Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0177g00310.t01
CDS Infomation

cds chromosome:12X:19:6158376:6161965:-1 gene:VIT_19s0177g00310 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tryptophan synthase [Source:UniProtKB/TrEMBL;Acc:F6H9B6]
Sequence

ATGGCCGCCTCTGCAAAAACCCCAATCTCCAGAACCCAGACCACGTCTCTCTATAAGCCC
TACAGCAGTTCTCCCCAATTGCCCTTCAAACTCCTCAAGCTTACACCTACCCCTTGCGCC
GCCAAAGGGCTGTCCATTTGCTGTGCCCTGCAAATGGAGCCCAAGGTTGGACCTGGTTCG
CAGGTGCCGGATTCGTTTGGCCGGTTCGGGAAATTCGGAGGGAAGTACGTTCCCGAAACT
CTGATGCATGCCCTCACCGAGCTGGAGTCTGCATTCCGGGCTCTCTCTGGAGACGTAGAA
TTTCAGAAAGAACTAGATGGAATATTGAAGGACTATGTTGGCAGGGAGAGCCCTCTTTAT
TTTGCAGAGCGGCTTACGGAGCACTATAAGCGTCACAATGGTGAAGGGCCACTCATTTAC
CTCAAGAGGGAAGATCTGAACCATACTGGGGCTCACAAGATTAACAATGCTGTTGCCCAA
GCTCTGCTTGCCAAGCGTTTGGGAAAAACACGCATTATTGCTGAAACTGGTGCTGGTCAG
CATGGAGTTGCAACTGCAACTGTATGTGCTCGGTTTGGATTGCAGTGTATTGTTTATATG
GGTGCCCAAGATATGGAAAGGCAGGCACTTAATGTTTTCAGAATGCGGCTTCTTGGGGCT
GAGGTTAGAGCTGTTCATGCTGGGACAGCTACTCTGAAAGATGCAACATCAGAAGCTATA
CGAGACTGGGTGACTAATGTGGAGACAACCCATTATATTTTGGGTTCTGTTGCTGGGCCC
CATCCTTATCCCATGATGGTCAGGGACTTCCATGCAGTGATTGGCAAAGAAACAAGAAAA
CAGGCAATGGAAAAGTGGGGAGGCAAACCAGATGTGCTGGTTGCATGTGTAGGTGGAGGT
TCCAATGCCATGGGGCTTTTTTATGAATTTGTTGATGATGAAGACGTTAGGCTGATTGGT
GTGGAGGCAGCAGGTTTTGGCTTAGATAGCGGTAAACACGCTGCTACCTTGACTAGAGGG
GAGGTTGGGGTCTTGCATGGCGCGATGAGTTATTTATTACAAGATGATGATGGACAAATA
ATTGAGCCTCATTCTATTAGTGCTGGCCTGGATTACCCTGGAGTTGGGCCAGAGCATAGC
TTTCTGAAAGATTTAGGACGTGCTGAATACCATAGCATCACTGATGAAGAAGCATTGGAA
GCTTTCAAGAGATTATCTCGACTTGAAGGCATAATCCCTGCTCTGGAGACATCGCATGCC
CTGGCTTATTTGGAGAAGCTGTGCCCAACCCTCCCAAATGGGACTAAGGTTGTACTTAAT
TGCAGTGGGAGAGGAGATAAGGATGTTCATACAGCCATTAAGCATTTGCAGGTTTGA

Peptide Sequence

PEP ID

VIT_19s0177g00310.t01
PEP Infomation

pep chromosome:12X:19:6158376:6161965:-1 gene:VIT_19s0177g00310 transcript:VIT_19s0177g00310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tryptophan synthase [Source:UniProtKB/TrEMBL;Acc:F6H9B6]
Sequence

MAASAKTPISRTQTTSLYKPYSSSPQLPFKLLKLTPTPCAAKGLSICCALQMEPKVGPGS
QVPDSFGRFGKFGGKYVPETLMHALTELESAFRALSGDVEFQKELDGILKDYVGRESPLY
FAERLTEHYKRHNGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKTRIIAETGAGQ
HGVATATVCARFGLQCIVYMGAQDMERQALNVFRMRLLGAEVRAVHAGTATLKDATSEAI
RDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQAMEKWGGKPDVLVACVGGG
SNAMGLFYEFVDDEDVRLIGVEAAGFGLDSGKHAATLTRGEVGVLHGAMSYLLQDDDGQI
IEPHSISAGLDYPGVGPEHSFLKDLGRAEYHSITDEEALEAFKRLSRLEGIIPALETSHA
LAYLEKLCPTLPNGTKVVLNCSGRGDKDVHTAIKHLQV

Transcript Sequence

Transcript ID

VIT_19s0177g00310.t01
Transcript Infomation

cdna chromosome:12X:19:6158376:6161965:-1 gene:VIT_19s0177g00310 gene_biotype:protein_coding transcript_biotype:protein_coding description:Tryptophan synthase [Source:UniProtKB/TrEMBL;Acc:F6H9B6]
Sequence

TATAAACTCGCTCTTTCTCTCCAACCAAACATAAAATATGGCCGCCTCTGCAAAAACCCC
AATCTCCAGAACCCAGACCACGTCTCTCTATAAGCCCTACAGCAGTTCTCCCCAATTGCC
CTTCAAACTCCTCAAGCTTACACCTACCCCTTGCGCCGCCAAAGGGCTGTCCATTTGCTG
TGCCCTGCAAATGGAGCCCAAGGTTGGACCTGGTTCGCAGGTGCCGGATTCGTTTGGCCG
GTTCGGGAAATTCGGAGGGAAGTACGTTCCCGAAACTCTGATGCATGCCCTCACCGAGCT
GGAGTCTGCATTCCGGGCTCTCTCTGGAGACGTAGAATTTCAGAAAGAACTAGATGGAAT
ATTGAAGGACTATGTTGGCAGGGAGAGCCCTCTTTATTTTGCAGAGCGGCTTACGGAGCA
CTATAAGCGTCACAATGGTGAAGGGCCACTCATTTACCTCAAGAGGGAAGATCTGAACCA
TACTGGGGCTCACAAGATTAACAATGCTGTTGCCCAAGCTCTGCTTGCCAAGCGTTTGGG
AAAAACACGCATTATTGCTGAAACTGGTGCTGGTCAGCATGGAGTTGCAACTGCAACTGT
ATGTGCTCGGTTTGGATTGCAGTGTATTGTTTATATGGGTGCCCAAGATATGGAAAGGCA
GGCACTTAATGTTTTCAGAATGCGGCTTCTTGGGGCTGAGGTTAGAGCTGTTCATGCTGG
GACAGCTACTCTGAAAGATGCAACATCAGAAGCTATACGAGACTGGGTGACTAATGTGGA
GACAACCCATTATATTTTGGGTTCTGTTGCTGGGCCCCATCCTTATCCCATGATGGTCAG
GGACTTCCATGCAGTGATTGGCAAAGAAACAAGAAAACAGGCAATGGAAAAGTGGGGAGG
CAAACCAGATGTGCTGGTTGCATGTGTAGGTGGAGGTTCCAATGCCATGGGGCTTTTTTA
TGAATTTGTTGATGATGAAGACGTTAGGCTGATTGGTGTGGAGGCAGCAGGTTTTGGCTT
AGATAGCGGTAAACACGCTGCTACCTTGACTAGAGGGGAGGTTGGGGTCTTGCATGGCGC
GATGAGTTATTTATTACAAGATGATGATGGACAAATAATTGAGCCTCATTCTATTAGTGC
TGGCCTGGATTACCCTGGAGTTGGGCCAGAGCATAGCTTTCTGAAAGATTTAGGACGTGC
TGAATACCATAGCATCACTGATGAAGAAGCATTGGAAGCTTTCAAGAGATTATCTCGACT
TGAAGGCATAATCCCTGCTCTGGAGACATCGCATGCCCTGGCTTATTTGGAGAAGCTGTG
CCCAACCCTCCCAAATGGGACTAAGGTTGTACTTAATTGCAGTGGGAGAGGAGATAAGGA
TGTTCATACAGCCATTAAGCATTTGCAGGTTTGATGGTGTTTGTGTGGTGCCATTGATTT
GAACCTTATGCTTGAAGAGATGTGGTTTTGAGTCCCCTAATCTGCAATTCTTTCCCTTGG
TAATAATGTTGTGTGTCTTGAAAAGACTGTCTTATTTATATATGAATACTATGGGTTAGT
AGAAGAGTGTGATTGTTTTTGAATGGTTGAGACATCGGACCCGTAGCGGAATCATACGGC
AACAAA