Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G05890.2
CDS Infomation	\| RING/U-box superfamily protein \| Chr1:1779631-1784166 FORWARD LENGTH=1785 \| 201606
Sequence	ATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTATGATTATTACAGCGGC GGCACCTATGATGACAACGATAGTGATGAAACTGATTTCGGGTTTGGTGAGGCTGACACC GACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGGTGGCTTCGATTTTAGTGTCTTGT TTTGGGCTGCTTTTGCAGAGATGGCGAATGTTGGAAGCTGTTTTTTGTTTGTTTGTTTGT TTTTTTTTTTTTGGTTTAAGACTTTTGCTTTATTCATGCAATAGTAATTATGTTGTTCTC AAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGAGTTTCCGCGGTCCTC TCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCACTGGAGTGTCAGTAAA GTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACTGTTGGCATATTAGAG GGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGAATATGCTTTGATTCC TACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTTCTGCGCTACATGTTGG ACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTGATGCTAAAATGTCCC GACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAGTTGGCTTCTAAGGAA GACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAAGTCAACAGAGAGATG AAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCTGGTGGGACCGAAAGT TATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGCACTGAAGAGGCTCAC CGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAACAGCGCTGAATCTGAA AATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGTAAGCGGCCAATTGAA AAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAATTTGAGTTTTGTTGG CTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGATTTTATGCCTGCAAC CGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAAAGGAGGCGAGAGATG GCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGGGCAAGCAATCAAGTG TCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGAGAAGCTTGGGAAGCTT AGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCAGAGGCTTGGCTCCAG ATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGATACTATCTACAAGAT CATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAGTCAGGTTTGGAGAGG CTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGCTGAGGGCCCTTCAGAG GAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCATAACAAAAACCTTCTTT GAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGATTCACAAGCTGCTAGC AGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGTGGGAAAGGTAAAGGA AGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATTGA

Peptide Sequence

PEP ID	AT1G05890.2
PEP Infomation	\| RING/U-box superfamily protein \| Chr1:1779631-1784166 FORWARD LENGTH=594 \| 201606
Sequence	MDSDDDMHDMDSVDYDYYSGGTYDDNDSDETDFGFGEADTDDAAIIASYRSKVASILVSC FGLLLQRWRMLEAVFCLFVCFFFFGLRLLLYSCNSNYVVLKEEDIRRHQNDDVGRVSAVL SITDVEASTLLLHYHWSVSKVNDEWFADEERVRRTVGILEGPVVTTPDGREFTCGICFDS YTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDMIDKLASKE DKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCLCSHSFCWNCTEEAH RPVDCDTVGKWILKNSAESENMNWILANSKPCPKCKRPIEKNHGCMHMTCTPPCKFEFCW LCLNAWTEHGERTGGFYACNRYEAAKQEGLYDEAERRREMAKNSLERYTHYYERWASNQV SRQKAMGDLQKMQSEKLGKLSDIQCTPESQLKFIAEAWLQIIECRRVLKWTYAYGYYLQD HAKKPFFEYLQGEAESGLERLHKCVEKDIEVFELAEGPSEEFNHFRTKLTGLTSITKTFF ENLVKALENGLADVDSQAASSKPANSKPSSKTKGGGKGKGSSKNGGSSRNPDGN

Transcript Sequence

Transcript ID	AT1G05890.2
Transcript Infomation	\| RING/U-box superfamily protein \| Chr1:1779256-1784427 FORWARD LENGTH=2421 \| 201606
Sequence	ATTACTTTGTTCTTTTTTTGGGTCCAAACTTTAAATTGATTACACTAATAGTATTAAACT TTTTTTTGTTGGTTACTAAAAATCAATTGAAACCGATAGTGGCAAAAGTCCATATATCTT TCTCTCATCTACTCGATTTCTGAATCGCGAACGCAGCGAGCGATCCGGAATCGAGAGAGA GAGCTACCAATTTTTCCAACTTGTTCGGTTCCTTATAAAGCTGTTTACTTTCCCTTGCGA ATTCTCTCTCTCTCTACTATAAAGCAATACCCTTTTCTTTCTTTTTTGGTAACCCCCAAA CCCTACTTTGTCCAGCGAGAAAGGAAGAGGGGTTTCGTCTGATTCCGCTAAATCTCTAGT CTTTATCTAAAGATCATGGATTCCGATGATGATATGCACGATATGGACTCGGTAGATTAT GATTATTACAGCGGCGGCACCTATGATGACAACGATAGTGATGAAACTGATTTCGGGTTT GGTGAGGCTGACACCGACGATGCCGCCATCATCGCCTCCTATCGCTCTAAGGTGGCTTCG ATTTTAGTGTCTTGTTTTGGGCTGCTTTTGCAGAGATGGCGAATGTTGGAAGCTGTTTTT TGTTTGTTTGTTTGTTTTTTTTTTTTTGGTTTAAGACTTTTGCTTTATTCATGCAATAGT AATTATGTTGTTCTCAAGGAAGAAGATATTCGCAGGCATCAGAACGATGATGTTGGGCGA GTTTCCGCGGTCCTCTCCATAACCGATGTCGAAGCAAGTACTTTGCTTCTTCACTATCAC TGGAGTGTCAGTAAAGTTAATGATGAATGGTTTGCGGATGAGGAGAGAGTTCGCAGAACT GTTGGCATATTAGAGGGACCTGTTGTTACAACACCTGATGGCAGAGAATTTACATGTGGA ATATGCTTTGATTCCTACACTCTTGAGGAAATTGTATCGGTTTCTTGTGGTCATCCTTTC TGCGCTACATGTTGGACAGGTTATATAAGCACAACCATCAATGATGGCCCAGGCTGTTTG ATGCTAAAATGTCCCGACCCTTCTTGTCCTGCTGCTATTGGTCGAGATATGATCGATAAG TTGGCTTCTAAGGAAGACAAGGAGAAGTATTATAGATATTTTCTTAGATCTTATGTCGAA GTCAACAGAGAGATGAAGTGGTGTCCTGCCCCAGGATGTGAACATGCAATTGATTTTGCT GGTGGGACCGAAAGTTATGATGTTTCGTGCTTGTGTTCGCATAGCTTTTGCTGGAATTGC ACTGAAGAGGCTCACCGTCCTGTGGATTGTGACACAGTTGGAAAATGGATACTAAAGAAC AGCGCTGAATCTGAAAATATGAATTGGATACTTGCCAATTCAAAGCCTTGTCCAAAGTGT AAGCGGCCAATTGAAAAGAATCATGGCTGTATGCACATGACATGCACACCACCTTGTAAA TTTGAGTTTTGTTGGCTTTGCCTTAACGCATGGACAGAACACGGGGAAAGAACTGGTGGA TTTTATGCCTGCAACCGGTATGAGGCGGCTAAGCAAGAAGGGTTGTATGATGAGGCTGAA AGGAGGCGAGAGATGGCAAAAAATTCGCTAGAGAGATACACTCATTACTATGAACGCTGG GCAAGCAATCAAGTGTCGAGGCAAAAAGCTATGGGGGATCTGCAGAAAATGCAATCAGAG AAGCTTGGGAAGCTTAGTGACATTCAGTGCACACCAGAATCTCAGCTCAAGTTTATCGCA GAGGCTTGGCTCCAGATCATTGAATGCAGACGGGTACTGAAATGGACATATGCATATGGA TACTATCTACAAGATCATGCTAAGAAACCATTTTTTGAGTATTTGCAAGGGGAGGCTGAG TCAGGTTTGGAGAGGCTCCACAAATGCGTAGAGAAGGATATAGAGGTGTTTGAACTTGCT GAGGGCCCTTCAGAGGAATTCAATCATTTCCGGACAAAATTAACTGGTTTAACCAGCATA ACAAAAACCTTCTTTGAAAATCTGGTGAAAGCTCTGGAGAATGGTCTTGCTGATGTGGAT TCACAAGCTGCTAGCAGCAAACCAGCTAACTCTAAACCTTCTAGCAAGACAAAAGGCGGT GGGAAAGGTAAAGGAAGCTCCAAAAATGGCGGGTCCAGCAGAAACCCAGATGGCAATTGA GATCTCTCAGGTTTCAGTTACATCACTCAGTCTCTCTCACAAAGGTCTAGATTACTCAGG AAGAAGAAAGACTTTTTAAGAGTTCAGCAAATTGGAGAAAGGTTTGGGGTTTAGAATACT TTTGACTACACTCCTGTGAGTTTGAAGGCTGTTAAGGCACAAGACTGCACACACAAGTTA ACTATCTCTCTCTGTCTTAAGGGTTCATGATAGTCTTTGCTTACCCTAAATATTGTATAG TATTAAAGAATCTGCACATTG