Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G07230.1
CDS Infomation	\| non-specific phospholipase C1 \| Chr1:2220509-2222778 REVERSE LENGTH=1602 \| 201606
Sequence	ATGGCTTTCCGGCGAGTGTTAACCACTGTAATCCTCTTCTGCTACTTACTAATTTCATCT CAATCCATTGAATTCAAAAACTCCCAGAAACCCCACAAGATCCAAGGACCAATCAAGACT ATAGTCGTTGTAGTCATGGAGAATCGCTCCTTCGATCACATCCTCGGTTGGCTCAAATCG ACCCGACCCGAAATCGACGGATTAACCGGCAAAGAGTCAAATCCCCTCAACGTCTCCGAT CCAAATTCCAAAAAGATCTTCGTCTCAGACGACGCCGTCTTCGTAGACATGGATCCGGGT CACTCATTCCAAGCGATCCGAGAACAGATATTCGGGTCTAACGATACATCCGGCGACCCG AAAATGAACGGATTCGCACAGCAATCAGAGAGTATGGAGCCTGGAATGGCTAAGAACGTT ATGAGCGGGTTCAAACCCGAAGTCTTACCGGTTTACACCGAGTTAGCGAACGAGTTCGGA GTTTTCGATCGATGGTTCGCTTCAGTACCAACTTCGACTCAACCGAATCGGTTCTACGTT CACTCAGCTACTTCTCATGGATGCTCAAGCAACGTGAAGAAAGATCTCGTTAAAGGGTTT CCTCAAAAGACGATCTTTGATTCGTTAGATGAGAACGGACTCAGTTTTGGGATTTATTAC CAAAACATCCCTGCGACGTTCTTCTTCAAGTCTCTTCGTAGGCTTAAGCATTTGGTGAAA TTCCATAGCTATGCACTTAAGTTCAAGCTCGACGCTAAGCTTGGGAAGCTTCCGAATTAT TCTGTCGTGGAACAGAGATATTTCGATATCGATCTTTTTCCGGCTAATGATGATCATCCG TCGCATGACGTGGCGGCGGGTCAACGGTTTGTTAAGGAAGTTTATGAGACGTTACGGAGT AGTCCACAGTGGAAAGAGATGGCTTTGCTCATTACTTATGATGAGCACGGTGGGTTTTAT GACCATGTTCCCACGCCGGTTAAAGGTGTGCCTAACCCTGATGGTATCATTGGACCTGAT CCGTTTTACTTTGGGTTTGACCGATTGGGTGTTCGGGTCCCTACCTTTCTGATCTCCCCC TGGATTGAGAAGGGCACTGTGATACATGAACCTGAAGGTCCAACACCACATTCACAATTT GAGCATTCTTCTATCCCTGCAACGGTGAAGAAACTCTTCAACCTAAAGTCTCACTTCCTT ACAAAGAGAGATGCATGGGCTGGTACATTTGAGAAATACTTCCGTATCCGAGATTCTCCT CGCCAAGATTGTCCAGAGAAACTGCCGGAAGTGAAACTATCGCTGAGGCCATGGGGAGCA AAAGAAGACTCAAAGCTCTCAGAATTCCAGGTGGAGCTGATCCAACTGGCCTCTCAACTC GTTGGAGACCATCTCCTAAACTCATATCCAGACATTGGGAAGAACATGACAGTAAGTGAA GGCAACAAATACGCAGAAGACGCTGTTCAGAAGTTTCTGGAAGCAGGGATGGCTGCACTG GAAGCAGGAGCAGACGAAAACACTATAGTCACTATGAGGCCGTCTCTGACAACCAGGACC AGTCCCAGTGAAGGGACCAACAAGTATATTGGAAGCTACTGA

Peptide Sequence

PEP ID	AT1G07230.1
PEP Infomation	\| non-specific phospholipase C1 \| Chr1:2220509-2222778 REVERSE LENGTH=533 \| 201606
Sequence	MAFRRVLTTVILFCYLLISSQSIEFKNSQKPHKIQGPIKTIVVVVMENRSFDHILGWLKS TRPEIDGLTGKESNPLNVSDPNSKKIFVSDDAVFVDMDPGHSFQAIREQIFGSNDTSGDP KMNGFAQQSESMEPGMAKNVMSGFKPEVLPVYTELANEFGVFDRWFASVPTSTQPNRFYV HSATSHGCSSNVKKDLVKGFPQKTIFDSLDENGLSFGIYYQNIPATFFFKSLRRLKHLVK FHSYALKFKLDAKLGKLPNYSVVEQRYFDIDLFPANDDHPSHDVAAGQRFVKEVYETLRS SPQWKEMALLITYDEHGGFYDHVPTPVKGVPNPDGIIGPDPFYFGFDRLGVRVPTFLISP WIEKGTVIHEPEGPTPHSQFEHSSIPATVKKLFNLKSHFLTKRDAWAGTFEKYFRIRDSP RQDCPEKLPEVKLSLRPWGAKEDSKLSEFQVELIQLASQLVGDHLLNSYPDIGKNMTVSE GNKYAEDAVQKFLEAGMAALEAGADENTIVTMRPSLTTRTSPSEGTNKYIGSY

Transcript Sequence

Transcript ID	AT1G07230.1
Transcript Infomation	\| non-specific phospholipase C1 \| Chr1:2220181-2223018 REVERSE LENGTH=2170 \| 201606
Sequence	GTTTAAGATAGTTTTTATGTTTAGAAAAGGAATGTTAGATCCAAAGAGGACTTTTTTCAG CTTCATTGCTCTCTTAAAATCTGTGGTAATCTCTCTTCCATTGTTATTCTTCAAGTAAAT AATGCCCTTTGCTCCTCTCTCAACACCATTTATCTTATAAACCCTAGACACTCCGCCGAA TTTTTACCCTTCTCCACTGGTCATCCGCGTTTTTTTTCCGGGTCTAAGGTCACCGGAAAA ATGGCTTTCCGGCGAGTGTTAACCACTGTAATCCTCTTCTGCTACTTACTAATTTCATCT CAATCCATTGAATTCAAAAACTCCCAGAAACCCCACAAGATCCAAGGACCAATCAAGACT ATAGTCGTTGTAGTCATGGAGAATCGCTCCTTCGATCACATCCTCGGTTGGCTCAAATCG ACCCGACCCGAAATCGACGGATTAACCGGCAAAGAGTCAAATCCCCTCAACGTCTCCGAT CCAAATTCCAAAAAGATCTTCGTCTCAGACGACGCCGTCTTCGTAGACATGGATCCGGGT CACTCATTCCAAGCGATCCGAGAACAGATATTCGGGTCTAACGATACATCCGGCGACCCG AAAATGAACGGATTCGCACAGCAATCAGAGAGTATGGAGCCTGGAATGGCTAAGAACGTT ATGAGCGGGTTCAAACCCGAAGTCTTACCGGTTTACACCGAGTTAGCGAACGAGTTCGGA GTTTTCGATCGATGGTTCGCTTCAGTACCAACTTCGACTCAACCGAATCGGTTCTACGTT CACTCAGCTACTTCTCATGGATGCTCAAGCAACGTGAAGAAAGATCTCGTTAAAGGGTTT CCTCAAAAGACGATCTTTGATTCGTTAGATGAGAACGGACTCAGTTTTGGGATTTATTAC CAAAACATCCCTGCGACGTTCTTCTTCAAGTCTCTTCGTAGGCTTAAGCATTTGGTGAAA TTCCATAGCTATGCACTTAAGTTCAAGCTCGACGCTAAGCTTGGGAAGCTTCCGAATTAT TCTGTCGTGGAACAGAGATATTTCGATATCGATCTTTTTCCGGCTAATGATGATCATCCG TCGCATGACGTGGCGGCGGGTCAACGGTTTGTTAAGGAAGTTTATGAGACGTTACGGAGT AGTCCACAGTGGAAAGAGATGGCTTTGCTCATTACTTATGATGAGCACGGTGGGTTTTAT GACCATGTTCCCACGCCGGTTAAAGGTGTGCCTAACCCTGATGGTATCATTGGACCTGAT CCGTTTTACTTTGGGTTTGACCGATTGGGTGTTCGGGTCCCTACCTTTCTGATCTCCCCC TGGATTGAGAAGGGCACTGTGATACATGAACCTGAAGGTCCAACACCACATTCACAATTT GAGCATTCTTCTATCCCTGCAACGGTGAAGAAACTCTTCAACCTAAAGTCTCACTTCCTT ACAAAGAGAGATGCATGGGCTGGTACATTTGAGAAATACTTCCGTATCCGAGATTCTCCT CGCCAAGATTGTCCAGAGAAACTGCCGGAAGTGAAACTATCGCTGAGGCCATGGGGAGCA AAAGAAGACTCAAAGCTCTCAGAATTCCAGGTGGAGCTGATCCAACTGGCCTCTCAACTC GTTGGAGACCATCTCCTAAACTCATATCCAGACATTGGGAAGAACATGACAGTAAGTGAA GGCAACAAATACGCAGAAGACGCTGTTCAGAAGTTTCTGGAAGCAGGGATGGCTGCACTG GAAGCAGGAGCAGACGAAAACACTATAGTCACTATGAGGCCGTCTCTGACAACCAGGACC AGTCCCAGTGAAGGGACCAACAAGTATATTGGAAGCTACTGAAATCTATAACTAAAAAAC GGATTTTATGTAAATATATGTGCCCTCTGCATGTACCCACTTTTACTTAGATGCATATAT GATGTGGTGAAAGTATATATATTATATAATGGATCAAAGAATATGGTAACGGAATGTAGT ACCCTTGCGATGATTGTCGGGTATGGCCTCCATCTCCATAGTTGGAATGGATCGAGGCTT CCTGTAATACTAAAATGTATCCTTATCCTAAAATAGACAAAGAATCATTGTATTATATAT AGATTGGGCCCATCTGATTGGCTAATCCGATCCTCCCAGCTCTTTCTTGGATGTTGAAGT TTAAAGTGCA