Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0177g00320.t01
CDS Infomation

cds chromosome:12X:19:6172553:6176259:1 gene:VIT_19s0177g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGCATCTTCAAACAACTACATCATCTCGGGTTGTTCTTCTTCAATCTTCCTCTTCT
CCCCCTATCCGCAGGGGAATGCCAAGCAAACTAATGTTGTGCTCTTTTGAGCACCCCACA
TCAAGTAAGGCTGTGGCCAGAAATGTATTATCTGGGCTTGCTGCTTCAGTTGTAATCCTC
TCACAAGCAAATCAGGTAATTGCAGAAGGTTTATCTCACCCCAATAATTTATGCCAGCTT
GCAAGTGCTACCAGTAACACAATCACTCTTCCACTTGATGAGGGGTCTGGGGAAAGAAGT
GGGAAACTAATGATGATGAGAGGTATGTCAGCTAAGGATTTTGACCCAGTGAGATATTCT
GGAAGATGGTTTGAAGTAGCTTCCCTCAAACGTGGATTTGCTGGACAAGGCCAAGAAGAT
TGCCATTGCACTCAGGGTGTATATACATTTGACATGGAATCACCTGCTATCCAAGTTGAT
ACTTTTTGTGTTCATGGGGGCCCTGATGGATATATTACTGGGATTCGGGGAAAGGTTCAA
TGCCTGGAAGAGGAAGAATTGGAGAAAAGTGCAACTGATCTAGAAAAACAAGTGATGATT
AGAGAAAAATGTTACCTTCGTTTTCCTACATTGCCATTTATTCCCAAGGAGCCTTATGAT
GTGATTGCTACTGATTATGACACTTTTGCTCTTGTGTCGGGAGCAAAAGACAGGAGTTTT
ATTCAGATTTACTCAAGGACGCCTAATCCTGGACCTAAATTCATAGAGAAGTACAAAGCT
TACTTAGCAAACTTTGGGTATGATCCAAGTAAGATCAAGGACACTCCACAAGACTGTGAG
GTGATGTCTAATAGTAAGCTAGCAGCGATGATGTCCATGTCCGGAATGCAACAGGCTCTA
ACAAACCAGTTTCCTGATCTAGGATTAAAATCACCCATCGAATTTAACCCCTTTACAAGT
GTGTTTGACACTTTGAAGAAGCTTGTTGAGCTTTATTTCAAGTAG

Peptide Sequence

PEP ID

VIT_19s0177g00320.t01
PEP Infomation

pep chromosome:12X:19:6172553:6176259:1 gene:VIT_19s0177g00320 transcript:VIT_19s0177g00320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMHLQTTTSSRVVLLQSSSSPPIRRGMPSKLMLCSFEHPTSSKAVARNVLSGLAASVVIL
SQANQVIAEGLSHPNNLCQLASATSNTITLPLDEGSGERSGKLMMMRGMSAKDFDPVRYS
GRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMESPAIQVDTFCVHGGPDGYITGIRGKVQ
CLEEEELEKSATDLEKQVMIREKCYLRFPTLPFIPKEPYDVIATDYDTFALVSGAKDRSF
IQIYSRTPNPGPKFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMSGMQQAL
TNQFPDLGLKSPIEFNPFTSVFDTLKKLVELYFK

Transcript Sequence

Transcript ID

VIT_19s0177g00320.t01
Transcript Infomation

cdna chromosome:12X:19:6172553:6176259:1 gene:VIT_19s0177g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAAGCGAAGCTTTGAATGAATTAAGCACACAGAGCGAGAGAAGATGATGCATCTTCA
AACAACTACATCATCTCGGGTTGTTCTTCTTCAATCTTCCTCTTCTCCCCCTATCCGCAG
GGGAATGCCAAGCAAACTAATGTTGTGCTCTTTTGAGCACCCCACATCAAGTAAGGCTGT
GGCCAGAAATGTATTATCTGGGCTTGCTGCTTCAGTTGTAATCCTCTCACAAGCAAATCA
GGTAATTGCAGAAGGTTTATCTCACCCCAATAATTTATGCCAGCTTGCAAGTGCTACCAG
TAACACAATCACTCTTCCACTTGATGAGGGGTCTGGGGAAAGAAGTGGGAAACTAATGAT
GATGAGAGGTATGTCAGCTAAGGATTTTGACCCAGTGAGATATTCTGGAAGATGGTTTGA
AGTAGCTTCCCTCAAACGTGGATTTGCTGGACAAGGCCAAGAAGATTGCCATTGCACTCA
GGGTGTATATACATTTGACATGGAATCACCTGCTATCCAAGTTGATACTTTTTGTGTTCA
TGGGGGCCCTGATGGATATATTACTGGGATTCGGGGAAAGGTTCAATGCCTGGAAGAGGA
AGAATTGGAGAAAAGTGCAACTGATCTAGAAAAACAAGTGATGATTAGAGAAAAATGTTA
CCTTCGTTTTCCTACATTGCCATTTATTCCCAAGGAGCCTTATGATGTGATTGCTACTGA
TTATGACACTTTTGCTCTTGTGTCGGGAGCAAAAGACAGGAGTTTTATTCAGATTTACTC
AAGGACGCCTAATCCTGGACCTAAATTCATAGAGAAGTACAAAGCTTACTTAGCAAACTT
TGGGTATGATCCAAGTAAGATCAAGGACACTCCACAAGACTGTGAGGTGATGTCTAATAG
TAAGCTAGCAGCGATGATGTCCATGTCCGGAATGCAACAGGCTCTAACAAACCAGTTTCC
TGATCTAGGATTAAAATCACCCATCGAATTTAACCCCTTTACAAGTGTGTTTGACACTTT
GAAGAAGCTTGTTGAGCTTTATTTCAAGTAGACATTTGAGCTCAAAAGAGT