Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G05910.1
CDS Infomation	\| cell division cycle protein 48-related / CDC48-like protein \| Chr1:1790796-1796503 FORWARD LENGTH=3633 \| 201606
Sequence	ATGCATCCCAAGCGATCAAGTCAAGGAGATGGTTCAGTTACTAAGCCAGTTAGAACCAGT GATAGGCTTAGGAGGAGGCCCAAATTGCATGGTCGCTCATACTTGTACTACTCTTCACCA AACATGTTACATAATCGGAAAAGAAACACAAAGACAAGAACGGCAGCCTCTCAGATCGCA AAGATGCTGCACAAAGGAAACCGTCCAGCGAGGGCATCAAATGCCGCGCCAATTGCATCT GATCTCCGGCGTTCCACGAGGAAGAGAAGAATTTCTGTAAACCTGGAGGACTATACAGAC AGTTCTGGAGCGGAGGATGAGGATATGATGAGTCCAGCATATCGAACTTTGAGGAGGAGA GTTCATAAAAACTTCTCAACTTCAAAAAGTAGAAAGGACATGGATGCTGAATTGGCACCA CGTCGTGAGGGTCTCCGTCCTCGTCGTTCAACAACAATTGCTAATAAACGACTGAAAACA GAATCTGGCGCTGACCAAGATACATCAGAAGAGAAAGATGGCCAAGATGAAACTGAGAAT GGGAATGAATTAGATGATGCGGATGATGGTGAAAATGAGGTTGAGGCTGAAGACGAGGGT AATGGAGAAGATGAAGGCGATGGCGAAGATGAGGGAGAAGAAGATGGTGATGATGATGAA GAGGGTGATGAAGAACAAGAGGGAAGGAAGAGATATGATCTGCGAAACCGTGCTGAAGTC CGGAGAATGCCTACGGGAGAAATCAACAAGCAACAACAACCTAGATCTCCTCGGAGAGTA TTGCATCAGGGCATGGGCACCAGGGTTGGAAGAGATGGTAGGAGAGGTGGGTCTCGGCCT CACAAGCGCCATCGCTTTACAAGAACAGATGATTCAGATGATTCTCTTCTTGTGGACGAG TTGGACCAGGGCCCTGCAATTCCCTGGGCTCGAGGTGGAAACAGATCTGGAGCACCTTGG CTATTTGGGGGTTTGGACACGTATGGGTCAAGTTCATTGGGGTTGAACGTTGGAGCTTCT GGTTGGGGTCACCAGAGTGATGGTTTGGCTGCATTAACTTCTGGTGTTCAGACTGCTGGC CCAAGCTCTAAAGGAGGTGCAGATATCCAGCCACTGCAGATTAATGAGGATATAAATTTT GATGACATTGGTGGGCTGTCCGAATACATTAATGATTTGAAGGAAATGGTTTTCTTTCCG TTGCTGTATCCAGAGTTCTTTGCAAGTTACAGCATTACTCCTCCCAGAGGTGTACTGCTG TGTGGTCCTCCAGGCACTGGTAAAACACTGATTGCTCGAGCATTAGCATGTGCTGCTTCA AAAGCTGGACAGAAAGTTAGCTTTTATATGCGGAAGGGTGCTGATGTTCTTAGTAAGTGG GTTGGCGAGGCTGAGAGACAGCTAAAGCTACTCTTTGAGGAGGCTCAGCGAAACCAGCCT TCCATAATCTTTTTTGATGAAATTGATGGTCTTGCTCCTGTAAGATCTAGCAAGCAGGAA CAAATACATAATTCTATTGTTTCAACTTTACTGGCGCTGATGGATGGCCTCGATTCTCGT GGTCAAGTTGTTCTCATTGGAGCAACAAACAGGGTAGATGCAATAGACGGAGCTTTACGC CGCCCTGGCAGATTCGATCGGGAGTTTAATTTTTCCTTACCAGGTTGCGAAGCACGAGCC GAAATATTGGATATTCACACTCGTAAATGGAAGCACCCACCTACTAGGGAGCTGAAAGAG GAACTGGCAGCTACTTGTGTAGGGTATTGTGGTGCTGATCTAAAAGCTTTGTGCACTGAA GCTGCGATTCGTGCTTTTCGTGAGAAATATCCACAAGTTTATACCAGTGATGATAAATAC GCCATAGATGTTGGGTTGGTTAATGTTGAAAAGAGCCACTTTGTAGAGGCAATGTCAGCT ATTACTCCTGCTGCCCATAGAGGGTCTGTTGTGCAATCCAGACCACTCTCTCCGGTTGTG TTGCCATGTTTACATCGACACCTCCTTGAATCCATGAGTTTAATATCAGATATTTTTCCC TCGTCAGCCACGTCATCGGAGTTGACGAAGCTGTCAATACTTACATTTGGATCTGCAATT CCTCTTGTTTATCGACCTCGACTTTTGCTGCTTGGTGGTGAAGGAGTTGGACTGGATCAT CTTGGGCCTGCAATTTTACATGAGCTAGAAAAGTTCCCTATTCATTCTCTGGGACTTCCA TCTCTCCTTTCGGATCCTGGTGCAAAGACCCCAGAAGAAGCGTTAGTACATATATTTAGT GAAGCTAGAAGAACAACACCTTCAATACTTTACATACCAATGTTCAATAATTGGTGGGAA AATGCTCATGAACAGCTTAGGGCTGTATTTCTGACTTTGTTAGAAGAATTGCCATCAAAT CTACCCATATTATTACTTGCTACATCTTATGGTGAATTGTCTGACATGGAAGAGCAGTCA GTATTTGACAATCGATCTGTCTATACTGTGGACAAACCATCAAGTGAAGACAGGTCTTTG TTCTTTGACCGTTTGATTGAAGCTGCTCTCTCAGTCATTTCTGGCTTAAATGGCAAACCT GATGGACCACAACCCCTTCCAGAACTTCCCAAGGTTCCAAAAGAACCTACTGGTCCAAAA CCCGCAGAAGTAAAAGCCAAGGTGGAAGCAGAGCAGCATGCCCTTCGGCGATTGCGTATG TGTCTCAGAGATGTTTGCAATAGAATACTATATGATAAAAGATTCAGCGCATTCCACTTT CCAGTTACTGACGAGGATGCTCCAAACTATCGCTCAATAATTCAAATTCCAATGGATACG GCTACTCTGCTGCAGCGTGTTGATACTGGGCAGTATCTGACATGTACACCGTTTTTGCAA GATGTGGATCTCATTGTGAGAAATGCCAAGGCTTACAATGGAGATGATTACGCTGGAGCG AGAATTGTCAGTAGAGCCTATGAGCTTCGAGATGTAGTGCATGGGATGCTGTCACAGATG GACCCAGCACTGCTAACATATTGTGATAAGATCGCAGCTGAAGGTGGTCCTTCACTGATA CCAGATGATCTGAGTGGATCAATCCTCGGTTTAGCTCCTGTTGTGCAGATGGGAACTGTT ACTAGAACCAGTGCCAGACTTCGAAATGTGCAGCCAGAGGTTAATTTAGATCGAGATTAT GAAGGTCTTAAAAAGCCCAAGAAAACTACTGATGCTGTCAGTATAGATTCAGCTGCAGAC AAATCACAGAACCAAGATTCAGGCCAAGAAATGCCATCTCCGGATGCGGCCAACCCACAG TCAGCAGCTCCTTCTCCAACAGATGGTGATAGAGAAGACCAAAGCGAGCCACCAAGTAAA GAGGCATCTGCAGAAGATATGAGTGGTGATTCTTGCAAGGGTCCTGCGGCCAAGTCGGAT AAAGAAATTTCAAGCCGAACAGAATCTGTAAAGGGAGTATTCATGGAACGTACTGACAAC TACAGCATTCCGCAGATGGAGAGGCTTTACACTCGAATCATGAAGGGTGTTCTTGAGACT CTGGACAAAGGGCTTCGTGATGATGATAATAATCCTAAGCATTCAATTTTGAGATTTTTG TCGGAATTCGCACAGCATCAGGCGAATTTCTGA

Peptide Sequence

PEP ID	AT1G05910.1
PEP Infomation	\| cell division cycle protein 48-related / CDC48-like protein \| Chr1:1790796-1796503 FORWARD LENGTH=1210 \| 201606
Sequence	MHPKRSSQGDGSVTKPVRTSDRLRRRPKLHGRSYLYYSSPNMLHNRKRNTKTRTAASQIA KMLHKGNRPARASNAAPIASDLRRSTRKRRISVNLEDYTDSSGAEDEDMMSPAYRTLRRR VHKNFSTSKSRKDMDAELAPRREGLRPRRSTTIANKRLKTESGADQDTSEEKDGQDETEN GNELDDADDGENEVEAEDEGNGEDEGDGEDEGEEDGDDDEEGDEEQEGRKRYDLRNRAEV RRMPTGEINKQQQPRSPRRVLHQGMGTRVGRDGRRGGSRPHKRHRFTRTDDSDDSLLVDE LDQGPAIPWARGGNRSGAPWLFGGLDTYGSSSLGLNVGASGWGHQSDGLAALTSGVQTAG PSSKGGADIQPLQINEDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLL CGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQP SIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALR RPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADLKALCTE AAIRAFREKYPQVYTSDDKYAIDVGLVNVEKSHFVEAMSAITPAAHRGSVVQSRPLSPVV LPCLHRHLLESMSLISDIFPSSATSSELTKLSILTFGSAIPLVYRPRLLLLGGEGVGLDH LGPAILHELEKFPIHSLGLPSLLSDPGAKTPEEALVHIFSEARRTTPSILYIPMFNNWWE NAHEQLRAVFLTLLEELPSNLPILLLATSYGELSDMEEQSVFDNRSVYTVDKPSSEDRSL FFDRLIEAALSVISGLNGKPDGPQPLPELPKVPKEPTGPKPAEVKAKVEAEQHALRRLRM CLRDVCNRILYDKRFSAFHFPVTDEDAPNYRSIIQIPMDTATLLQRVDTGQYLTCTPFLQ DVDLIVRNAKAYNGDDYAGARIVSRAYELRDVVHGMLSQMDPALLTYCDKIAAEGGPSLI PDDLSGSILGLAPVVQMGTVTRTSARLRNVQPEVNLDRDYEGLKKPKKTTDAVSIDSAAD KSQNQDSGQEMPSPDAANPQSAAPSPTDGDREDQSEPPSKEASAEDMSGDSCKGPAAKSD KEISSRTESVKGVFMERTDNYSIPQMERLYTRIMKGVLETLDKGLRDDDNNPKHSILRFL SEFAQHQANF

Transcript Sequence

Transcript ID	AT1G05910.1
Transcript Infomation	\| cell division cycle protein 48-related / CDC48-like protein \| Chr1:1790216-1796715 FORWARD LENGTH=4018 \| 201606
Sequence	AAAAAAAGAAAAAACGTTCGAAGAGGAAAAAAAAAAAAGAGGGAGAAGAGCAACGAAGAC GGACCTGCAAATTCTGCAGTCTCCACTGACACTTTCGATCTTTCTCTCTGTCCACTTTCT TCAATCCTCAGTTGTTTATGGAAGGAGATAACCATCAGAGGTAGCATTTATCCATGCATC CCAAGCGATCAAGTCAAGGAGATGGTTCAGTTACTAAGCCAGTTAGAACCAGTGATAGGC TTAGGAGGAGGCCCAAATTGCATGGTCGCTCATACTTGTACTACTCTTCACCAAACATGT TACATAATCGGAAAAGAAACACAAAGACAAGAACGGCAGCCTCTCAGATCGCAAAGATGC TGCACAAAGGAAACCGTCCAGCGAGGGCATCAAATGCCGCGCCAATTGCATCTGATCTCC GGCGTTCCACGAGGAAGAGAAGAATTTCTGTAAACCTGGAGGACTATACAGACAGTTCTG GAGCGGAGGATGAGGATATGATGAGTCCAGCATATCGAACTTTGAGGAGGAGAGTTCATA AAAACTTCTCAACTTCAAAAAGTAGAAAGGACATGGATGCTGAATTGGCACCACGTCGTG AGGGTCTCCGTCCTCGTCGTTCAACAACAATTGCTAATAAACGACTGAAAACAGAATCTG GCGCTGACCAAGATACATCAGAAGAGAAAGATGGCCAAGATGAAACTGAGAATGGGAATG AATTAGATGATGCGGATGATGGTGAAAATGAGGTTGAGGCTGAAGACGAGGGTAATGGAG AAGATGAAGGCGATGGCGAAGATGAGGGAGAAGAAGATGGTGATGATGATGAAGAGGGTG ATGAAGAACAAGAGGGAAGGAAGAGATATGATCTGCGAAACCGTGCTGAAGTCCGGAGAA TGCCTACGGGAGAAATCAACAAGCAACAACAACCTAGATCTCCTCGGAGAGTATTGCATC AGGGCATGGGCACCAGGGTTGGAAGAGATGGTAGGAGAGGTGGGTCTCGGCCTCACAAGC GCCATCGCTTTACAAGAACAGATGATTCAGATGATTCTCTTCTTGTGGACGAGTTGGACC AGGGCCCTGCAATTCCCTGGGCTCGAGGTGGAAACAGATCTGGAGCACCTTGGCTATTTG GGGGTTTGGACACGTATGGGTCAAGTTCATTGGGGTTGAACGTTGGAGCTTCTGGTTGGG GTCACCAGAGTGATGGTTTGGCTGCATTAACTTCTGGTGTTCAGACTGCTGGCCCAAGCT CTAAAGGAGGTGCAGATATCCAGCCACTGCAGATTAATGAGGATATAAATTTTGATGACA TTGGTGGGCTGTCCGAATACATTAATGATTTGAAGGAAATGGTTTTCTTTCCGTTGCTGT ATCCAGAGTTCTTTGCAAGTTACAGCATTACTCCTCCCAGAGGTGTACTGCTGTGTGGTC CTCCAGGCACTGGTAAAACACTGATTGCTCGAGCATTAGCATGTGCTGCTTCAAAAGCTG GACAGAAAGTTAGCTTTTATATGCGGAAGGGTGCTGATGTTCTTAGTAAGTGGGTTGGCG AGGCTGAGAGACAGCTAAAGCTACTCTTTGAGGAGGCTCAGCGAAACCAGCCTTCCATAA TCTTTTTTGATGAAATTGATGGTCTTGCTCCTGTAAGATCTAGCAAGCAGGAACAAATAC ATAATTCTATTGTTTCAACTTTACTGGCGCTGATGGATGGCCTCGATTCTCGTGGTCAAG TTGTTCTCATTGGAGCAACAAACAGGGTAGATGCAATAGACGGAGCTTTACGCCGCCCTG GCAGATTCGATCGGGAGTTTAATTTTTCCTTACCAGGTTGCGAAGCACGAGCCGAAATAT TGGATATTCACACTCGTAAATGGAAGCACCCACCTACTAGGGAGCTGAAAGAGGAACTGG CAGCTACTTGTGTAGGGTATTGTGGTGCTGATCTAAAAGCTTTGTGCACTGAAGCTGCGA TTCGTGCTTTTCGTGAGAAATATCCACAAGTTTATACCAGTGATGATAAATACGCCATAG ATGTTGGGTTGGTTAATGTTGAAAAGAGCCACTTTGTAGAGGCAATGTCAGCTATTACTC CTGCTGCCCATAGAGGGTCTGTTGTGCAATCCAGACCACTCTCTCCGGTTGTGTTGCCAT GTTTACATCGACACCTCCTTGAATCCATGAGTTTAATATCAGATATTTTTCCCTCGTCAG CCACGTCATCGGAGTTGACGAAGCTGTCAATACTTACATTTGGATCTGCAATTCCTCTTG TTTATCGACCTCGACTTTTGCTGCTTGGTGGTGAAGGAGTTGGACTGGATCATCTTGGGC CTGCAATTTTACATGAGCTAGAAAAGTTCCCTATTCATTCTCTGGGACTTCCATCTCTCC TTTCGGATCCTGGTGCAAAGACCCCAGAAGAAGCGTTAGTACATATATTTAGTGAAGCTA GAAGAACAACACCTTCAATACTTTACATACCAATGTTCAATAATTGGTGGGAAAATGCTC ATGAACAGCTTAGGGCTGTATTTCTGACTTTGTTAGAAGAATTGCCATCAAATCTACCCA TATTATTACTTGCTACATCTTATGGTGAATTGTCTGACATGGAAGAGCAGTCAGTATTTG ACAATCGATCTGTCTATACTGTGGACAAACCATCAAGTGAAGACAGGTCTTTGTTCTTTG ACCGTTTGATTGAAGCTGCTCTCTCAGTCATTTCTGGCTTAAATGGCAAACCTGATGGAC CACAACCCCTTCCAGAACTTCCCAAGGTTCCAAAAGAACCTACTGGTCCAAAACCCGCAG AAGTAAAAGCCAAGGTGGAAGCAGAGCAGCATGCCCTTCGGCGATTGCGTATGTGTCTCA GAGATGTTTGCAATAGAATACTATATGATAAAAGATTCAGCGCATTCCACTTTCCAGTTA CTGACGAGGATGCTCCAAACTATCGCTCAATAATTCAAATTCCAATGGATACGGCTACTC TGCTGCAGCGTGTTGATACTGGGCAGTATCTGACATGTACACCGTTTTTGCAAGATGTGG ATCTCATTGTGAGAAATGCCAAGGCTTACAATGGAGATGATTACGCTGGAGCGAGAATTG TCAGTAGAGCCTATGAGCTTCGAGATGTAGTGCATGGGATGCTGTCACAGATGGACCCAG CACTGCTAACATATTGTGATAAGATCGCAGCTGAAGGTGGTCCTTCACTGATACCAGATG ATCTGAGTGGATCAATCCTCGGTTTAGCTCCTGTTGTGCAGATGGGAACTGTTACTAGAA CCAGTGCCAGACTTCGAAATGTGCAGCCAGAGGTTAATTTAGATCGAGATTATGAAGGTC TTAAAAAGCCCAAGAAAACTACTGATGCTGTCAGTATAGATTCAGCTGCAGACAAATCAC AGAACCAAGATTCAGGCCAAGAAATGCCATCTCCGGATGCGGCCAACCCACAGTCAGCAG CTCCTTCTCCAACAGATGGTGATAGAGAAGACCAAAGCGAGCCACCAAGTAAAGAGGCAT CTGCAGAAGATATGAGTGGTGATTCTTGCAAGGGTCCTGCGGCCAAGTCGGATAAAGAAA TTTCAAGCCGAACAGAATCTGTAAAGGGAGTATTCATGGAACGTACTGACAACTACAGCA TTCCGCAGATGGAGAGGCTTTACACTCGAATCATGAAGGGTGTTCTTGAGACTCTGGACA AAGGGCTTCGTGATGATGATAATAATCCTAAGCATTCAATTTTGAGATTTTTGTCGGAAT TCGCACAGCATCAGGCGAATTTCTGAATCTAAATTTTCTCATATCGGTCACTAGGATAGG TTTGCTAGGAGAAAGAATGAAAGGAACAAAAGATTTTTTTTGGTTTTTTAAAATCCGGAT TCTTCTTTTGACTGAAAAAGTTGCAAGAACAAAAGGTAATAGTTTATCGGTAGGATTCTC TTGTAAATTTGAACTTGCATCTTTCAATCTTAAACAAAAAGCCATAAACAAAACCAAA