Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0177g00360.t01
CDS Infomation

cds chromosome:12X:19:6198196:6205543:-1 gene:VIT_19s0177g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trafficking protein particle complex subunit [Source:UniProtKB/TrEMBL;Acc:A5AU19]
Sequence

ATGGCTCCCGCTGCTCCAAGATCTGGAGATGCAATATTCGCTAACGTTGAGCGCGTGAAT
GCGGAACTGTTCACACTAACCTATGGTGCGATCGTGCGTCAACTGCTTACGGATCTGGAG
GAGGTTGAAGAAGTCAACAAACAGCTCGATCAAATGGGTTATAATATTGGAATTCGATTG
ATTGATGAGTTTCTAGCAAAATCTAACGTCTCCAGATGCGTCGACTTCAAGGAGACAGCT
GAAGCAATTGCAAAGGTTGGTTTCAAAATGTTCTTGGGGGTCACTGCATCAGTGACCAAT
TGGGATGCTGATGGTACAAGTTGCAGTCTTGTTTTGGAGGATAATCCACTGGTAGATTTT
GTTGAGCTTCCTGATACTTGTCAAGGTCTGTACTACTGCAACATCTTGAGTGGAGTTGTT
AGAGGAGCTCTAGAAATGGTGTCAATGAAGACTGAAGTCACATGGATCCGTGATATGCTT
CGAGGGGATGATGCTTATGAGTTGCAGGTAAAACTTCTGAAGCAAGTTCCAGAAGAATAC
CCTTACAAAGATGACGAGTAA

Peptide Sequence

PEP ID

VIT_19s0177g00360.t01
PEP Infomation

pep chromosome:12X:19:6198196:6205543:-1 gene:VIT_19s0177g00360 transcript:VIT_19s0177g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trafficking protein particle complex subunit [Source:UniProtKB/TrEMBL;Acc:A5AU19]
Sequence

MAPAAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL
IDEFLAKSNVSRCVDFKETAEAIAKVGFKMFLGVTASVTNWDADGTSCSLVLEDNPLVDF
VELPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWIRDMLRGDDAYELQVKLLKQVPEEY
PYKDDE

Transcript Sequence

Transcript ID

VIT_19s0177g00360.t01
Transcript Infomation

cdna chromosome:12X:19:6198196:6205543:-1 gene:VIT_19s0177g00360 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trafficking protein particle complex subunit [Source:UniProtKB/TrEMBL;Acc:A5AU19]
Sequence

ACGAATCAAGCCATTGAATCAACATCGGCTCAGTTCTCCATCCCCATATTCGTCCTTTCA
CTTCTAACTCCAGCTTCCATGGCTCCCGCTGCTCCAAGATCTGGAGATGCAATATTCGCT
AACGTTGAGCGCGTGAATGCGGAACTGTTCACACTAACCTATGGTGCGATCGTGCGTCAA
CTGCTTACGGATCTGGAGGAGGTTGAAGAAGTCAACAAACAGCTCGATCAAATGGGTTAT
AATATTGGAATTCGATTGATTGATGAGTTTCTAGCAAAATCTAACGTCTCCAGATGCGTC
GACTTCAAGGAGACAGCTGAAGCAATTGCAAAGGTTGGTTTCAAAATGTTCTTGGGGGTC
ACTGCATCAGTGACCAATTGGGATGCTGATGGTACAAGTTGCAGTCTTGTTTTGGAGGAT
AATCCACTGGTAGATTTTGTTGAGCTTCCTGATACTTGTCAAGGTCTGTACTACTGCAAC
ATCTTGAGTGGAGTTGTTAGAGGAGCTCTAGAAATGGTGTCAATGAAGACTGAAGTCACA
TGGATCCGTGATATGCTTCGAGGGGATGATGCTTATGAGTTGCAGGTAAAACTTCTGAAG
CAAGTTCCAGAAGAATACCCTTACAAAGATGACGAGTAAGAAGCTAGCTAGCTTTCCTTG
ATGTTGATGAGTACATGCAGTGAGATGTTTTATTATTGTCTTCTAACACAAATGATTCCT
CTTTACAGTTTGAAAGATTTTTGTTTCATATAAACTGATCCAATTTTAGAAGGGTTAGTG
ATTGATCGAACCAAG