Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G04810.1
CDS Infomation	\| 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit \| Chr1:1350304-1355261 FORWARD LENGTH=3006 \| 201606
Sequence	ATGGCCGCCGCCATGGTTAGTTCCGCCGGTGGGTTACTGGCAATGCTCAACGAACCCCAT CCTTCCTTGAAACTTCACGCTCTCTCATATCTCATCAGATTGGTTGACCAATTTTGGCCC GAGATCTCCACTAGTGTCCCAATCATAGAGAGCTTATACGAAGATGAAGAGTTTGATCAG CATCAAAGACAGCTTGCTGCCTTGTTGGCCTCCAAGGTTTTCTATTACTTGGGTGAGCTT AACGATTCCTTGTCCTATGCCCTTGGAGCTGGATCCTTGTTTGATGTGTCAGAGGATTCT GATTATATTCATACTCTTCTATCCAAAGCAATAGATGAGTATGCTATTCTCAGATCAAAG GCAGTCGAGTCAAGTGAGGTGGTGGAAATTGACCCGAGATTGGTGGCCATTGTTGAACGA ATGCTAGACAAATGTATCACTGACGGAAAGTATCAACAAGCCATGGGCATTGCTATAGAA TGCCGGAGATTGGATAAGTTGGAGGAAGCGATCATAAAGAGTGAGAATGTGCAGGGAACA TTATCTTACTGCATCAATGTTTCCCACTCTTTTGTTAATCAAAGAGAATATAGACATGAG GTTCTTCGGTTACTTGTTAATGTTTACCAGAAGCTGGCTTCTCCTGATTATTTGAGCATT TGCCAATGCCTTATGTTCTTGGATGAACCACAAGGCGTTGCAAGCATATTGGAGAAGCTT CTTCGTTCAGAGAACAAAGATGATGCTTTATTGGCTTTCCAAATCTCTTTCGATCTTGTA CAGAATGAGCACCAGGCATTCCTCATGAGTGTTAGAGATCGCCTTCCAGCGCCCAAGACC CGTCCTGTAGAAGCAATTCAAGCTGTTGAAACCTCTACTGCTCAGAATGAGAACACTGCA GGGGATGTTCAGATGGCGGATGAAACTCCATCTCAGACAATTGTGCATGAAACAGATCCT GTTGACGCTGTGTACGCTGAGAGGTTAACAAAGGCTAAGGGGATTTTATCTGGAGAGACA TCAATACAACTGACACTCCAGTTTCTTTACAGCCATAACAAATCGGACCTGCTGATCCTG AAGACAATCAAACAATCTGTTGAGATGCGGAACAGTGTATGTCACAGTGCTACAATTTAT GCTAATGCTATAATGCATGCTGGAACGACAGTTGACACTTTTCTCAGGGAGAATTTGGAT TGGCTAAGCAGGGCCACCAATTGGGCCAAGTTTAGTGCTACAGCAGGATTAGGTGTTATT CATAGGGGTCACTTGCAACAGGGCAGGTCACTGATGGCCCCATACTTGCCTCAGGGCGGA GCAGGTGGTGGCGGGAGTCCTTATTCCGAAGGGGGTGCTTTATATGCTCTCGGCCTTATT CATGCAAACCATGGTGAGGGAATCAAGCAATTTCTTCGTGATAGTCTACGCAGCACTAGT GTTGAGGTTATTCAACACGGAGCTTGTTTAGGTCTTGGTTTGGCTGCTCTTGGGACAGCT GATGAAGACATATATGATGATATCAAAAGTGTGCTTTACACTGACAGTGCTGTTGCTGGT GAAGCTGCCGGCATAAGCATGGGTCTATTGTTGGTTGGAACAGCAACTGATAAGGCAAGT GAGATGCTCGCTTATGCTCACGAGACTCAGCATGAGAAGATAATAAGGGGATTGGCTCTA GGAATAGCTCTCACAGTATATGGAAGAGAAGAGGGAGCAGATACTTTGATTGAGCAGATG ACTAGAGATCAGGATCCTATCATCCGTTATGGTGGAATGTATGCACTCGCATTGGCTTAC AGTGGAACTGCAAACAACAAAGCCATCCGCCAACTTCTTCACTTTGCTGTGTCTGATGTC AGTGACGATGTTAGGAGGACTGCTGTTCTTGCACTTGGATTTGTCTTATACTCTGATCCA GAGCAGACTCCCCGTATTGTATCCCTTCTTTCCGAGTCGTACAATCCACATGTCCGCTAT GGCGCAGCTCTTGCAGTTGGCATCTCTTGTGCAGGCACTGGTCTGAGTGAGGCGATATCT TTGTTGGAGCCACTTACATCAGATGTTGTAGACTTTGTTCGTCAAGGTGCTCTGATTGCC ATGGCCATGGTGATGGTCCAAATTAGTGAAGCAAGCGATTCTCGCGTTGGAGCATTTAGG CGTCAACTTGAGAAGATAATACTTGACAAGCATGAAGATACAATGAGCAAGATGGGAGCA ATTTTGGCTTCAGGTATTCTTGATGCTGGTGGAAGGAATGTGACGATAAGACTGCTGTCT AAGACAAAACATGACAAAGTCACTGCAGTCATTGGCCTTACTGTCTTCAGCCAGTTTTGG TATTGGTACCCATTGATTTACTTCATAAGCTTGGCGTTTTCACCCACCGCCTTCATCGGT TTGAACTACGATCTCAAAGTCCCAAAGTTTGAATTCATGTCACACGCAAAACCATCGTTG TTTGAGTATCCAAAACCAACTACGGTTGCTACTGCCAACACCGCTGCCAAATTACCAACT GCTGTGCTCTCAACCTCAGCCAAAGCCAAAGCTAAGGCTAAGAAAGAAGCAGAGCAGAAA GCTAAAGCTGAAAACTCTGGCAATGAAGCTGGAAAAGCCAATGCAGCGTCAGATGAGAAG GAAGCAGAGTCTATGCAGGTTGATAGCACAGCTACAACGGTGGAGAAGAAGGTTGAGCCA GAAGCAACGTTTGAGATTCTAGTCAATCCTGCGCGTGTAGTCCCTTCACAGGAGAAATAC ATCAAATTGATGGAGGATAGCCGATATGTACCGATGAAGCTAGCTCCATCAGGGTTTGTC CTTCTCAGAGACTTGCGTCCGCATGAGCCTGAAGTTCTGTCTCTGACCGATGCACCGACT TCAACAGCATCCCCTGCAGTGGGTGCAGAAGCTGCAGGACAAGCCCAACAAGCAGCCACC ACCTCTGCTATGGCCATAGATGACGAGCCACAACCTCCGCAGGCCTTTGAATACGCTTCT CCATGA

Peptide Sequence

PEP ID	AT1G04810.1
PEP Infomation	\| 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit \| Chr1:1350304-1355261 FORWARD LENGTH=1001 \| 201606
Sequence	MAAAMVSSAGGLLAMLNEPHPSLKLHALSYLIRLVDQFWPEISTSVPIIESLYEDEEFDQ HQRQLAALLASKVFYYLGELNDSLSYALGAGSLFDVSEDSDYIHTLLSKAIDEYAILRSK AVESSEVVEIDPRLVAIVERMLDKCITDGKYQQAMGIAIECRRLDKLEEAIIKSENVQGT LSYCINVSHSFVNQREYRHEVLRLLVNVYQKLASPDYLSICQCLMFLDEPQGVASILEKL LRSENKDDALLAFQISFDLVQNEHQAFLMSVRDRLPAPKTRPVEAIQAVETSTAQNENTA GDVQMADETPSQTIVHETDPVDAVYAERLTKAKGILSGETSIQLTLQFLYSHNKSDLLIL KTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRENLDWLSRATNWAKFSATAGLGVI HRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQFLRDSLRSTS VEVIQHGACLGLGLAALGTADEDIYDDIKSVLYTDSAVAGEAAGISMGLLLVGTATDKAS EMLAYAHETQHEKIIRGLALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALALAY SGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSDPEQTPRIVSLLSESYNPHVRY GAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMVQISEASDSRVGAFR RQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKVTAVIGLTVFSQFW YWYPLIYFISLAFSPTAFIGLNYDLKVPKFEFMSHAKPSLFEYPKPTTVATANTAAKLPT AVLSTSAKAKAKAKKEAEQKAKAENSGNEAGKANAASDEKEAESMQVDSTATTVEKKVEP EATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAPSGFVLLRDLRPHEPEVLSLTDAPT STASPAVGAEAAGQAQQAATTSAMAIDDEPQPPQAFEYASP

Transcript Sequence

Transcript ID	AT1G04810.1
Transcript Infomation	\| 26S proteasome regulatory complex%2C non-ATPase subcomplex%2C Rpn2/Psmd1 subunit \| Chr1:1350080-1355466 FORWARD LENGTH=3435 \| 201606
Sequence	TGAAAGTGTAATCTTATTAAACATTTAGGGGTATTGGTAAAAATTACTTGACTTGTTGGG TAAGTATCTTAATATTCGATAAGTCTAGAATTTCGATTTTGATTAGACTTGTGAAAAAGT GAACTCAGAAATTGTGCTCGCCCAAAGTAGTTCGGTTCTTGTGTTCCTCCGTCTGATCAA CTCTTCTTCTCCACCTCTAGGTTTCTAATTTTCCGATTAGGATAATGGCCGCCGCCATGG TTAGTTCCGCCGGTGGGTTACTGGCAATGCTCAACGAACCCCATCCTTCCTTGAAACTTC ACGCTCTCTCATATCTCATCAGATTGGTTGACCAATTTTGGCCCGAGATCTCCACTAGTG TCCCAATCATAGAGAGCTTATACGAAGATGAAGAGTTTGATCAGCATCAAAGACAGCTTG CTGCCTTGTTGGCCTCCAAGGTTTTCTATTACTTGGGTGAGCTTAACGATTCCTTGTCCT ATGCCCTTGGAGCTGGATCCTTGTTTGATGTGTCAGAGGATTCTGATTATATTCATACTC TTCTATCCAAAGCAATAGATGAGTATGCTATTCTCAGATCAAAGGCAGTCGAGTCAAGTG AGGTGGTGGAAATTGACCCGAGATTGGTGGCCATTGTTGAACGAATGCTAGACAAATGTA TCACTGACGGAAAGTATCAACAAGCCATGGGCATTGCTATAGAATGCCGGAGATTGGATA AGTTGGAGGAAGCGATCATAAAGAGTGAGAATGTGCAGGGAACATTATCTTACTGCATCA ATGTTTCCCACTCTTTTGTTAATCAAAGAGAATATAGACATGAGGTTCTTCGGTTACTTG TTAATGTTTACCAGAAGCTGGCTTCTCCTGATTATTTGAGCATTTGCCAATGCCTTATGT TCTTGGATGAACCACAAGGCGTTGCAAGCATATTGGAGAAGCTTCTTCGTTCAGAGAACA AAGATGATGCTTTATTGGCTTTCCAAATCTCTTTCGATCTTGTACAGAATGAGCACCAGG CATTCCTCATGAGTGTTAGAGATCGCCTTCCAGCGCCCAAGACCCGTCCTGTAGAAGCAA TTCAAGCTGTTGAAACCTCTACTGCTCAGAATGAGAACACTGCAGGGGATGTTCAGATGG CGGATGAAACTCCATCTCAGACAATTGTGCATGAAACAGATCCTGTTGACGCTGTGTACG CTGAGAGGTTAACAAAGGCTAAGGGGATTTTATCTGGAGAGACATCAATACAACTGACAC TCCAGTTTCTTTACAGCCATAACAAATCGGACCTGCTGATCCTGAAGACAATCAAACAAT CTGTTGAGATGCGGAACAGTGTATGTCACAGTGCTACAATTTATGCTAATGCTATAATGC ATGCTGGAACGACAGTTGACACTTTTCTCAGGGAGAATTTGGATTGGCTAAGCAGGGCCA CCAATTGGGCCAAGTTTAGTGCTACAGCAGGATTAGGTGTTATTCATAGGGGTCACTTGC AACAGGGCAGGTCACTGATGGCCCCATACTTGCCTCAGGGCGGAGCAGGTGGTGGCGGGA GTCCTTATTCCGAAGGGGGTGCTTTATATGCTCTCGGCCTTATTCATGCAAACCATGGTG AGGGAATCAAGCAATTTCTTCGTGATAGTCTACGCAGCACTAGTGTTGAGGTTATTCAAC ACGGAGCTTGTTTAGGTCTTGGTTTGGCTGCTCTTGGGACAGCTGATGAAGACATATATG ATGATATCAAAAGTGTGCTTTACACTGACAGTGCTGTTGCTGGTGAAGCTGCCGGCATAA GCATGGGTCTATTGTTGGTTGGAACAGCAACTGATAAGGCAAGTGAGATGCTCGCTTATG CTCACGAGACTCAGCATGAGAAGATAATAAGGGGATTGGCTCTAGGAATAGCTCTCACAG TATATGGAAGAGAAGAGGGAGCAGATACTTTGATTGAGCAGATGACTAGAGATCAGGATC CTATCATCCGTTATGGTGGAATGTATGCACTCGCATTGGCTTACAGTGGAACTGCAAACA ACAAAGCCATCCGCCAACTTCTTCACTTTGCTGTGTCTGATGTCAGTGACGATGTTAGGA GGACTGCTGTTCTTGCACTTGGATTTGTCTTATACTCTGATCCAGAGCAGACTCCCCGTA TTGTATCCCTTCTTTCCGAGTCGTACAATCCACATGTCCGCTATGGCGCAGCTCTTGCAG TTGGCATCTCTTGTGCAGGCACTGGTCTGAGTGAGGCGATATCTTTGTTGGAGCCACTTA CATCAGATGTTGTAGACTTTGTTCGTCAAGGTGCTCTGATTGCCATGGCCATGGTGATGG TCCAAATTAGTGAAGCAAGCGATTCTCGCGTTGGAGCATTTAGGCGTCAACTTGAGAAGA TAATACTTGACAAGCATGAAGATACAATGAGCAAGATGGGAGCAATTTTGGCTTCAGGTA TTCTTGATGCTGGTGGAAGGAATGTGACGATAAGACTGCTGTCTAAGACAAAACATGACA AAGTCACTGCAGTCATTGGCCTTACTGTCTTCAGCCAGTTTTGGTATTGGTACCCATTGA TTTACTTCATAAGCTTGGCGTTTTCACCCACCGCCTTCATCGGTTTGAACTACGATCTCA AAGTCCCAAAGTTTGAATTCATGTCACACGCAAAACCATCGTTGTTTGAGTATCCAAAAC CAACTACGGTTGCTACTGCCAACACCGCTGCCAAATTACCAACTGCTGTGCTCTCAACCT CAGCCAAAGCCAAAGCTAAGGCTAAGAAAGAAGCAGAGCAGAAAGCTAAAGCTGAAAACT CTGGCAATGAAGCTGGAAAAGCCAATGCAGCGTCAGATGAGAAGGAAGCAGAGTCTATGC AGGTTGATAGCACAGCTACAACGGTGGAGAAGAAGGTTGAGCCAGAAGCAACGTTTGAGA TTCTAGTCAATCCTGCGCGTGTAGTCCCTTCACAGGAGAAATACATCAAATTGATGGAGG ATAGCCGATATGTACCGATGAAGCTAGCTCCATCAGGGTTTGTCCTTCTCAGAGACTTGC GTCCGCATGAGCCTGAAGTTCTGTCTCTGACCGATGCACCGACTTCAACAGCATCCCCTG CAGTGGGTGCAGAAGCTGCAGGACAAGCCCAACAAGCAGCCACCACCTCTGCTATGGCCA TAGATGACGAGCCACAACCTCCGCAGGCCTTTGAATACGCTTCTCCATGATTTTGTAATT TGATCAGTTGCCATTTTGTTTTCTGTTAATTAAACAGAGAAACAGTTCTCCTTTTTTGAA CTTGGAGACTAGTACTTATTGCATTGGTTCCGACTTGTTCTTGTGTTAGTAGTTTCTTTA AATCTATATATTACTAAGAGCAGAAATGGTAAACAACTATCATTTTTCCCTAAGTAAAGA TTAATGCTATATACC