Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G05280.1
CDS Infomation	\| ERV-F (C)1 provirus ancestral Env polyprotein%2C putative (DUF604) \| Chr1:1535079-1537414 REVERSE LENGTH=1476 \| 201606
Sequence	ATGTGTCTTCCATTTCGACCCGTCTCGAAAACATATTATTCGTCTTCTTCTTCGACTATC GTGACGCGTATGGTAAACTGCATACTACTTTTTGTATTCATTTTGTTGGTCTACCTCCTC ATCTCGGCCTCAAGACTTCAATCTAAAAACTCTATTCATGCATACTTCTCATCTTCTGAT CAAGATCAATCTCAGAGCCCGACAAAAATCGAGCACATCGTCTTTGGGATAGGCTCAAGC GCGATCTCGTGGCGTGCACGTAGAGAATACGTTAAGCTTTGGTGGGATGCTCAGAAAATG AGAGGCTGCGTCTTTGTTGAGCGTCCCTTGCCGTCTTCTCAAAACCACACAGATTCATAT CTCCTTCCTCCGGTTTGTGTTTCCCAAGATACTTCCCGGTTCAGGTACACTTGGAGAGGC GGTGACAGAAACGCGATCCGAATCGCGCGGTGCGTTCTAGAAACTGTCAGGCTATTCAAC ACCTCCTCAGAAGAAGTAAGATGGTACGTATTTGGAGACGACGACACGATTTTCATTCCT GAAAACCTCGCTCGAACTCTCTCCAAATACGACCACACATCATGGTATTACATAGGATCA ACCTCGGAGATTTATCACCAGAACTCTATGTTCGGACACGACATGGCGTTCGGGGGTGGT GGGTACGCTTTAAGCAGCTCATTGGCTAATGTTTTAGCTAGAAATTTCGATTCTTGTATC GAACGATATCCACATTTGTACGGAGGAGACTCTAGGGTTTATGCTTGTGTGCTTGAGCTT GGGGTTGGATTGTCTAAAGAGCCTGGCTTCCATCAGTTTGATGTGAGAGGAAATGCATTG GGAATATTGACATCACATTCAACGAGACCGTTGGTGTCACTACACCACATGGCTCACATT GACCCAATCTTTCCAAACTCAACCACTTTCTCCGCGGTCCGCCACCTTTTCTCCGCCGTA CAACTCGACCCTCTCCGTATTTTTCAACTATCCGTTTGCTACGACCGTTGGTACTCTTGG ACCATCTCCGTCTCTTGGGGATATACTGTTCAGATTGATGGCAGGCATTTGTTTCTACGG GATGTTTTGCGGGCACAAGAGACGTTCCGACCATGGCAAAAATCAGGCGGATTAGCAAGT GTTTACACATTCAACACAAGAGAGATTCATCGTGATCCTTGCCAACGACCTGTCACTTTC TACATGCAACATGTTTCTTCTAGTAGCCATGATGGAACCATTAAAAGTGTTTATAAGCAA GCTTACGAGAATTGCACCTACGATCCTGTTACATCGCCTCGCAAAATTCATGAGATTAGA GTGTTTTCAAGAAGACTCGATCCCAATATCAGACAATTGAAGGCTCCCAGAAGGCAGTGT TGTGATATATTACCAACTTCTTCAACTGGTGGCAACATAATGGAAATTGGACTGCGAGAG TGCAAAGAGGATGAGCTCATCTATATTCATCCCTAA

Peptide Sequence

PEP ID	AT1G05280.1
PEP Infomation	\| ERV-F (C)1 provirus ancestral Env polyprotein%2C putative (DUF604) \| Chr1:1535079-1537414 REVERSE LENGTH=491 \| 201606
Sequence	MCLPFRPVSKTYYSSSSSTIVTRMVNCILLFVFILLVYLLISASRLQSKNSIHAYFSSSD QDQSQSPTKIEHIVFGIGSSAISWRARREYVKLWWDAQKMRGCVFVERPLPSSQNHTDSY LLPPVCVSQDTSRFRYTWRGGDRNAIRIARCVLETVRLFNTSSEEVRWYVFGDDDTIFIP ENLARTLSKYDHTSWYYIGSTSEIYHQNSMFGHDMAFGGGGYALSSSLANVLARNFDSCI ERYPHLYGGDSRVYACVLELGVGLSKEPGFHQFDVRGNALGILTSHSTRPLVSLHHMAHI DPIFPNSTTFSAVRHLFSAVQLDPLRIFQLSVCYDRWYSWTISVSWGYTVQIDGRHLFLR DVLRAQETFRPWQKSGGLASVYTFNTREIHRDPCQRPVTFYMQHVSSSSHDGTIKSVYKQ AYENCTYDPVTSPRKIHEIRVFSRRLDPNIRQLKAPRRQCCDILPTSSTGGNIMEIGLRE CKEDELIYIHP

Transcript Sequence

Transcript ID	AT1G05280.1
Transcript Infomation	\| ERV-F (C)1 provirus ancestral Env polyprotein%2C putative (DUF604) \| Chr1:1534830-1537602 REVERSE LENGTH=1913 \| 201606
Sequence	GTCAGCATTAATTCCTTACACTAAAACCATTTTTAACATGACTCCATTGCTCTCCCTCTG ATCAACCCTCCTCCTCCGCCGCTGCTACAAACACTTTAATATATATTGCCACCGTCCTAC CATATATATATAGTCCACTTAAGATCTTTCCACTCATTTATAACCCAAATTTGTTCTGTT TCATAAATATGTGTCTTCCATTTCGACCCGTCTCGAAAACATATTATTCGTCTTCTTCTT CGACTATCGTGACGCGTATGGTAAACTGCATACTACTTTTTGTATTCATTTTGTTGGTCT ACCTCCTCATCTCGGCCTCAAGACTTCAATCTAAAAACTCTATTCATGCATACTTCTCAT CTTCTGATCAAGATCAATCTCAGAGCCCGACAAAAATCGAGCACATCGTCTTTGGGATAG GCTCAAGCGCGATCTCGTGGCGTGCACGTAGAGAATACGTTAAGCTTTGGTGGGATGCTC AGAAAATGAGAGGCTGCGTCTTTGTTGAGCGTCCCTTGCCGTCTTCTCAAAACCACACAG ATTCATATCTCCTTCCTCCGGTTTGTGTTTCCCAAGATACTTCCCGGTTCAGGTACACTT GGAGAGGCGGTGACAGAAACGCGATCCGAATCGCGCGGTGCGTTCTAGAAACTGTCAGGC TATTCAACACCTCCTCAGAAGAAGTAAGATGGTACGTATTTGGAGACGACGACACGATTT TCATTCCTGAAAACCTCGCTCGAACTCTCTCCAAATACGACCACACATCATGGTATTACA TAGGATCAACCTCGGAGATTTATCACCAGAACTCTATGTTCGGACACGACATGGCGTTCG GGGGTGGTGGGTACGCTTTAAGCAGCTCATTGGCTAATGTTTTAGCTAGAAATTTCGATT CTTGTATCGAACGATATCCACATTTGTACGGAGGAGACTCTAGGGTTTATGCTTGTGTGC TTGAGCTTGGGGTTGGATTGTCTAAAGAGCCTGGCTTCCATCAGTTTGATGTGAGAGGAA ATGCATTGGGAATATTGACATCACATTCAACGAGACCGTTGGTGTCACTACACCACATGG CTCACATTGACCCAATCTTTCCAAACTCAACCACTTTCTCCGCGGTCCGCCACCTTTTCT CCGCCGTACAACTCGACCCTCTCCGTATTTTTCAACTATCCGTTTGCTACGACCGTTGGT ACTCTTGGACCATCTCCGTCTCTTGGGGATATACTGTTCAGATTGATGGCAGGCATTTGT TTCTACGGGATGTTTTGCGGGCACAAGAGACGTTCCGACCATGGCAAAAATCAGGCGGAT TAGCAAGTGTTTACACATTCAACACAAGAGAGATTCATCGTGATCCTTGCCAACGACCTG TCACTTTCTACATGCAACATGTTTCTTCTAGTAGCCATGATGGAACCATTAAAAGTGTTT ATAAGCAAGCTTACGAGAATTGCACCTACGATCCTGTTACATCGCCTCGCAAAATTCATG AGATTAGAGTGTTTTCAAGAAGACTCGATCCCAATATCAGACAATTGAAGGCTCCCAGAA GGCAGTGTTGTGATATATTACCAACTTCTTCAACTGGTGGCAACATAATGGAAATTGGAC TGCGAGAGTGCAAAGAGGATGAGCTCATCTATATTCATCCCTAATTTCACCGTAACTAAT TATATTATACCTTTACAATATTGCCATCCATTAATTTTGAACCTAAAAATAGTTTTTTTT TCTTTCCTTTTTGTAAATTTAACATTAAGTTGTTAATTGGCTGGTTGCCTTTCAACATTT GGAGCATTTGAGATTACTTTGTGACAAAAAACTGAACATGACATGAATATAATCTAGGGT GGACCTTCACTGAAATTGATGAAAATGACATTATACTTAAAATTAGGCTACCT