Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G08990.1
CDS Infomation	\| plant glycogenin-like starch initiation protein 5 \| Chr1:2888753-2890753 FORWARD LENGTH=1701 \| 201606
Sequence	ATGGGGGCCAAAAGCAAAAGTTCGAGTACGAGATTTTTTATGTTTTATCTTATACTAATA TCATTGTCGTTTTTGGGTTTGCTCTTAAACTTTAAACCTCTGTTTCTGCTCAACCCCATG ATCGCTTCTCCTTCGATAGTTGAGATTCGTTATTCTTTGCCGGAACCGGTTAAACGGACT CCGATATGGCTCCGACTCATTAGAAACTATCTTCCGGATGAGAAAAAGATCCGAGTGGGT CTTCTCAACATCGCAGAGAACGAGCGAGAGAGCTACGAGGCAAGCGGGACGTCGATCTTG GAGAATGTCCACGTGTCGCTCGATCCTCTTCCGAACAATCTGACATGGACGAGTTTATTC CCGGTTTGGATCGACGAGGATCACACGTGGCACATTCCTAGTTGTCCAGAAGTCCCTCTC CCTAAGATGGAAGGTTCCGAAGCTGACGTGGACGTCGTCGTTGTCAAAGTCCCGTGCGAT GGTTTCTCGGAGAAGAGAGGGTTAAGAGACGTTTTCAGGCTACAGGTGAATCTGGCGGCA GCGAATCTTGTGGTGGAGAGTGGTCGGAGGAATGTTGATCGGACTGTGTACGTTGTCTTC ATCGGATCTTGTGGGCCTATGCATGAGATCTTTAGGTGTGATGAGCGCGTGAAGCGCGTG GGGGACTATTGGGTCTATAGGCCTGATCTTACGAGGTTGAAGCAGAAGCTTCTCATGCCT CCTGGTTCATGTCAGATTGCTCCGCTAGGTCAAGGAGAAGCATGGATACAAGACAAGAAC AGAAATCTCACATCCGAAAAAACTACATTATCATCATTTACTGCCCAACGTGTCGCTTAC GTGACGTTACTACACTCATCGGAGGTATACGTATGCGGAGCAATAGCCTTAGCACAAAGC ATAAGGCAATCTGGATCAACCAAGGACATGATTCTCCTCCACGATGACTCTATAACCAAC ATCTCTCTCATTGGCCTAAGCCTTGCTGGCTGGAAACTACGGCGAGTGGAGAGAATTCGT AGTCCTTTTTCCAAGAAGCGTTCTTACAATGAGTGGAACTACAGTAAGTTACGTGTGTGG CAAGTGACAGATTACGACAAACTAGTGTTTATAGACGCAGACTTCATCATCGTCAAGAAT ATTGATTACCTTTTCTCCTATCCTCAACTTTCTGCCGCTGGCAATAACAAAGTCTTGTTC AACTCAGGAGTCATGGTTCTGGAGCCATCAGCTTGTTTATTCGAGGATTTGATGCTTAAA TCATTCAAGATCGGGTCATACAACGGGGGAGACCAAGGATTTCTGAACGAATATTTCGTG TGGTGGCATAGGTTATCAAAACGTTTAAATACGATGAAATACTTTGGTGATGAAAGCAGG CATGATAAAGCGCGCAATCTTCCAGAAAATTTAGAGGGCATACACTACTTGGGACTAAAA CCATGGCGATGTTACAGAGACTACGATTGTAACTGGGACTTGAAAACGCGACGTGTGTAT GCAAGCGAGTCGGTGCATGCGAGATGGTGGAAAGTGTACGACAAGATGCCTAAGAAGCTG AAAGGTTATTGTGGTTTGAATCTTAAGATGGAGAAGAACGTTGAGAAGTGGAGGAAAATG GCTAAGCTCAATGGTTTTCCTGAAAATCATTGGAAAATTAGAATAAAAGATCCTAGGAAG AAGAACCGTCTAAGTCAATGA

Peptide Sequence

PEP ID	AT1G08990.1
PEP Infomation	\| plant glycogenin-like starch initiation protein 5 \| Chr1:2888753-2890753 FORWARD LENGTH=566 \| 201606
Sequence	MGAKSKSSSTRFFMFYLILISLSFLGLLLNFKPLFLLNPMIASPSIVEIRYSLPEPVKRT PIWLRLIRNYLPDEKKIRVGLLNIAENERESYEASGTSILENVHVSLDPLPNNLTWTSLF PVWIDEDHTWHIPSCPEVPLPKMEGSEADVDVVVVKVPCDGFSEKRGLRDVFRLQVNLAA ANLVVESGRRNVDRTVYVVFIGSCGPMHEIFRCDERVKRVGDYWVYRPDLTRLKQKLLMP PGSCQIAPLGQGEAWIQDKNRNLTSEKTTLSSFTAQRVAYVTLLHSSEVYVCGAIALAQS IRQSGSTKDMILLHDDSITNISLIGLSLAGWKLRRVERIRSPFSKKRSYNEWNYSKLRVW QVTDYDKLVFIDADFIIVKNIDYLFSYPQLSAAGNNKVLFNSGVMVLEPSACLFEDLMLK SFKIGSYNGGDQGFLNEYFVWWHRLSKRLNTMKYFGDESRHDKARNLPENLEGIHYLGLK PWRCYRDYDCNWDLKTRRVYASESVHARWWKVYDKMPKKLKGYCGLNLKMEKNVEKWRKM AKLNGFPENHWKIRIKDPRKKNRLSQ

Transcript Sequence

Transcript ID	AT1G08990.1
Transcript Infomation	\| plant glycogenin-like starch initiation protein 5 \| Chr1:2888427-2890965 FORWARD LENGTH=2239 \| 201606
Sequence	AAACAAAACAATCACAAGCTTGGTCACCAATTTGATATATATCCGATACACCTGTACCTG TTGTTCAAACTAATTCTTAATTACAACACAAAACAGGCGCCTAACTTGCGCATGGAAGTT TATTACACAATTATTCGTAGACTCACCTAACGAATTGACTTCTACGCCAACGTGCGTCCA TGCATCTCAAGATCCTTCTTCAATCATACACCCATGAATTCGCACATATACGTTGATGTA TATGAGATTATGAAAAATTCACGTACACATTACATGTATCTTATAGACATCGCTAAGAGC ATAGAGAGAGAGAGAGTTGGGGGAAAATGGGGGCCAAAAGCAAAAGTTCGAGTACGAGAT TTTTTATGTTTTATCTTATACTAATATCATTGTCGTTTTTGGGTTTGCTCTTAAACTTTA AACCTCTGTTTCTGCTCAACCCCATGATCGCTTCTCCTTCGATAGTTGAGATTCGTTATT CTTTGCCGGAACCGGTTAAACGGACTCCGATATGGCTCCGACTCATTAGAAACTATCTTC CGGATGAGAAAAAGATCCGAGTGGGTCTTCTCAACATCGCAGAGAACGAGCGAGAGAGCT ACGAGGCAAGCGGGACGTCGATCTTGGAGAATGTCCACGTGTCGCTCGATCCTCTTCCGA ACAATCTGACATGGACGAGTTTATTCCCGGTTTGGATCGACGAGGATCACACGTGGCACA TTCCTAGTTGTCCAGAAGTCCCTCTCCCTAAGATGGAAGGTTCCGAAGCTGACGTGGACG TCGTCGTTGTCAAAGTCCCGTGCGATGGTTTCTCGGAGAAGAGAGGGTTAAGAGACGTTT TCAGGCTACAGGTGAATCTGGCGGCAGCGAATCTTGTGGTGGAGAGTGGTCGGAGGAATG TTGATCGGACTGTGTACGTTGTCTTCATCGGATCTTGTGGGCCTATGCATGAGATCTTTA GGTGTGATGAGCGCGTGAAGCGCGTGGGGGACTATTGGGTCTATAGGCCTGATCTTACGA GGTTGAAGCAGAAGCTTCTCATGCCTCCTGGTTCATGTCAGATTGCTCCGCTAGGTCAAG GAGAAGCATGGATACAAGACAAGAACAGAAATCTCACATCCGAAAAAACTACATTATCAT CATTTACTGCCCAACGTGTCGCTTACGTGACGTTACTACACTCATCGGAGGTATACGTAT GCGGAGCAATAGCCTTAGCACAAAGCATAAGGCAATCTGGATCAACCAAGGACATGATTC TCCTCCACGATGACTCTATAACCAACATCTCTCTCATTGGCCTAAGCCTTGCTGGCTGGA AACTACGGCGAGTGGAGAGAATTCGTAGTCCTTTTTCCAAGAAGCGTTCTTACAATGAGT GGAACTACAGTAAGTTACGTGTGTGGCAAGTGACAGATTACGACAAACTAGTGTTTATAG ACGCAGACTTCATCATCGTCAAGAATATTGATTACCTTTTCTCCTATCCTCAACTTTCTG CCGCTGGCAATAACAAAGTCTTGTTCAACTCAGGAGTCATGGTTCTGGAGCCATCAGCTT GTTTATTCGAGGATTTGATGCTTAAATCATTCAAGATCGGGTCATACAACGGGGGAGACC AAGGATTTCTGAACGAATATTTCGTGTGGTGGCATAGGTTATCAAAACGTTTAAATACGA TGAAATACTTTGGTGATGAAAGCAGGCATGATAAAGCGCGCAATCTTCCAGAAAATTTAG AGGGCATACACTACTTGGGACTAAAACCATGGCGATGTTACAGAGACTACGATTGTAACT GGGACTTGAAAACGCGACGTGTGTATGCAAGCGAGTCGGTGCATGCGAGATGGTGGAAAG TGTACGACAAGATGCCTAAGAAGCTGAAAGGTTATTGTGGTTTGAATCTTAAGATGGAGA AGAACGTTGAGAAGTGGAGGAAAATGGCTAAGCTCAATGGTTTTCCTGAAAATCATTGGA AAATTAGAATAAAAGATCCTAGGAAGAAGAACCGTCTAAGTCAATGAGAAGAGTCATCAA ACTCGCTTATTCAACAAGAGACTTAATTTTTTTTTTTTCTTTACGTAAAGATTTTGAAAG GGAATTTAATTTCTAACAGGTAATTGTGGATTATGAAGGAAAAACATTATACGTAGTTAT GATATATATTTCGTTCGAGTGAAAGTATTTTTAGTTTTTTACAAAGACTAATAACCATAC TTTTATTTGGAATAATAAT