAGT AACACCTATGTGTGGTTTCCTTGTTGATGCTTTGATGATCACGTACACGGATCTAGGTTT CATACCCGATGCTATTCAATGTTTTAGGCTATCTCGGAAGCATAGGTTTGATGTTCCAAT TCGTGGCTGTGGCAATTTGCTTGATCGGATGATGAAGCTGAATCCAACTGGGACTATTTG GGGATTCTATATGGAGATTTTGGATGCTGGGTTTCCCTTGAATGTGTACGTTTTCAATAT TTTGATGAACAAATTCTGTAAAGAAGGCAATATATCTGATGCACAGAAGGTGTTCGACGA AATTACTAAAAGGAGTTTGCAGCCTACAGTGGTTAGTTTCAACACTTTGATAAATGGGTA TTGTAAAGTAGGAAACTTGGATGAAGGGTTTAGGCTCAAACATCAGATGGAGAAAAGCAG AACACGCCCAGATGTTTTCACCTATAGTGCCTTGATTAATGCATTGTGTAAAGAGAACAA AATGGATGGAGCACATGGCCTGTTTGATGAGATGTGTAAGAGAGGGTTGATCCCAAATGA TGTTATTTTCACTACTTTGATTCATGGTCATAGTAGGAATGGAGAGATTGACTTGATGAA AGAAAGTTATCAGAAGATGTTAAGTAAGGGTCTGCAGCCTGATATTGTTTTATATAATAC TTTAGTAAATGGCTTTTGTAAGAACGGGGATTTGGTGGCTGCAAGGAATATAGTTGATGG AATGATTCGTAGAGGTCTGAGGCCCGACAAAATTACATACACAACTCTTATAGATGGATT TTGTAGAGGAGGAGATGTAGAAACAGCTTTGGAGATAAGGAAGGAGATGGATCAGAATGG GATAGAACTCGATAGGGTGGGTTTCTCAGCCCTTGTTTGTGGAATGTGCAAAGAAGGAAG AGTCATTGATGCTGAAAGAGCTTTAAGAGAGATGCTGCGAGCTGGTATTAAACCGGATGA TGTAACCTATACAATGATGATGGATGCATTCTGTAAGAAAGGTGATGCTCAGACCGGTTT CAAATTGCTCAAGGAAATGCAGAGCGATGGGCATGTTCCTAGTGTTGTGACGTATAATGT TCTGCTGAATGGTCTATGCAAATTGGGACAGATGAAGAATGCTGATATGTTGCTAGATGC CATGCTTAATATAGGGGTTGTTCCAGATGACATCACATACAACACTCTATTGGAAGGTCA CCATAGACATGCAAATTCATCGAAGCGTTATATACAGAAACCGGAGATAGGTATTGTAGC TGACTTGGCTTCTTACAAATCAATAGTCAATGAGCTAGATAGAGCTTCAAAAGATCACCG GAACAGATAACTTCCGACTGTTTGTGCTTGGATAGGACCCTAAAGTCATCGTGTAAGCTA GTGGTATGTTGAAATGAAATATATAGTAAACCAATAATTACAAAAATGGAAATGAGATAT AAACAAAACTATTGATAAAATGTTTCTTTAGCTGGATTTGGTCAGCTTGGCTACATTAAC GATTTTAGTCTGTTTATGTAAGAGGATCAATCTCCCATTTCCTCAACGGCGA