Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G08130.1
CDS Infomation	\| DNA ligase 1 \| Chr1:2542913-2547815 REVERSE LENGTH=2373 \| 201606
Sequence	ATGTTAGCGATTCGATCGTCGAATTACCTCCGATGCATACCTTCTCTCTGTACTAAAACC CAAATCTCTCAATTCTCCTCCGTGTTAATCTCTTTTAGCCGCCAAATTTCCCACTTGCGT CTTAGCTCGTGCCATAGAGCCATGTCTTCTTCCCGCCCTTCTGCATTTGATGCTCTCATG TCCAATGCTCGTGCAGCCGCCAAGAAGAAGACTCCCCAGACAACTAATTTGTCTCGCTCG CCGAACAAAAGGAAAATTGGAGAAACCCAAGATGCTAATTTGGGCAAAACTATTGTTTCC GAAGGTACACTTCCAAAAACGGAGGATCTGCTGGAGCCTGTTTCTGATTCTGCAAATCCC AGATCGGATACATCGTCAATTGCGGAGGATTCAAAGACGGGAGCGAAAAAGGCTAAGACT TTGAGCAAGACAGACGAAATGAAGAGCAAAATTGGATTGCTGAAGAAGAAGCCGAATGAT TTCGATCCTGAAAAAATGTCTTGCTGGGAGAAAGGGGAGAGAGTTCCGTTTCTGTTTGTC GCATTGGCTTTTGATCTGATCTCAAATGAAAGTGGCCGGATTGTGATTACTGATATTCTG TGTAACATGTTGAGAACTGTTATTGCCACTACTCCTGAGGATTTGGTCGCTACTGTTTAT CTTTCGGCGAATGAGATTGCCCCGGCTCATGAAGGTGTAGAATTGGGAATTGGTGAGAGT ACAATTATCAAGGCTATCTCTGAGGCTTTTGGTAGAACTGAGGATCATGTTAAGAAGCAG AATACGGAACTGGGAGACTTGGGACTTGTAGCAAAAGGAAGCCGTTCGACTCAGACTATG ATGTTCAAGCCCGAACCATTGACTGTTGTCAAGGTTTTCGATACGTTTCGACAAATTGCT AAGGAAAGTGGAAAAGATAGTAATGAAAAGAAGAAGAATCGAATGAAGGCACTTCTTGTG GCGACAACAGACTGTGAACCTCTTTACTTAACACGATTACTTCAGGCAAAATTGCGGTTA GGGTTCTCAGGTCAGACTGTCTTAGCCGCATTGGGACAAGCCGCTGTATATAATGAAGAG CACTCAAAGCCACCCCCAAATACCAAGTCTCCTTTAGAAGAGGCTGCAAAGATTGTTAAA CAAGTATTCACTGTACTTCCTGTCTATGACATTATTGTTCCTGCTCTTCTAAGTGGCGGT GTGTGGAATCTTCCAAAAACTTGTAACTTTACATTGGGTGTTCCAATTGGACCCATGCTT GCAAAACCAACCAAAGGTGTAGCTGAGATACTGAATAAATTCCAGGACATCGTTTTCACA TGTGAATACAAATATGATGGGGAACGTGCACAGATACATTTTATGGAGGATGGTACATTT GAGATATACAGTCGAAATGCTGAAAGAAACACTGGGAAGTACCCGGATGTTGCTCTTGCG TTATCAAGATTAAAGAAGCCTTCTGTGAAATCTTTTATTCTGGATTGTGAAGTTGTTGCT TTCGACAGGGAGAAAAAGAAAATTCTTCCGTTCCAGATTTTGAGCACTCGAGCCCGTAAA AATGTGAATGTCAATGATATCAAGGTTGGCGTATGCATCTTTGCTTTTGACATGTTATAT CTAAATGGCCAACAACTTATCCAGGAGAATCTTAAAATTCGCCGAGAGAAGCTATACGAA TCATTTGAGGAAGATCCTGGGTATTTCCAGTTTGCAACTGCTGTAACATCTAACGATATC GATGAAATACAAAAGTTTCTTGACGCTTCTGTTGATGTTGGCTGCGAAGGTTTAATCATT AAAACATTGGACTCAGATGCTACCTATGAGCCTGCAAAGCGATCAAATAATTGGCTAAAA CTGAAGAAAGACTATATGGACAGCATTGGGGACTCTGTGGATCTTGTACCAATTGCTGCT TTCCATGGACGTGGAAAACGCACAGGTGTCTATGGTGCATTTTTACTCGCTTGCTATGAT GTTGATAAGGAAGAGTTCCAGAGCATTTGTAAAATTGGTACTGGATTTTCTGATGCCATG CTTGACGAGCGGTCGTCCAGTCTTCGCTCTCAAGTGATTGCTACTCCAAAACAATACTAC CGAGTTGGAGACAGCCTCAATCCAGATGTTTGGTTTGAGCCCACTGAGGTCTGGGAAGTG AAAGCAGCTGACTTAACAATTAGCCCTGTGCACCGTGCAGCTACTGGCATAGTGGATCCT GATAAGGGGATTTCTCTTCGTTTTCCTCGTCTACTTCGTGTACGGGAAGACAAGAAGCCC GAGGAAGCAACATCATCTGAGCAGATTGCTGATTTGTACCAAGCTCAGAAACACAATCAT CCAAGTAATGAAGTCAAAGGTGACGATGATTGA

Peptide Sequence

PEP ID	AT1G08130.1
PEP Infomation	\| DNA ligase 1 \| Chr1:2542913-2547815 REVERSE LENGTH=790 \| 201606
Sequence	MLAIRSSNYLRCIPSLCTKTQISQFSSVLISFSRQISHLRLSSCHRAMSSSRPSAFDALM SNARAAAKKKTPQTTNLSRSPNKRKIGETQDANLGKTIVSEGTLPKTEDLLEPVSDSANP RSDTSSIAEDSKTGAKKAKTLSKTDEMKSKIGLLKKKPNDFDPEKMSCWEKGERVPFLFV ALAFDLISNESGRIVITDILCNMLRTVIATTPEDLVATVYLSANEIAPAHEGVELGIGES TIIKAISEAFGRTEDHVKKQNTELGDLGLVAKGSRSTQTMMFKPEPLTVVKVFDTFRQIA KESGKDSNEKKKNRMKALLVATTDCEPLYLTRLLQAKLRLGFSGQTVLAALGQAAVYNEE HSKPPPNTKSPLEEAAKIVKQVFTVLPVYDIIVPALLSGGVWNLPKTCNFTLGVPIGPML AKPTKGVAEILNKFQDIVFTCEYKYDGERAQIHFMEDGTFEIYSRNAERNTGKYPDVALA LSRLKKPSVKSFILDCEVVAFDREKKKILPFQILSTRARKNVNVNDIKVGVCIFAFDMLY LNGQQLIQENLKIRREKLYESFEEDPGYFQFATAVTSNDIDEIQKFLDASVDVGCEGLII KTLDSDATYEPAKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKRTGVYGAFLLACYD VDKEEFQSICKIGTGFSDAMLDERSSSLRSQVIATPKQYYRVGDSLNPDVWFEPTEVWEV KAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQKHNH PSNEVKGDDD

Transcript Sequence

Transcript ID	AT1G08130.1
Transcript Infomation	\| DNA ligase 1 \| Chr1:2542663-2547946 REVERSE LENGTH=2754 \| 201606
Sequence	CCTAATTTGGCCCAACATAAAGGAGAGAGTGGCGGGTGAGAAATTCTGCCGCCAATATAT TATCACCTTTCTTCAAGGTTGCAAACTTGCAACACCTGTCCTTTCTAAAACCCTAATTTC AAAATCGACTGATGTTAGCGATTCGATCGTCGAATTACCTCCGATGCATACCTTCTCTCT GTACTAAAACCCAAATCTCTCAATTCTCCTCCGTGTTAATCTCTTTTAGCCGCCAAATTT CCCACTTGCGTCTTAGCTCGTGCCATAGAGCCATGTCTTCTTCCCGCCCTTCTGCATTTG ATGCTCTCATGTCCAATGCTCGTGCAGCCGCCAAGAAGAAGACTCCCCAGACAACTAATT TGTCTCGCTCGCCGAACAAAAGGAAAATTGGAGAAACCCAAGATGCTAATTTGGGCAAAA CTATTGTTTCCGAAGGTACACTTCCAAAAACGGAGGATCTGCTGGAGCCTGTTTCTGATT CTGCAAATCCCAGATCGGATACATCGTCAATTGCGGAGGATTCAAAGACGGGAGCGAAAA AGGCTAAGACTTTGAGCAAGACAGACGAAATGAAGAGCAAAATTGGATTGCTGAAGAAGA AGCCGAATGATTTCGATCCTGAAAAAATGTCTTGCTGGGAGAAAGGGGAGAGAGTTCCGT TTCTGTTTGTCGCATTGGCTTTTGATCTGATCTCAAATGAAAGTGGCCGGATTGTGATTA CTGATATTCTGTGTAACATGTTGAGAACTGTTATTGCCACTACTCCTGAGGATTTGGTCG CTACTGTTTATCTTTCGGCGAATGAGATTGCCCCGGCTCATGAAGGTGTAGAATTGGGAA TTGGTGAGAGTACAATTATCAAGGCTATCTCTGAGGCTTTTGGTAGAACTGAGGATCATG TTAAGAAGCAGAATACGGAACTGGGAGACTTGGGACTTGTAGCAAAAGGAAGCCGTTCGA CTCAGACTATGATGTTCAAGCCCGAACCATTGACTGTTGTCAAGGTTTTCGATACGTTTC GACAAATTGCTAAGGAAAGTGGAAAAGATAGTAATGAAAAGAAGAAGAATCGAATGAAGG CACTTCTTGTGGCGACAACAGACTGTGAACCTCTTTACTTAACACGATTACTTCAGGCAA AATTGCGGTTAGGGTTCTCAGGTCAGACTGTCTTAGCCGCATTGGGACAAGCCGCTGTAT ATAATGAAGAGCACTCAAAGCCACCCCCAAATACCAAGTCTCCTTTAGAAGAGGCTGCAA AGATTGTTAAACAAGTATTCACTGTACTTCCTGTCTATGACATTATTGTTCCTGCTCTTC TAAGTGGCGGTGTGTGGAATCTTCCAAAAACTTGTAACTTTACATTGGGTGTTCCAATTG GACCCATGCTTGCAAAACCAACCAAAGGTGTAGCTGAGATACTGAATAAATTCCAGGACA TCGTTTTCACATGTGAATACAAATATGATGGGGAACGTGCACAGATACATTTTATGGAGG ATGGTACATTTGAGATATACAGTCGAAATGCTGAAAGAAACACTGGGAAGTACCCGGATG TTGCTCTTGCGTTATCAAGATTAAAGAAGCCTTCTGTGAAATCTTTTATTCTGGATTGTG AAGTTGTTGCTTTCGACAGGGAGAAAAAGAAAATTCTTCCGTTCCAGATTTTGAGCACTC GAGCCCGTAAAAATGTGAATGTCAATGATATCAAGGTTGGCGTATGCATCTTTGCTTTTG ACATGTTATATCTAAATGGCCAACAACTTATCCAGGAGAATCTTAAAATTCGCCGAGAGA AGCTATACGAATCATTTGAGGAAGATCCTGGGTATTTCCAGTTTGCAACTGCTGTAACAT CTAACGATATCGATGAAATACAAAAGTTTCTTGACGCTTCTGTTGATGTTGGCTGCGAAG GTTTAATCATTAAAACATTGGACTCAGATGCTACCTATGAGCCTGCAAAGCGATCAAATA ATTGGCTAAAACTGAAGAAAGACTATATGGACAGCATTGGGGACTCTGTGGATCTTGTAC CAATTGCTGCTTTCCATGGACGTGGAAAACGCACAGGTGTCTATGGTGCATTTTTACTCG CTTGCTATGATGTTGATAAGGAAGAGTTCCAGAGCATTTGTAAAATTGGTACTGGATTTT CTGATGCCATGCTTGACGAGCGGTCGTCCAGTCTTCGCTCTCAAGTGATTGCTACTCCAA AACAATACTACCGAGTTGGAGACAGCCTCAATCCAGATGTTTGGTTTGAGCCCACTGAGG TCTGGGAAGTGAAAGCAGCTGACTTAACAATTAGCCCTGTGCACCGTGCAGCTACTGGCA TAGTGGATCCTGATAAGGGGATTTCTCTTCGTTTTCCTCGTCTACTTCGTGTACGGGAAG ACAAGAAGCCCGAGGAAGCAACATCATCTGAGCAGATTGCTGATTTGTACCAAGCTCAGA AACACAATCATCCAAGTAATGAAGTCAAAGGTGACGATGATTGAACAACAGTAATCTGGC CTCAGAGCACATTTCCTCGTATGTACGACATTGCTCGTAACTTGCTAATGATGCACATTG CGTGTTTGAGTTTTCAACTGTAACTGCTTATGTAAAACTGCTTTTAGGAAAAGTGAATGA AAGGTTCTGGAAAAAAATTGGTACACTCATCAACTGACTCTGGAATGAATAAAAACACTG CCCTGATTGACATCACTGAGCTATCTATGATTGGCAGAAATGTGGAATATGTTT