Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0177g00260.t01
CDS Infomation

cds chromosome:12X:19:6105561:6115659:-1 gene:VIT_19s0177g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGATCGAGACAAAGACTGGGAGTTTCATCTGAGATCCCTCTCTGCCACCGCCAGA
GACTCTAATTTCTCCGCCGACCCCGCCTCCGATCCCAATCTTCTCCCATCCGTGAGGAAG
CTTTATGAATTGTGTAAATCAGAGGAATCTGAGGATTTGGTGGCTAGGGTTTATCCGCAG
ATCAATAAGATCTTTCAGAGATTGGTAGCTTCCGTTTCGCAGTCTCGAACCTCTAATGGC
CTTCTCTTTCTGGCCATTCTTCAGTTTTTCCTTGATTTTGGTGAGATTGTTCTACATGAT
GCTGATCCATCTCTAAGGACATTTTTTCGATCATGCTTGAGCCGTGAGTTTGCAGACCCT
GTTGTTGCAAAAGCAACGCTTGATTTTCTGATTTGGAACAAGAAGAAGATTTTAACTTCT
TTCCCGACGTTACTGCCACAGTTTTTTCCATTACTGCTGAAGCTGATTGCTTGGAATGGA
GAGAAATTAGAGAAATCATTTTTAAAGGTTTTCCCAGGATTAATATCTCCTGGGTCATTT
CTTCCACTGTTCCCATCAGTGTTGGACTTGCCAATATTGGTAGTGGCATTGGAGAAGGTA
GAACGTAGCTCCGGACCACTGATTGGTAGTAGCATAGCTTCAATTCAGAAGAGTACGGCT
CCTGAGATGCTACTTGCGCTAATGGATGAAGCTTATACTGGTTCAACAATAGGAGATGGA
GGAGGAGACTCTGAATCTGAGGATAGCAATGCAATAGATGTAGCTGATCCATTGTTTTTT
GACCTTCTTAAAGATGAGAATGATGGCCTTGCTGAACGGCACTGGACTTCTCCTGGAATT
GCTGCAGCTCTACAGGCTGCTATTAATACCCCTCAGTCTGATAGGCTTAAACAATCACTC
AATATGGCACCTCGGGTTCTTGATATGTATTTTGCTATTGCATTACGTGATGTCAATAAT
TCTTTAATCTGCGCATTACTTCCCCTAATTATGACAAGGAATGCTACAATATTTCCCGAC
AAAATTTTCTCTTATGAGGTTCGAAAGAGGCTCTTAGAATTTATGCTTGCTGCATTCCAG
CGATCTCCAGATTTTATTGCACTGCTGAAGAAGCCTATAATGGACAGACTTGCAGAAGCT
TATGACAGCACTGCAAAGACAGAATTGGCATTGCAATTGTGTTGGGCCATTGGGGAGCAT
GGAGGAGGTGGTGCATCACATGGAGATGCAGCTCGTGAGCTTTTCGAGAGTTTAGAACTA
CTTTTGTATGAAAACCTTTCTTCTAGTCGCCTGGGCTTAAGGCAGGAGTCAGCTCTTAGC
TCCGATGGTGCAACTTTCAGAAAATCATCACAGTCAAGGCTTCTATGTTTTGTTGTGACT
GCTATTGCAAAGCTTGCCACATACCACCGTGAATTATTACCAAGGGCACGTGTATCTCTA
GCCAAGGTAGCTCGATCTCGAATGTCTGATGCGAGGGTTTGGAGACGTGCACATGATTAT
TTGGGCTTAATGAATGAACCAGCAATATGTTTGTCTGTTTTGGGGCCTTCACGACCTTCT
CATGGACATATGCAGAATCCAGGCACTGTCAACTGGAGTGAAGGCAGCAAAAAGATGATT
GCTCATATTCCATTTTACATTTTAGGCGAACAAGAAGGCCTACCCTTCCACGATTTTTCA
TTCTCAGACATCCTCCCGAGAAGAAGATGA

Peptide Sequence

PEP ID

VIT_19s0177g00260.t01
PEP Infomation

pep chromosome:12X:19:6105561:6115659:-1 gene:VIT_19s0177g00260 transcript:VIT_19s0177g00260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVDRDKDWEFHLRSLSATARDSNFSADPASDPNLLPSVRKLYELCKSEESEDLVARVYPQ
INKIFQRLVASVSQSRTSNGLLFLAILQFFLDFGEIVLHDADPSLRTFFRSCLSREFADP
VVAKATLDFLIWNKKKILTSFPTLLPQFFPLLLKLIAWNGEKLEKSFLKVFPGLISPGSF
LPLFPSVLDLPILVVALEKVERSSGPLIGSSIASIQKSTAPEMLLALMDEAYTGSTIGDG
GGDSESEDSNAIDVADPLFFDLLKDENDGLAERHWTSPGIAAALQAAINTPQSDRLKQSL
NMAPRVLDMYFAIALRDVNNSLICALLPLIMTRNATIFPDKIFSYEVRKRLLEFMLAAFQ
RSPDFIALLKKPIMDRLAEAYDSTAKTELALQLCWAIGEHGGGGASHGDAARELFESLEL
LLYENLSSSRLGLRQESALSSDGATFRKSSQSRLLCFVVTAIAKLATYHRELLPRARVSL
AKVARSRMSDARVWRRAHDYLGLMNEPAICLSVLGPSRPSHGHMQNPGTVNWSEGSKKMI
AHIPFYILGEQEGLPFHDFSFSDILPRRR

Transcript Sequence

Transcript ID

VIT_19s0177g00260.t01
Transcript Infomation

cdna chromosome:12X:19:6105561:6115659:-1 gene:VIT_19s0177g00260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTGATCTGCTTCCAAAATGGTTGATCGAGACAAAGACTGGGAGTTTCATCTGAGATCC
CTCTCTGCCACCGCCAGAGACTCTAATTTCTCCGCCGACCCCGCCTCCGATCCCAATCTT
CTCCCATCCGTGAGGAAGCTTTATGAATTGTGTAAATCAGAGGAATCTGAGGATTTGGTG
GCTAGGGTTTATCCGCAGATCAATAAGATCTTTCAGAGATTGGTAGCTTCCGTTTCGCAG
TCTCGAACCTCTAATGGCCTTCTCTTTCTGGCCATTCTTCAGTTTTTCCTTGATTTTGGT
GAGATTGTTCTACATGATGCTGATCCATCTCTAAGGACATTTTTTCGATCATGCTTGAGC
CGTGAGTTTGCAGACCCTGTTGTTGCAAAAGCAACGCTTGATTTTCTGATTTGGAACAAG
AAGAAGATTTTAACTTCTTTCCCGACGTTACTGCCACAGTTTTTTCCATTACTGCTGAAG
CTGATTGCTTGGAATGGAGAGAAATTAGAGAAATCATTTTTAAAGGTTTTCCCAGGATTA
ATATCTCCTGGGTCATTTCTTCCACTGTTCCCATCAGTGTTGGACTTGCCAATATTGGTA
GTGGCATTGGAGAAGGTAGAACGTAGCTCCGGACCACTGATTGGTAGTAGCATAGCTTCA
ATTCAGAAGAGTACGGCTCCTGAGATGCTACTTGCGCTAATGGATGAAGCTTATACTGGT
TCAACAATAGGAGATGGAGGAGGAGACTCTGAATCTGAGGATAGCAATGCAATAGATGTA
GCTGATCCATTGTTTTTTGACCTTCTTAAAGATGAGAATGATGGCCTTGCTGAACGGCAC
TGGACTTCTCCTGGAATTGCTGCAGCTCTACAGGCTGCTATTAATACCCCTCAGTCTGAT
AGGCTTAAACAATCACTCAATATGGCACCTCGGGTTCTTGATATGTATTTTGCTATTGCA
TTACGTGATGTCAATAATTCTTTAATCTGCGCATTACTTCCCCTAATTATGACAAGGAAT
GCTACAATATTTCCCGACAAAATTTTCTCTTATGAGGTTCGAAAGAGGCTCTTAGAATTT
ATGCTTGCTGCATTCCAGCGATCTCCAGATTTTATTGCACTGCTGAAGAAGCCTATAATG
GACAGACTTGCAGAAGCTTATGACAGCACTGCAAAGACAGAATTGGCATTGCAATTGTGT
TGGGCCATTGGGGAGCATGGAGGAGGTGGTGCATCACATGGAGATGCAGCTCGTGAGCTT
TTCGAGAGTTTAGAACTACTTTTGTATGAAAACCTTTCTTCTAGTCGCCTGGGCTTAAGG
CAGGAGTCAGCTCTTAGCTCCGATGGTGCAACTTTCAGAAAATCATCACAGTCAAGGCTT
CTATGTTTTGTTGTGACTGCTATTGCAAAGCTTGCCACATACCACCGTGAATTATTACCA
AGGGCACGTGTATCTCTAGCCAAGGTAGCTCGATCTCGAATGTCTGATGCGAGGGTTTGG
AGACGTGCACATGATTATTTGGGCTTAATGAATGAACCAGCAATATGTTTGTCTGTTTTG
GGGCCTTCACGACCTTCTCATGGACATATGCAGAATCCAGGCACTGTCAACTGGAGTGAA
GGCAGCAAAAAGATGATTGCTCATATTCCATTTTACATTTTAGGCGAACAAGAAGGCCTA
CCCTTCCACGATTTTTCATTCTCAGACATCCTCCCGAGAAGAAGATGAAAGCAGCTTATA
TATTTGCTACCCTGCTTGGACATATTCAGAGATGGCAGAATTAGAGACTCGAAGCTACTG
TAAAAGGAAAACATCAACGAAGATATGTTTTTCTTCTCACCCCATAAATTTTACTTTTTG
TTTTTGGTCAACATAACCCTAATTTTGGGGCTATTCATCTGGCATATCCATATTAATAAC
TAGGAAACATTCGTGACCTGTTGTAATATTCAACCAACACAGCATTGTTTAAACAAAAAA
GAAAAGATTTAATGAAAGAGTGAGGTAAATCAACCCTCTTGAACT