Gene sequences

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SNP Detection
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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G04945.3
CDS Infomation	\| HIT-type Zinc finger family protein \| Chr1:1399588-1402651 FORWARD LENGTH=1935 \| 201606
Sequence	ATGATAACTGGATACAGCACGCCAAGTGCACATGTTCTAATGAGCTCTCGGGCATTCAAG TCATCATCATATAGAGCTGCAGCAGGACAGACTCAACATTATCTTGCTCGAAGTTCATTG CCTGTCGTAAAGAACTCGTGGGGATCACCACCTTCACCTTTCAATGAGCTTCCGAGAGTG TCAAGAGGTGTGCCTCTGTCATATCTCTCAGCCTCGTCTTCTCTGCTTCTGAATGGAGAA CAAGGTAGTCTATCTGGTACATTACCTGTGTTACCTGTCCGCAGAAAAACTCTTTTGACT CCACGAGCGTCAAAAGATGTACCTTCTAGCTTCCGATTTCCCCCGATGACCAAGAAGCCA CAATGGTGGTGGAGAACTTTGGCTTGCCTGCCTTACCTAATGCCACTGCATGAAACTTGG ATGTATGCAGAAACCGCTTACCATCTCCACCCATTCCTAGAAGATTTTGAATTCTTAACC TACCCATTTCTAGGCGCCATAGGAAGATTACCAAGCTGGTTCCTCATGGCTTACTTTTTT GTAGCTTATCTAGGGATAGTGCGAAGAAAAGAATGGCCTCACTTCTTCAGGTTCCATGTA GTGATGGGTATGCTGCTTGAAATCGCACTCCAGGTTATAGGGACCGTTAGCAAGTGGATG CCTCTTGGAGTCTATTGGGGTAAGTTTGGGATGCATTTCTGGACTGCTGTTGCGTTTGCT TATCTGTTTACCGTCCTTGAAAGCATACGGTGTGCACTTGCGGATTCGGTCTGCGAAGAG TGCAAACAAAATCCATGGAAGTACAAATGTCCCGGATGTTCAATTCGATCGTGTGCCCTT CCCTGTGTGAAAGCCCACAAGCAGCGAACAGGTTGTACCGGAAAAAGGAAGTTCACCGAC GTCGTTCCCCTCTCCAAGTTCGACGACAATCTCCTCCTCTCTGACTACAATATGCTTGAG GAAACAAAAAGAGTAGCCGAGTCTGCTCTGAGAAGGAGAAGTCAATTATGCAAAAATCAT TATTCTTATAAGTTACCCTATCTTCTTAAGAGCCTTCAAAGTGCTGCTTATAGCCGCAGA ACTAAGCTATGGTATCTCCCTAGTGGAATGTTAAAGAGGGAAAATAATCAGTCCAGATAC GATAATAGGAGCAAGTGTATCTCGTGGACAATAGAGTGGCGGTTTCACTCTACAGATGTC ATTCTTGTTGACCATGGAGTTGGTGAAGATAGAAACCTATGCTCAGTGATAAAGAATCAT CTCAAGCCTGGCCCCTGGATTCACAAGCTCAAGCCTTTTTGTGATGTGGATCTTGATTCT CTCAAACTTTTTATACGCCAATACCCAAAGGGTGCAAAGGCTCCTTTCAAGGAGCTGGAC ATCAAAGCTCCTTTGAGGAAACAGCTTGCCAAAGTTGTTATATTAGAGTACCCGGTGATC CATGTATATCTACCTTCACAGAGCTATGAATTTAAAGTTATCAAAGACTTTAACACGACA CCTAATCCTAATGATTCGTTATACGATGGTCATGGATGCACAAATGGTATAACCTTCCGA GAAGAAGAAATAGAAGAAGACGACATTGACTCCTTTGAGCCAGAGGTTCTTGGTCTTATG AAACAAATGAACTATAACCCGTGTCTGCGAGTCTCAGAGAAAAGCAAGGCAGAGGGCGTT GGTACCAACAACTCAAATCCTCAGGTTGATACCACAGAACAAGAAGATGCCGGTAACATG GAGCTTGAATTTGAGCAAGGGTTAATAGACACATACTCAGATCTTTTTGCGGAGATGAAC CCAGGTGACTATTTCAACTTTGAATGTGAATTTGCAAAGGGGTTGGATTCGGATGATAAT TGCAATCTCCAAAATTTAGATACTGATTTCATCGCTGATGGACTAGATTTAGAAGAAGGG GAAATCGTCGAATGA

Peptide Sequence

PEP ID	AT1G04945.3
PEP Infomation	\| HIT-type Zinc finger family protein \| Chr1:1399588-1402651 FORWARD LENGTH=644 \| 201606
Sequence	MITGYSTPSAHVLMSSRAFKSSSYRAAAGQTQHYLARSSLPVVKNSWGSPPSPFNELPRV SRGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKP QWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFF VAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFA YLFTVLESIRCALADSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTD VVPLSKFDDNLLLSDYNMLEETKRVAESALRRRSQLCKNHYSYKLPYLLKSLQSAAYSRR TKLWYLPSGMLKRENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNH LKPGPWIHKLKPFCDVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVI HVYLPSQSYEFKVIKDFNTTPNPNDSLYDGHGCTNGITFREEEIEEDDIDSFEPEVLGLM KQMNYNPCLRVSEKSKAEGVGTNNSNPQVDTTEQEDAGNMELEFEQGLIDTYSDLFAEMN PGDYFNFECEFAKGLDSDDNCNLQNLDTDFIADGLDLEEGEIVE

Transcript Sequence

Transcript ID	AT1G04945.3
Transcript Infomation	\| HIT-type Zinc finger family protein \| Chr1:1399174-1403038 FORWARD LENGTH=2532 \| 201606
Sequence	GAGAGAAAGAGAGAGTAATCGCCATTTTTCTTTATTGGGGGAGTGAAGAAGGATAGGATT CAGATGATGAAGTACAGATGAATGCTCCATAAACCCTACTCTTCTTCTTTTACCTCCAGC TTCGATTATACCATTCCTTGTTTGTGAAGGTTTGCAATGTTCTAGCTGGTCTTGAGCAAT CTCTGGTTTAGGGCATTTTAGTTGGTAAGGATGATAACTGGATACAGCACGCCAAGTGCA CATGTTCTAATGAGCTCTCGGGCATTCAAGTCATCATCATATAGAGCTGCAGCAGGACAG ACTCAACATTATCTTGCTCGAAGTTCATTGCCTGTCGTAAAGAACTCGTGGGGATCACCA CCTTCACCTTTCAATGAGCTTCCGAGAGTGTCAAGAGGTGTGCCTCTGTCATATCTCTCA GCCTCGTCTTCTCTGCTTCTGAATGGAGAACAAGGTAGTCTATCTGGTACATTACCTGTG TTACCTGTCCGCAGAAAAACTCTTTTGACTCCACGAGCGTCAAAAGATGTACCTTCTAGC TTCCGATTTCCCCCGATGACCAAGAAGCCACAATGGTGGTGGAGAACTTTGGCTTGCCTG CCTTACCTAATGCCACTGCATGAAACTTGGATGTATGCAGAAACCGCTTACCATCTCCAC CCATTCCTAGAAGATTTTGAATTCTTAACCTACCCATTTCTAGGCGCCATAGGAAGATTA CCAAGCTGGTTCCTCATGGCTTACTTTTTTGTAGCTTATCTAGGGATAGTGCGAAGAAAA GAATGGCCTCACTTCTTCAGGTTCCATGTAGTGATGGGTATGCTGCTTGAAATCGCACTC CAGGTTATAGGGACCGTTAGCAAGTGGATGCCTCTTGGAGTCTATTGGGGTAAGTTTGGG ATGCATTTCTGGACTGCTGTTGCGTTTGCTTATCTGTTTACCGTCCTTGAAAGCATACGG TGTGCACTTGCGGATTCGGTCTGCGAAGAGTGCAAACAAAATCCATGGAAGTACAAATGT CCCGGATGTTCAATTCGATCGTGTGCCCTTCCCTGTGTGAAAGCCCACAAGCAGCGAACA GGTTGTACCGGAAAAAGGAAGTTCACCGACGTCGTTCCCCTCTCCAAGTTCGACGACAAT CTCCTCCTCTCTGACTACAATATGCTTGAGGAAACAAAAAGAGTAGCCGAGTCTGCTCTG AGAAGGAGAAGTCAATTATGCAAAAATCATTATTCTTATAAGTTACCCTATCTTCTTAAG AGCCTTCAAAGTGCTGCTTATAGCCGCAGAACTAAGCTATGGTATCTCCCTAGTGGAATG TTAAAGAGGGAAAATAATCAGTCCAGATACGATAATAGGAGCAAGTGTATCTCGTGGACA ATAGAGTGGCGGTTTCACTCTACAGATGTCATTCTTGTTGACCATGGAGTTGGTGAAGAT AGAAACCTATGCTCAGTGATAAAGAATCATCTCAAGCCTGGCCCCTGGATTCACAAGCTC AAGCCTTTTTGTGATGTGGATCTTGATTCTCTCAAACTTTTTATACGCCAATACCCAAAG GGTGCAAAGGCTCCTTTCAAGGAGCTGGACATCAAAGCTCCTTTGAGGAAACAGCTTGCC AAAGTTGTTATATTAGAGTACCCGGTGATCCATGTATATCTACCTTCACAGAGCTATGAA TTTAAAGTTATCAAAGACTTTAACACGACACCTAATCCTAATGATTCGTTATACGATGGT CATGGATGCACAAATGGTATAACCTTCCGAGAAGAAGAAATAGAAGAAGACGACATTGAC TCCTTTGAGCCAGAGGTTCTTGGTCTTATGAAACAAATGAACTATAACCCGTGTCTGCGA GTCTCAGAGAAAAGCAAGGCAGAGGGCGTTGGTACCAACAACTCAAATCCTCAGGTTGAT ACCACAGAACAAGAAGATGCCGGTAACATGGAGCTTGAATTTGAGCAAGGGTTAATAGAC ACATACTCAGATCTTTTTGCGGAGATGAACCCAGGTGACTATTTCAACTTTGAATGTGAA TTTGCAAAGGGGTTGGATTCGGATGATAATTGCAATCTCCAAAATTTAGATACTGATTTC ATCGCTGATGGACTAGATTTAGAAGAAGGGGAAATCGTCGAATGATGGTCATAGTCTTGT TCTGGCAAAAAGGAATTACTCTCTGTGAAACATTTTTGAGGATTATGTTCATGCCTGAAG CTCTCTTGTTCGAGCACATTAGCTATACTTGGTAATAGCCAAAGCTTTTACTGGAATGCA ATAAGCCACAGCACTGATGGTCATAAGTTTTCGGTCTGGGCTTTGATCAACAGGTATTTC TTTTGTAGTAAACCAGATTACTAGGCTGTTCTGTGGTTTGTAGCAAACTTGATTGTTTAC ATACAAGATAGTTAACTTAAGAATGTCTCCGAAACTTTTGTTCAGTCTTATCCTCCTATA GATCCTCATAAATTAATCTTGTTGTCTTTCAGATCTTCTTTATAGTCAATGTAATACAGA CCAAACCTTGTA