Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G04020.1
CDS Infomation	\| breast cancer associated RING 1 \| Chr1:1036610-1040045 FORWARD LENGTH=2142 \| 201606
Sequence	ATGGCGGAATTTACTAACATGCTAATGAATCCATGGGTTCTTCATCTCCAGAAGCTCGAG CTCGAGCTCAAGTGCCCTCTATGCTTAAAATTGCTTAATCGACCGGTGTTGCTTCCTTGC GACCACGTCTTCTGCGATTCATGTGTACACAAATCGTCGCAAGTTGAATCGGGATGTCCT GTCTGCAAATCTAAACATCCCAAAAAGGCTAGGAGAGATCTTCGATTCATGGAGAGTGTT ATAAGCATATACAAGAGCTTGAATGCAGCTGTTAGTGTTCATCTCCCACAATTACAGATT CCAAATGATTGCAACTACAAGAACGATGCATTGAACAATTCCAACAGCCCTAAACATGGC GAATCTGAAGATTCTGAGATGACTGACAAGGATGTGAGCAAGCGCAGTGGTGGTACTGAT TCTTCTAGTCGTGATGGTTCTCCTCTTCCGACCTCAGAAGAAAGTGATCCAAGACCTAAG CATCAGGATTGGACTGAAAAGCAGTTGAGTGATCATCTCCTATTATATGAGTTTGAATCA GAGTATGATGCTGCCAATCACACTCCGGAAAGTTATACAGAACAAGCTGCAAAAAATGTG AGGGACATCACTGCTTCTGAGCAGCCTAGCAATGCTGCAAGGAAGCGGATATGTGGTGAT TCCTTTATCCAGGAAAGCAGTCCGAATCCTAAGACTCAGGATCCGACTTTGCTGCGGTTG ATGGAGAGCCTCCGGTCAGATGATCCCACTGATTATGTTAAAGCACAGAACCATCAGTTA CCCAAAAGTCATACAGAACAAGATTCAAAAAGGAAGCGTGACATCACCGCTTCTGATGCA ATGGAAAATCATCTGAAGGTCCCCAAGAGGGAGAATAATCTGATGCAAAAATCTGCTGAT ATTGACTGCAATGGTAAATGCTCTGCAAACTCTGATGATCAGCTAAGTGAGAAAATCTCA AAGGCATTAGAACAAACATCATCCAACATAACCATTTGTGGTTTCTGCCAATCCGCTAGG GTATCTGAGGCCACTGGAGAAATGCTGCATTACTCTAGGGGAAGACCGGTGGATGGAGAT GACATCTTCCGCTCCAATGTTATCCATGTCCATAGCGCATGTATCGAATGGGCACCGCAA GTTTACTATGAAGGTGACACAGTGAAGAACCTGAAAGCAGAACTGGCAAGGGGGATGAAA ATCAAGTGCACTAAATGTAGTCTGAAAGGTGCTGCCTTAGGCTGCTTTGTCAAGTCTTGC CGTCGAAGCTATCATGTTCCATGTGCAAGAGAGATTTCTAGATGCCGTTGGGATTATGAA GATTTTCTTCTACTTTGTCCGGCTCATTCTTCTGTCAAATTCCCGAACGAGAAGTCTGGA CATCGCGTTTCCAGAGCCGAGCCCTTACCAAAAATAAATCCTGCTGAGCTATGTTCTTTG GAACAAACACCAGCTTTTACAAAAGAGCTTGTTCTCTGTGGATCAGCACTCTCTAAAAGT GATAAGAAACTGATGGAAAGTTTAGCCGTTCGATTTAACGCGACCATATCAAGGTACTGG AACCCAAGTGTTACACATGTGATTGCTTCTACAGATGAAAAAGGAGCTTGCACAAGAACT TTGAAGGTTCTTATGGGTATTCTCAATGGAAAATGGATTATCAATGCAGCTTGGATGAAA GCAAGCCTAAAAGCTTCTCAACCTGTTGATGAAGAACCATTCGAGATTCAAATTGATACT CAAGGATGTCAAGATGGACCAAAAACCGCAAGACTCAGAGCAGAAACTAATAAACCAAAG CTCTTTGAGGGCTTGAAGTTCTATTTCTTTGGAGATTTCTATAAAGGATACAAGGAAGAC CTTCAGAATCTAGTCAAAGTCGCTGGTGGTACAATCTTGAACACAGAGGATGAGCTTGGT GCAGAAAGCAGCAACAATGTCAATGACCAAAGATCATCATCGATTGTGGTTTACAACATT GATCCTCCACATGGATGTGCCTTAGGTGAAGAAGTCACAATCATTTGGCAACGAGCTAAT GACGCAGAAGCTTTAGCAAGCCAAACTGGGTCTCGTCTCGTTGGTCACACATGGGTCTTG GAGTCCATTGCTGGTTACAAGTTACATCCTGTGATTGGCTAA

Peptide Sequence

PEP ID	AT1G04020.1
PEP Infomation	\| breast cancer associated RING 1 \| Chr1:1036610-1040045 FORWARD LENGTH=713 \| 201606
Sequence	MAEFTNMLMNPWVLHLQKLELELKCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVESGCP VCKSKHPKKARRDLRFMESVISIYKSLNAAVSVHLPQLQIPNDCNYKNDALNNSNSPKHG ESEDSEMTDKDVSKRSGGTDSSSRDGSPLPTSEESDPRPKHQDWTEKQLSDHLLLYEFES EYDAANHTPESYTEQAAKNVRDITASEQPSNAARKRICGDSFIQESSPNPKTQDPTLLRL MESLRSDDPTDYVKAQNHQLPKSHTEQDSKRKRDITASDAMENHLKVPKRENNLMQKSAD IDCNGKCSANSDDQLSEKISKALEQTSSNITICGFCQSARVSEATGEMLHYSRGRPVDGD DIFRSNVIHVHSACIEWAPQVYYEGDTVKNLKAELARGMKIKCTKCSLKGAALGCFVKSC RRSYHVPCAREISRCRWDYEDFLLLCPAHSSVKFPNEKSGHRVSRAEPLPKINPAELCSL EQTPAFTKELVLCGSALSKSDKKLMESLAVRFNATISRYWNPSVTHVIASTDEKGACTRT LKVLMGILNGKWIINAAWMKASLKASQPVDEEPFEIQIDTQGCQDGPKTARLRAETNKPK LFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSNNVNDQRSSSIVVYNI DPPHGCALGEEVTIIWQRANDAEALASQTGSRLVGHTWVLESIAGYKLHPVIG

Transcript Sequence

Transcript ID	AT1G04020.1
Transcript Infomation	\| breast cancer associated RING 1 \| Chr1:1036493-1040262 FORWARD LENGTH=2476 \| 201606
Sequence	CTAAATTCTCAAAGTAAATACCAATCGCACGGAGACGAAGCAAGGAAGTGCATCTTCTCC TTCTCTTCTCGGTTTCAAGAGCTTTCGTCATTTAGATCTGGGTTTTGTACATCACCAATG GCGGAATTTACTAACATGCTAATGAATCCATGGGTTCTTCATCTCCAGAAGCTCGAGCTC GAGCTCAAGTGCCCTCTATGCTTAAAATTGCTTAATCGACCGGTGTTGCTTCCTTGCGAC CACGTCTTCTGCGATTCATGTGTACACAAATCGTCGCAAGTTGAATCGGGATGTCCTGTC TGCAAATCTAAACATCCCAAAAAGGCTAGGAGAGATCTTCGATTCATGGAGAGTGTTATA AGCATATACAAGAGCTTGAATGCAGCTGTTAGTGTTCATCTCCCACAATTACAGATTCCA AATGATTGCAACTACAAGAACGATGCATTGAACAATTCCAACAGCCCTAAACATGGCGAA TCTGAAGATTCTGAGATGACTGACAAGGATGTGAGCAAGCGCAGTGGTGGTACTGATTCT TCTAGTCGTGATGGTTCTCCTCTTCCGACCTCAGAAGAAAGTGATCCAAGACCTAAGCAT CAGGATTGGACTGAAAAGCAGTTGAGTGATCATCTCCTATTATATGAGTTTGAATCAGAG TATGATGCTGCCAATCACACTCCGGAAAGTTATACAGAACAAGCTGCAAAAAATGTGAGG GACATCACTGCTTCTGAGCAGCCTAGCAATGCTGCAAGGAAGCGGATATGTGGTGATTCC TTTATCCAGGAAAGCAGTCCGAATCCTAAGACTCAGGATCCGACTTTGCTGCGGTTGATG GAGAGCCTCCGGTCAGATGATCCCACTGATTATGTTAAAGCACAGAACCATCAGTTACCC AAAAGTCATACAGAACAAGATTCAAAAAGGAAGCGTGACATCACCGCTTCTGATGCAATG GAAAATCATCTGAAGGTCCCCAAGAGGGAGAATAATCTGATGCAAAAATCTGCTGATATT GACTGCAATGGTAAATGCTCTGCAAACTCTGATGATCAGCTAAGTGAGAAAATCTCAAAG GCATTAGAACAAACATCATCCAACATAACCATTTGTGGTTTCTGCCAATCCGCTAGGGTA TCTGAGGCCACTGGAGAAATGCTGCATTACTCTAGGGGAAGACCGGTGGATGGAGATGAC ATCTTCCGCTCCAATGTTATCCATGTCCATAGCGCATGTATCGAATGGGCACCGCAAGTT TACTATGAAGGTGACACAGTGAAGAACCTGAAAGCAGAACTGGCAAGGGGGATGAAAATC AAGTGCACTAAATGTAGTCTGAAAGGTGCTGCCTTAGGCTGCTTTGTCAAGTCTTGCCGT CGAAGCTATCATGTTCCATGTGCAAGAGAGATTTCTAGATGCCGTTGGGATTATGAAGAT TTTCTTCTACTTTGTCCGGCTCATTCTTCTGTCAAATTCCCGAACGAGAAGTCTGGACAT CGCGTTTCCAGAGCCGAGCCCTTACCAAAAATAAATCCTGCTGAGCTATGTTCTTTGGAA CAAACACCAGCTTTTACAAAAGAGCTTGTTCTCTGTGGATCAGCACTCTCTAAAAGTGAT AAGAAACTGATGGAAAGTTTAGCCGTTCGATTTAACGCGACCATATCAAGGTACTGGAAC CCAAGTGTTACACATGTGATTGCTTCTACAGATGAAAAAGGAGCTTGCACAAGAACTTTG AAGGTTCTTATGGGTATTCTCAATGGAAAATGGATTATCAATGCAGCTTGGATGAAAGCA AGCCTAAAAGCTTCTCAACCTGTTGATGAAGAACCATTCGAGATTCAAATTGATACTCAA GGATGTCAAGATGGACCAAAAACCGCAAGACTCAGAGCAGAAACTAATAAACCAAAGCTC TTTGAGGGCTTGAAGTTCTATTTCTTTGGAGATTTCTATAAAGGATACAAGGAAGACCTT CAGAATCTAGTCAAAGTCGCTGGTGGTACAATCTTGAACACAGAGGATGAGCTTGGTGCA GAAAGCAGCAACAATGTCAATGACCAAAGATCATCATCGATTGTGGTTTACAACATTGAT CCTCCACATGGATGTGCCTTAGGTGAAGAAGTCACAATCATTTGGCAACGAGCTAATGAC GCAGAAGCTTTAGCAAGCCAAACTGGGTCTCGTCTCGTTGGTCACACATGGGTCTTGGAG TCCATTGCTGGTTACAAGTTACATCCTGTGATTGGCTAATTTAAGAGGAAGAGACAAAAG ACATTTCAATTTCCCTACACATATGTAACATAGTTTAATTTTACTATTTTTGATTTCGTA AGATAACAAAACAGATTCGTGTTTGAACGCATATAAAATTCCAACTTTTACTTTCGAAAA ACAAAGCTTTGTAACTTAAAGTTTGGAAATCTTACCGATTAATGACAGAATTAATGTTTT TAATGAAAAATAAATT