Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G04090.1
CDS Infomation	\| vacuolar sorting-associated protein (DUF946) \| Chr1:1057225-1059247 FORWARD LENGTH=1719 \| 201606
Sequence	ATGTTGGGTTACAAATGTCTCCACTGGAACAATCTTATAGATTTACCGCCATTAAAGGAC CCTGAAACCTTCTCTCTTCCTTCTTCCATTCCCCATTGGCCTCCAGGTCAAGGCTTTGGC TCTGGAACAATCAATCTCGGCAAATTACAAGTCATCAAAATCACGGATTTTGAATTTATA TGGAGATACAGATCCACAGAGAAGAAGAAGAACATTTCATTTTACAAACCAAAGGGATTG TTACCTAAAGACTTCCATTGCTTAGGTCACTACTGTCAGTCTGATTCTCATCCTTTGAGA GGTTATGTACTTGCGGCAAGAGATTTAGTGGATTCATTAGAACAGGTAGAGAAACCTGCA TTAGTGGAACCTGTTGATTTTACTCTTGTCTGGAGCTCAAATGATTCAGCAGAAAATGAA TGTAGTAGTAAGAGCGAATGCGGTTACTTCTGGTTACCGCAGCCTCCTGAAGGGTATAGA TCGATCGGTTTTGTGGTTACAAAGACTTCCGTGAAACCTGAGTTGAATGAAGTTAGATGT GTTAGAGCTGATCTTACTGATATATGTGAACCCCACAATGTCATTGTCACTGCTGTTTCA GAATCTTTAGGTGTTCCTTTGTTTATATGGAGAACTCGGCCTTCAGACCGAGGAATGTGG GGCAAAGGTGTCTCTGCAGGTACTTTCTTCTGCAGAACTCGGCTTGTTGCTGCTAGAGAA GATCTTGGTATCGGTATTGCTTGTCTAAAGAATCTAGATTTGAGTTTACATGCGATGCCA AATGTTGATCAGATTCAAGCTTTGATTCAACACTATGGTCCTACACTAGTCTTCCATCCT GGTGAAACTTACTTACCTTCTTCTGTTTCGTGGTTCTTCAAAAATGGTGCAGTTCTCTGC GAAAAGGGAAATCCAATCGAGGAACCTATCGATGAAAATGGTTCGAATTTGCCTCAAGGA GGAAGCAATGACAAGCAGTTTTGGATTGATTTGCCGTGTGATGATCAACAAAGAGATTTC GTCAAGCGAGGAAACCTTGAAAGCTCGAAACTTTACATTCATATTAAGCCTGCTCTTGGA GGAACGTTCACGGATCTTGTCTTCTGGATCTTCTGTCCATTTAACGGACCAGCAACCTTA AAACTAGGACTCGTCGATATCTCATTGATCAGTATTGGCCAACACGTCTGCGATTGGGAA CATTTCACTCTCCGAATCAGCAATTTCTCTGGTGAGCTTTACTCAATCTACTTGTCTCAA CACAGTGGCGGCGAGTGGATCGAAGCATACGACCTTGAAATCATTCCCGGAAGCAACAAA GCCGTTGTTTACTCTTCAAAACATGGTCACGCAAGCTTTCCTAGGGCTGGGACTTACTTA CAGGGATCGACAATGCTTGGGATTGGGATAAGAAATGACACTGCGCGTAGTGAACTCTTG GTAGATTCGAGCTCACGGTACGAGATCATTGCAGCGGAGTATCTCAGCGGAAACAGTGTG TTGGCAGAACCGCCGTGGTTGCAGTACATGAGAGAATGGGGACCAAAGGTTGTGTACGAT TCAAGAGAGGAGATAGAGAGATTGGTGAATCGATTTCCGAGGACGGTTAGGGTTTCGCTT GCCACAGTGCTTAGAAAACTTCCGGTGGAATTATCCGGCGAGGAAGGTCCTACAGGACCA AAGGAGAAGAACAATTGGTATGGCGATGAAAGATGTTGA

Peptide Sequence

PEP ID	AT1G04090.1
PEP Infomation	\| vacuolar sorting-associated protein (DUF946) \| Chr1:1057225-1059247 FORWARD LENGTH=572 \| 201606
Sequence	MLGYKCLHWNNLIDLPPLKDPETFSLPSSIPHWPPGQGFGSGTINLGKLQVIKITDFEFI WRYRSTEKKKNISFYKPKGLLPKDFHCLGHYCQSDSHPLRGYVLAARDLVDSLEQVEKPA LVEPVDFTLVWSSNDSAENECSSKSECGYFWLPQPPEGYRSIGFVVTKTSVKPELNEVRC VRADLTDICEPHNVIVTAVSESLGVPLFIWRTRPSDRGMWGKGVSAGTFFCRTRLVAARE DLGIGIACLKNLDLSLHAMPNVDQIQALIQHYGPTLVFHPGETYLPSSVSWFFKNGAVLC EKGNPIEEPIDENGSNLPQGGSNDKQFWIDLPCDDQQRDFVKRGNLESSKLYIHIKPALG GTFTDLVFWIFCPFNGPATLKLGLVDISLISIGQHVCDWEHFTLRISNFSGELYSIYLSQ HSGGEWIEAYDLEIIPGSNKAVVYSSKHGHASFPRAGTYLQGSTMLGIGIRNDTARSELL VDSSSRYEIIAAEYLSGNSVLAEPPWLQYMREWGPKVVYDSREEIERLVNRFPRTVRVSL ATVLRKLPVELSGEEGPTGPKEKNNWYGDERC

Transcript Sequence

Transcript ID	AT1G04090.1
Transcript Infomation	\| vacuolar sorting-associated protein (DUF946) \| Chr1:1057041-1059454 FORWARD LENGTH=2110 \| 201606
Sequence	TCCCCAAGGTATTCGCTGATGTGTGGAATTGGATAAAACAGTTTCATGACTTTTTGGTTT TCTCAATAAGAGGAAAATCTTTAATTTATTGCCCGAAGGAAATGGTAAACAAGTGATGAG ATGCTACAAAGCTGACATATTTCCACCTTCCTGATTAATTAGGGTTTCGCGCGATCAGAT AAGAATGTTGGGTTACAAATGTCTCCACTGGAACAATCTTATAGATTTACCGCCATTAAA GGACCCTGAAACCTTCTCTCTTCCTTCTTCCATTCCCCATTGGCCTCCAGGTCAAGGCTT TGGCTCTGGAACAATCAATCTCGGCAAATTACAAGTCATCAAAATCACGGATTTTGAATT TATATGGAGATACAGATCCACAGAGAAGAAGAAGAACATTTCATTTTACAAACCAAAGGG ATTGTTACCTAAAGACTTCCATTGCTTAGGTCACTACTGTCAGTCTGATTCTCATCCTTT GAGAGGTTATGTACTTGCGGCAAGAGATTTAGTGGATTCATTAGAACAGGTAGAGAAACC TGCATTAGTGGAACCTGTTGATTTTACTCTTGTCTGGAGCTCAAATGATTCAGCAGAAAA TGAATGTAGTAGTAAGAGCGAATGCGGTTACTTCTGGTTACCGCAGCCTCCTGAAGGGTA TAGATCGATCGGTTTTGTGGTTACAAAGACTTCCGTGAAACCTGAGTTGAATGAAGTTAG ATGTGTTAGAGCTGATCTTACTGATATATGTGAACCCCACAATGTCATTGTCACTGCTGT TTCAGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAACTCGGCCTTCAGACCGAGGAAT GTGGGGCAAAGGTGTCTCTGCAGGTACTTTCTTCTGCAGAACTCGGCTTGTTGCTGCTAG AGAAGATCTTGGTATCGGTATTGCTTGTCTAAAGAATCTAGATTTGAGTTTACATGCGAT GCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTATGGTCCTACACTAGTCTTCCA TCCTGGTGAAACTTACTTACCTTCTTCTGTTTCGTGGTTCTTCAAAAATGGTGCAGTTCT CTGCGAAAAGGGAAATCCAATCGAGGAACCTATCGATGAAAATGGTTCGAATTTGCCTCA AGGAGGAAGCAATGACAAGCAGTTTTGGATTGATTTGCCGTGTGATGATCAACAAAGAGA TTTCGTCAAGCGAGGAAACCTTGAAAGCTCGAAACTTTACATTCATATTAAGCCTGCTCT TGGAGGAACGTTCACGGATCTTGTCTTCTGGATCTTCTGTCCATTTAACGGACCAGCAAC CTTAAAACTAGGACTCGTCGATATCTCATTGATCAGTATTGGCCAACACGTCTGCGATTG GGAACATTTCACTCTCCGAATCAGCAATTTCTCTGGTGAGCTTTACTCAATCTACTTGTC TCAACACAGTGGCGGCGAGTGGATCGAAGCATACGACCTTGAAATCATTCCCGGAAGCAA CAAAGCCGTTGTTTACTCTTCAAAACATGGTCACGCAAGCTTTCCTAGGGCTGGGACTTA CTTACAGGGATCGACAATGCTTGGGATTGGGATAAGAAATGACACTGCGCGTAGTGAACT CTTGGTAGATTCGAGCTCACGGTACGAGATCATTGCAGCGGAGTATCTCAGCGGAAACAG TGTGTTGGCAGAACCGCCGTGGTTGCAGTACATGAGAGAATGGGGACCAAAGGTTGTGTA CGATTCAAGAGAGGAGATAGAGAGATTGGTGAATCGATTTCCGAGGACGGTTAGGGTTTC GCTTGCCACAGTGCTTAGAAAACTTCCGGTGGAATTATCCGGCGAGGAAGGTCCTACAGG ACCAAAGGAGAAGAACAATTGGTATGGCGATGAAAGATGTTGAAATTCTCACTGTTGGGA AACAGATGTGGTGAGATTACCATCGGAGCCCTAACTGTGTAACTTGTAAAGGAAGATGAA GCTTTGATTGCGCAAGAGATTAATTACACAATTAGCGTAGGATTAACGTAAAACTTGTCG TTAGAAGTGTATACAAGTGGGTCCCATCATGTATTTAATTAAAATAATAAAGTTATATAG ACGAACAAAC