Gene sequences

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Trait-Related Loci

Arabidopsis thaliana

CDS Sequence

CDS ID	AT1G03540.1
CDS Infomation	\| Pentatricopeptide repeat (PPR-like) superfamily protein \| Chr1:883782-885611 FORWARD LENGTH=1830 \| 201606
Sequence	ATGAATCTCATCATCCTGAAGCGCCATTTCAGTCAACACGCCTCTTTATGTCTCACGCCG TCAATTTCTTCCTCTGCTCCGACGAAACAATCCCGGATCCTGGAGCTTTGTAAATTGGGT CAGCTCACCGAAGCCATTCGGATCCTAAACTCAACACACTCGTCTGAGATCCCCGCAACG CCAAAGCTTTATGCCTCTCTCTTGCAAACATGCAACAAAGTCTTCTCCTTTATCCATGGC ATTCAGTTTCATGCCCATGTCGTCAAATCGGGTCTGGAAACGGACCGAAACGTTGGGAAC AGCTTGCTCTCTCTGTACTTCAAGTTGGGACCTGGTATGAGGGAGACTCGGAGAGTTTTC GATGGTAGATTCGTCAAAGACGCCATCTCGTGGACTTCGATGATGTCTGGATACGTTACC GGTAAAGAACACGTTAAGGCGCTTGAGGTGTTTGTGGAGATGGTGAGTTTTGGTTTGGAT GCGAATGAGTTTACGTTGTCTTCGGCGGTTAAGGCTTGCTCTGAGCTTGGAGAAGTTAGG CTAGGGAGATGTTTCCATGGTGTTGTTATTACTCATGGGTTCGAGTGGAACCATTTTATC TCTAGCACATTGGCGTATTTGTACGGTGTGAATAGAGAACCAGTAGATGCACGCCGAGTG TTCGACGAAATGCCTGAGCCAGATGTTATTTGTTGGACAGCTGTGCTTTCTGCGTTTTCT AAGAACGACTTGTACGAGGAAGCTTTGGGACTTTTTTATGCGATGCATAGAGGGAAAGGG TTGGTGCCTGATGGGTCTACATTTGGAACGGTTTTGACTGCTTGTGGTAATCTGAGGAGG CTGAAGCAAGGGAAAGAGATTCATGGGAAGCTTATTACAAATGGGATAGGTAGCAATGTG GTGGTCGAGAGTAGTCTTCTTGATATGTATGGTAAATGTGGATCCGTACGGGAGGCTAGG CAAGTGTTCAATGGAATGTCTAAGAAAAACAGTGTTTCTTGGTCTGCCTTACTCGGGGGA TACTGTCAGAATGGAGAGCATGAAAAAGCAATTGAGATTTTCAGGGAGATGGAAGAGAAA GATCTGTACTGTTTCGGCACTGTTCTTAAGGCGTGTGCTGGTTTGGCGGCAGTGAGACTT GGGAAAGAAATTCATGGCCAGTATGTGAGAAGAGGGTGTTTTGGTAATGTGATTGTAGAA TCGGCTTTAATTGACTTGTATGGGAAATCCGGGTGCATTGATTCTGCTAGTCGTGTTTAC TCCAAGATGTCAATTAGGAACATGATAACGTGGAACGCAATGCTCTCTGCGCTTGCTCAG AATGGAAGAGGTGAAGAAGCTGTTAGTTTCTTCAATGATATGGTTAAAAAGGGGATAAAG CCTGACTACATCAGTTTTATTGCGATTCTTACTGCATGTGGTCATACGGGAATGGTTGAC GAGGGACGGAATTACTTTGTGTTGATGGCTAAGAGTTACGGGATTAAACCAGGTACTGAG CATTACAGTTGCATGATTGACCTTCTAGGACGTGCAGGTTTGTTTGAAGAAGCGGAGAAT CTGTTGGAGAGAGCAGAGTGTAGAAATGATGCGTCTCTGTGGGGAGTTCTGCTTGGACCT TGTGCTGCAAATGCAGATGCCTCCAGAGTTGCAGAGCGGATTGCAAAGAGAATGATGGAG TTGGAACCAAAGTACCACATGAGTTATGTGCTTCTCAGTAACATGTACAAGGCGATAGGT CGCCATGGTGATGCACTCAATATTCGTAAGTTAATGGTTAGACGAGGGGTAGCAAAGACT GTTGGACAGAGCTGGATTGATGCTCACTAG

Peptide Sequence

PEP ID	AT1G03540.1
PEP Infomation	\| Pentatricopeptide repeat (PPR-like) superfamily protein \| Chr1:883782-885611 FORWARD LENGTH=609 \| 201606
Sequence	MNLIILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPAT PKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVF DGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVR LGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFS KNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNV VVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT VGQSWIDAH

Transcript Sequence

Transcript ID	AT1G03540.1
Transcript Infomation	\| Pentatricopeptide repeat (PPR-like) superfamily protein \| Chr1:883683-885611 FORWARD LENGTH=1929 \| 201606
Sequence	ATTAGATTTACCAATTTGATTAATTTTCAATGTTCCATTAGCTTTATTTATAAGTAACGA ACTTGGAAGAATTGTTCACCGGTGATTGTGGTGCCTCCGATGAATCTCATCATCCTGAAG CGCCATTTCAGTCAACACGCCTCTTTATGTCTCACGCCGTCAATTTCTTCCTCTGCTCCG ACGAAACAATCCCGGATCCTGGAGCTTTGTAAATTGGGTCAGCTCACCGAAGCCATTCGG ATCCTAAACTCAACACACTCGTCTGAGATCCCCGCAACGCCAAAGCTTTATGCCTCTCTC TTGCAAACATGCAACAAAGTCTTCTCCTTTATCCATGGCATTCAGTTTCATGCCCATGTC GTCAAATCGGGTCTGGAAACGGACCGAAACGTTGGGAACAGCTTGCTCTCTCTGTACTTC AAGTTGGGACCTGGTATGAGGGAGACTCGGAGAGTTTTCGATGGTAGATTCGTCAAAGAC GCCATCTCGTGGACTTCGATGATGTCTGGATACGTTACCGGTAAAGAACACGTTAAGGCG CTTGAGGTGTTTGTGGAGATGGTGAGTTTTGGTTTGGATGCGAATGAGTTTACGTTGTCT TCGGCGGTTAAGGCTTGCTCTGAGCTTGGAGAAGTTAGGCTAGGGAGATGTTTCCATGGT GTTGTTATTACTCATGGGTTCGAGTGGAACCATTTTATCTCTAGCACATTGGCGTATTTG TACGGTGTGAATAGAGAACCAGTAGATGCACGCCGAGTGTTCGACGAAATGCCTGAGCCA GATGTTATTTGTTGGACAGCTGTGCTTTCTGCGTTTTCTAAGAACGACTTGTACGAGGAA GCTTTGGGACTTTTTTATGCGATGCATAGAGGGAAAGGGTTGGTGCCTGATGGGTCTACA TTTGGAACGGTTTTGACTGCTTGTGGTAATCTGAGGAGGCTGAAGCAAGGGAAAGAGATT CATGGGAAGCTTATTACAAATGGGATAGGTAGCAATGTGGTGGTCGAGAGTAGTCTTCTT GATATGTATGGTAAATGTGGATCCGTACGGGAGGCTAGGCAAGTGTTCAATGGAATGTCT AAGAAAAACAGTGTTTCTTGGTCTGCCTTACTCGGGGGATACTGTCAGAATGGAGAGCAT GAAAAAGCAATTGAGATTTTCAGGGAGATGGAAGAGAAAGATCTGTACTGTTTCGGCACT GTTCTTAAGGCGTGTGCTGGTTTGGCGGCAGTGAGACTTGGGAAAGAAATTCATGGCCAG TATGTGAGAAGAGGGTGTTTTGGTAATGTGATTGTAGAATCGGCTTTAATTGACTTGTAT GGGAAATCCGGGTGCATTGATTCTGCTAGTCGTGTTTACTCCAAGATGTCAATTAGGAAC ATGATAACGTGGAACGCAATGCTCTCTGCGCTTGCTCAGAATGGAAGAGGTGAAGAAGCT GTTAGTTTCTTCAATGATATGGTTAAAAAGGGGATAAAGCCTGACTACATCAGTTTTATT GCGATTCTTACTGCATGTGGTCATACGGGAATGGTTGACGAGGGACGGAATTACTTTGTG TTGATGGCTAAGAGTTACGGGATTAAACCAGGTACTGAGCATTACAGTTGCATGATTGAC CTTCTAGGACGTGCAGGTTTGTTTGAAGAAGCGGAGAATCTGTTGGAGAGAGCAGAGTGT AGAAATGATGCGTCTCTGTGGGGAGTTCTGCTTGGACCTTGTGCTGCAAATGCAGATGCC TCCAGAGTTGCAGAGCGGATTGCAAAGAGAATGATGGAGTTGGAACCAAAGTACCACATG AGTTATGTGCTTCTCAGTAACATGTACAAGGCGATAGGTCGCCATGGTGATGCACTCAAT ATTCGTAAGTTAATGGTTAGACGAGGGGTAGCAAAGACTGTTGGACAGAGCTGGATTGAT GCTCACTAG