Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G08540.1
CDS Infomation	\| RNApolymerase sigma subunit 2 \| Chr1:2703461-2706696 FORWARD LENGTH=1719 \| 201606
Sequence	ATGTCTTCTTGTCTTCTTCCTCAGTTCAAGTGCCCACCTGATTCTTTCTCTATTCACTTC CGAACCTCTTTCTGTGCCCCTAAACACAACAAGGGTTCAGTCTTCTTCCAACCGCAATGT GCAGTATCCACTTCACCGGCGTTATTAACTTCTATGCTTGATGTCGCAAAGCTTAGACTA CCCTCTTTCGATACTGATTCGGATTCCCTTATATCAGACAGGCAGTGGACTTATACAAGG CCCGATGGTCCTTCCACTGAGGCGAAGTATTTAGAAGCTTTAGCCTCTGAGACACTTCTC ACAAGCGATGAAGCAGTAGTTGTAGCAGCAGCAGCTGAAGCAGTCGCCCTTGCAAGAGCT GCTGTCAAAGTTGCCAAAGATGCAACATTATTTAAGAACAGTAACAACACGAACCTATTA ACTTCGTCAACGGCCGACAAACGCTCCAAGTGGGACCAGTTTACTGAGAAGGAACGTGCT GGCATATTGGGGCATCTAGCGGTTTCGGACAATGGAATTGTGAGTGATAAAATCACTGCA TCTGCCTCTAACAAAGAGTCTATTGGTGATTTAGAATCAGAAAAACAAGAAGAAGTTGAG CTTCTGGAGGAGCAACCTTCAGTGAGTTTAGCTGTGAGATCTACACGTCAAACTGAAAGG AAAGCTCGGAGGGCAAAAGGGTTAGAGAAAACTGCATCAGGTATTCCGTCTGTGAAGACT GGTTCGAGCCCTAAAAAGAAACGTCTTGTTGCGCAGGAAGTTGATCATAATGATCCTTTG CGTTATCTAAGAATGACAACAAGCAGTTCCAAGCTTCTCACTGTCAGAGAAGAACATGAG CTGTCGGCAGGAATACAGGACCTTCTGAAGTTAGAAAGACTTCAAACAGAGCTTACAGAG CGTAGTGGACGTCAGCCAACCTTTGCGCAGTGGGCTTCTGCTGCTGGAGTCGATCAGAAA TCATTAAGGCAACGTATACATCATGGCACACTATGCAAAGACAAAATGATCAAAAGCAAC ATTCGACTCGTTATTTCGATTGCAAAGAATTATCAAGGAGCTGGGATGAACCTCCAAGAT CTTGTCCAGGAAGGGTGCAGAGGGCTTGTGAGGGGAGCAGAGAAGTTTGATGCTACAAAG GGTTTTAAATTTTCGACTTACGCGCATTGGTGGATCAAGCAAGCTGTGCGGAAGTCTCTC TCTGATCAGTCCAGAATGATAAGATTGCCTTTTCACATGGTGGAAGCAACATATAGGGTG AAAGAGGCACGAAAGCAACTGTACAGTGAAACCGGTAAGCACCCAAAGAACGAAGAAATT GCAGAGGCAACAGGGCTGTCGATGAAGAGACTCATGGCGGTTCTACTCTCTCCTAAACCT CCGAGGTCGCTAGACCAGAAAATCGGAATGAATCAAAACCTCAAACCTTCGGAAGTGATA GCAGATCCAGAAGCAGTAACGTCAGAAGATATACTGATAAAGGAATTCATGAGGCAGGAC TTGGACAAAGTGTTGGACTCGTTGGGTACAAGGGAGAAACAAGTGATACGTTGGAGATTT GGGATGGAGGATGGGAGAATGAAGACGTTGCAAGAGATAGGAGAGATGATGGGAGTGAGC AGGGAGAGAGTAAGACAGATAGAGTCATCTGCATTCAGGAAACTAAAGAACAAGAAGAGA AACAACCATTTGCAGCAATACTTGGTTGCACAATCATAA

Peptide Sequence

PEP ID	AT1G08540.1
PEP Infomation	\| RNApolymerase sigma subunit 2 \| Chr1:2703461-2706696 FORWARD LENGTH=572 \| 201606
Sequence	MSSCLLPQFKCPPDSFSIHFRTSFCAPKHNKGSVFFQPQCAVSTSPALLTSMLDVAKLRL PSFDTDSDSLISDRQWTYTRPDGPSTEAKYLEALASETLLTSDEAVVVAAAAEAVALARA AVKVAKDATLFKNSNNTNLLTSSTADKRSKWDQFTEKERAGILGHLAVSDNGIVSDKITA SASNKESIGDLESEKQEEVELLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPSVKT GSSPKKKRLVAQEVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTE RSGRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQD LVQEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRV KEARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEVI ADPEAVTSEDILIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVS RERVRQIESSAFRKLKNKKRNNHLQQYLVAQS

Transcript Sequence

Transcript ID	AT1G08540.1
Transcript Infomation	\| RNApolymerase sigma subunit 2 \| Chr1:2703295-2706860 FORWARD LENGTH=2049 \| 201606
Sequence	GAAAATTAGAAGTAATGAATCCTTTGATTGAGATAGAAGCTTTATCCTCTTCTTCGTCTT CATCATCCGCGCATCACCAGTTTTTTCTCTCTCTCTACAAATCTTCTTAACGGCCTTTCA TCAATGGTCAGCAGACTTAGCTTTCGAATATAGGCTAAGAACGAGCATGTCTTCTTGTCT TCTTCCTCAGTTCAAGTGCCCACCTGATTCTTTCTCTATTCACTTCCGAACCTCTTTCTG TGCCCCTAAACACAACAAGGGTTCAGTCTTCTTCCAACCGCAATGTGCAGTATCCACTTC ACCGGCGTTATTAACTTCTATGCTTGATGTCGCAAAGCTTAGACTACCCTCTTTCGATAC TGATTCGGATTCCCTTATATCAGACAGGCAGTGGACTTATACAAGGCCCGATGGTCCTTC CACTGAGGCGAAGTATTTAGAAGCTTTAGCCTCTGAGACACTTCTCACAAGCGATGAAGC AGTAGTTGTAGCAGCAGCAGCTGAAGCAGTCGCCCTTGCAAGAGCTGCTGTCAAAGTTGC CAAAGATGCAACATTATTTAAGAACAGTAACAACACGAACCTATTAACTTCGTCAACGGC CGACAAACGCTCCAAGTGGGACCAGTTTACTGAGAAGGAACGTGCTGGCATATTGGGGCA TCTAGCGGTTTCGGACAATGGAATTGTGAGTGATAAAATCACTGCATCTGCCTCTAACAA AGAGTCTATTGGTGATTTAGAATCAGAAAAACAAGAAGAAGTTGAGCTTCTGGAGGAGCA ACCTTCAGTGAGTTTAGCTGTGAGATCTACACGTCAAACTGAAAGGAAAGCTCGGAGGGC AAAAGGGTTAGAGAAAACTGCATCAGGTATTCCGTCTGTGAAGACTGGTTCGAGCCCTAA AAAGAAACGTCTTGTTGCGCAGGAAGTTGATCATAATGATCCTTTGCGTTATCTAAGAAT GACAACAAGCAGTTCCAAGCTTCTCACTGTCAGAGAAGAACATGAGCTGTCGGCAGGAAT ACAGGACCTTCTGAAGTTAGAAAGACTTCAAACAGAGCTTACAGAGCGTAGTGGACGTCA GCCAACCTTTGCGCAGTGGGCTTCTGCTGCTGGAGTCGATCAGAAATCATTAAGGCAACG TATACATCATGGCACACTATGCAAAGACAAAATGATCAAAAGCAACATTCGACTCGTTAT TTCGATTGCAAAGAATTATCAAGGAGCTGGGATGAACCTCCAAGATCTTGTCCAGGAAGG GTGCAGAGGGCTTGTGAGGGGAGCAGAGAAGTTTGATGCTACAAAGGGTTTTAAATTTTC GACTTACGCGCATTGGTGGATCAAGCAAGCTGTGCGGAAGTCTCTCTCTGATCAGTCCAG AATGATAAGATTGCCTTTTCACATGGTGGAAGCAACATATAGGGTGAAAGAGGCACGAAA GCAACTGTACAGTGAAACCGGTAAGCACCCAAAGAACGAAGAAATTGCAGAGGCAACAGG GCTGTCGATGAAGAGACTCATGGCGGTTCTACTCTCTCCTAAACCTCCGAGGTCGCTAGA CCAGAAAATCGGAATGAATCAAAACCTCAAACCTTCGGAAGTGATAGCAGATCCAGAAGC AGTAACGTCAGAAGATATACTGATAAAGGAATTCATGAGGCAGGACTTGGACAAAGTGTT GGACTCGTTGGGTACAAGGGAGAAACAAGTGATACGTTGGAGATTTGGGATGGAGGATGG GAGAATGAAGACGTTGCAAGAGATAGGAGAGATGATGGGAGTGAGCAGGGAGAGAGTAAG ACAGATAGAGTCATCTGCATTCAGGAAACTAAAGAACAAGAAGAGAAACAACCATTTGCA GCAATACTTGGTTGCACAATCATAATTCTTTTTCTCTTCAATATGGAATGTTTTGTGCAT AGAACCCACCCACCTGAGCATAACAAGCAGTAAATTATTACTTTTTAGCATTTACGATTC TTGTGACAACTACTAAATCGAAAAAATTATTTTAAAACTAAAAAGAAATTGTTGTCTGAA AAACATAAG