Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Arabidopsis thaliana ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G08470.1
CDS Infomation	\| strictosidine synthase-like 3 \| Chr1:2682262-2683977 REVERSE LENGTH=1173 \| 201606
Sequence	ATGGCCATGAGCATACTCGCGAAGATCTTTCTCGTCTTTGCCATCTATTGCGCTATCGAT CCCTTCAGTCACAGCTCCATTTCCAAGTTCCCGGATTTCAAAACTTACAAGATTGACATG CCTCCGTTATCGTCACTTCCAAAGGAGAGAGACCGCCAGAATCTGTTGCAGAATTCAGAG ATCAGGTTTCTTAACGAGGTTCAAGGTCCCGAGAGCATTGCTTTCGATCCGCAAGGTCGT GGTCCTTATACCGGAGTCGCCGACGGTCGAATTCTCTTTTGGAATGGCACTCGTTGGACA GATTTCGCATATACTTCGAACAATCGGTCAGAGCTATGTGATCCTAAGCCATCGCTTTTG GATTACTTAAAGGATGAAGATATCTGTGGTCGGCCTTTAGGTCTTCGATTCGACAAGAAA AATGGGGATTTGTACATTGCAGATGCGTATTTGGGGATAATGAAAGTTGGTCCGGAAGGA GGTTTAGCAACTTCTGTTACAAACGAGGCTGATGGTGTGCCTTTGAGATTTACCAATGAT CTTGACATTGATGATGAAGGCAATGTTTACTTTACTGATAGCAGCTCTTTCTTCCAACGA AGGAAATTTATGCTTTTGATTGTCTCGGGGGAAGACAGTGGGAGGGTGTTGAAATACAAT CCAAAAACAAAGGAGACTACCACTCTCGTGAGAAATCTCCAGTTTCCTAACGGATTATCC CTCGGCAAAGACGGCTCCTTTTTCATCTTTTGTGAAGGATCTATTGGAAGATTACGGAAA TACTGGTTGAAAGGGGAGAAAGCTGGAACGTCAGAAGTGGTAGCTCTATTACATGGGTTC CCAGACAACATCCGCACAAACAAAGATGGAGATTTCTGGGTGGCGGTGCACTGCCACAGA AACATATTCACACACTTGATGGCGCATTACCCGAGGGTGAGGAAGTTCTTTCTGAAGCTG CCGATATCAGTGAAGTTTCAGTACTTGCTGCAGGTAGGTGGTTGGCCTCATGCTGTAGCT GTGAAGTACAGTGAAGAAGGGAAAGTGCTAAAGGTGTTGGAAGATAGTAAAGGGAAAGTG GTGAAGGCAGTGAGTGAAGTGGAGGAGAAAGATGGGAAGCTTTGGATGGGAAGTGTATTG ATGTCCTTCATTGCCGTATATGACTTGCCTTAG

Peptide Sequence

PEP ID	AT1G08470.1
PEP Infomation	\| strictosidine synthase-like 3 \| Chr1:2682262-2683977 REVERSE LENGTH=390 \| 201606
Sequence	MAMSILAKIFLVFAIYCAIDPFSHSSISKFPDFKTYKIDMPPLSSLPKERDRQNLLQNSE IRFLNEVQGPESIAFDPQGRGPYTGVADGRILFWNGTRWTDFAYTSNNRSELCDPKPSLL DYLKDEDICGRPLGLRFDKKNGDLYIADAYLGIMKVGPEGGLATSVTNEADGVPLRFTND LDIDDEGNVYFTDSSSFFQRRKFMLLIVSGEDSGRVLKYNPKTKETTTLVRNLQFPNGLS LGKDGSFFIFCEGSIGRLRKYWLKGEKAGTSEVVALLHGFPDNIRTNKDGDFWVAVHCHR NIFTHLMAHYPRVRKFFLKLPISVKFQYLLQVGGWPHAVAVKYSEEGKVLKVLEDSKGKV VKAVSEVEEKDGKLWMGSVLMSFIAVYDLP

Transcript Sequence

Transcript ID	AT1G08470.1
Transcript Infomation	\| strictosidine synthase-like 3 \| Chr1:2682058-2684171 REVERSE LENGTH=1571 \| 201606
Sequence	CAGATTAGCCGATTTGCAATTGCTCCTTGACTTTTCTTAATATATCGAAAAAGAGCAGCA ATTGAGAAAAGTTTTAAATTTTCAACCAGAAAAGTGTACTCTACTGCAACTACTTCTTCT CTACTTCTCTACCTTAAAACTTCCCCAACCATTTTCTTCTTCAAATCATCATCATCATCC CTCGTACAAAGAAAATGGCCATGAGCATACTCGCGAAGATCTTTCTCGTCTTTGCCATCT ATTGCGCTATCGATCCCTTCAGTCACAGCTCCATTTCCAAGTTCCCGGATTTCAAAACTT ACAAGATTGACATGCCTCCGTTATCGTCACTTCCAAAGGAGAGAGACCGCCAGAATCTGT TGCAGAATTCAGAGATCAGGTTTCTTAACGAGGTTCAAGGTCCCGAGAGCATTGCTTTCG ATCCGCAAGGTCGTGGTCCTTATACCGGAGTCGCCGACGGTCGAATTCTCTTTTGGAATG GCACTCGTTGGACAGATTTCGCATATACTTCGAACAATCGGTCAGAGCTATGTGATCCTA AGCCATCGCTTTTGGATTACTTAAAGGATGAAGATATCTGTGGTCGGCCTTTAGGTCTTC GATTCGACAAGAAAAATGGGGATTTGTACATTGCAGATGCGTATTTGGGGATAATGAAAG TTGGTCCGGAAGGAGGTTTAGCAACTTCTGTTACAAACGAGGCTGATGGTGTGCCTTTGA GATTTACCAATGATCTTGACATTGATGATGAAGGCAATGTTTACTTTACTGATAGCAGCT CTTTCTTCCAACGAAGGAAATTTATGCTTTTGATTGTCTCGGGGGAAGACAGTGGGAGGG TGTTGAAATACAATCCAAAAACAAAGGAGACTACCACTCTCGTGAGAAATCTCCAGTTTC CTAACGGATTATCCCTCGGCAAAGACGGCTCCTTTTTCATCTTTTGTGAAGGATCTATTG GAAGATTACGGAAATACTGGTTGAAAGGGGAGAAAGCTGGAACGTCAGAAGTGGTAGCTC TATTACATGGGTTCCCAGACAACATCCGCACAAACAAAGATGGAGATTTCTGGGTGGCGG TGCACTGCCACAGAAACATATTCACACACTTGATGGCGCATTACCCGAGGGTGAGGAAGT TCTTTCTGAAGCTGCCGATATCAGTGAAGTTTCAGTACTTGCTGCAGGTAGGTGGTTGGC CTCATGCTGTAGCTGTGAAGTACAGTGAAGAAGGGAAAGTGCTAAAGGTGTTGGAAGATA GTAAAGGGAAAGTGGTGAAGGCAGTGAGTGAAGTGGAGGAGAAAGATGGGAAGCTTTGGA TGGGAAGTGTATTGATGTCCTTCATTGCCGTATATGACTTGCCTTAGTTCGTTTCTTTTT CTATTCAAATTTGTATATTTCTAGTTTGGCTATGGGATTGCAATATGCATCTCGTTATCA AACTATATTTGACGTAATCAATTCAAACACAAACAATTACTAAATACAGTATCCTTTTTG CCATGTCTTTAGTCAATTAGTCTTTCAATGAGCTAAAGTTTTTCGGGTTTTTTTTCTTTT TTTTCTTTTTC