Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0093g00560.t01
CDS Infomation

cds chromosome:12X:19:17668309:17700359:-1 gene:VIT_19s0093g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCTTGCAAATGACTTGGCAGCCGAGTCTCCTCCACCAGAAACGCAAGAATGGTCCT
CCTCTAGGGTTGAAGAATCTCGGCAACTCCTGCTATCTCAACAGCGTCCTACAGTGCTTG
ACATACACACCTCCCCTCGCCAATTTCTGCCTCAATCACCTCCATTCTTCACTCTGCGAT
TCCGCTGTGGATCGAAAACGCGAGTGCCCCTTCTGCATACTGGAGAAGCGAATTGTTCGG
TCTTTGAGCATGGATCTCACCCAGGACGCTCCCTCCAAGATCCAGAGCTGTCTCCGGATA
TTTGCAGAACACTTTCGATTGGGGCGGCAAGAGGATGCCCACGAGTTCTTGCGCTATGTA
ATTGACGCCTGTCACAACACTTGCCTTCGTCTCAAAAAGTTGAGGCGCAAGGGGAACAAC
GATAATGGGCCCTCTACTACTAGTGTGGTCAAGGACATCTTTGGGGGTGCTCTGCAGAGT
CAGGTCAAGTGTCTCTCTTGCGGGGCTGAGTCCAACAAGACCGATGAGATTATGGATATA
AGCCTTGATGTCTTGCATTTCAATTCTCTTAAACAAGCATTACAAAACTTTTTCCAGCCT
GAGGTTTTGGACGGTAACAACAAGTACAAATGTGACAATTGTAAGAAATTGGTGTCAGCA
AGGAAGCAAATGTCTATTCTTCAAGCACCCAATGTCCTTGTAATCCAGCTCAAGAGATTT
GAGGGCTTATATGGTGGGAAGATTGATAAGCTGATTGCATTTGAAGAAGTTTTGGTGCTC
TCGAGCTATATGAACAAAGCAAGCCAGGATTCACATCCCGAGTATAACCTTTTTGCTACT
ATTGTGCATTCAGGCTACTCACCTGAGTCAGGACACTATTATGCATATATCAAGGATGCA
ATGGGTCGCTGGTATTGCTGCAACGATTCTTATGTTTCACTTTCAACCCTGCAGGGGGTT
TTGTCAGAGAAGGTTTACATTCTTTTCTTTTCTCGTACTAATGCAAGGATCTCACCCCCC
AGCAAAGCTTTTGCGTCCCATAATGTGAAGAACCGAGATTGCAATGGCAACAATACATCT
AAAAATCCAAGGACAGCTCTTCCAGTGAAAACAAGGCATACAAAACAAAATGTCGAACAT
TCCTCTGGAATGGATACTTCCACTATATCTAAGGTTGATAAGGTGCCTTCTAGCCTACAG
ATTAAATCGAATAGCTTTGAAAAAACTGTTTCCAAGAGGGTTCTTGCAACTGGTAATGGA
AAACTTGATGTGCATAAGAATCAAATATTGGAAAAGAATGGGGATGTGGTGGAGAAAAGC
GAGAAAGGTACGCCATCTTTAGCAAACAGCAATGGTTTTAGTATAAATAAAAGAGTTGAT
GCTGCTGATAGCGTGAATGGCTTTGTATCTGCAAATGAAAATGATAAACTTCAGAATATT
AGTGGTAATTCGGGAAAAGTGGATTTGTATGAGGGTAATGTTGTGAAAAGCAGGATGACA
GCAGAAGGAAGGTCTAACTTCCATGAAGTGCATAATGGTGGTGTCAAATGTCCCCCTGGT
GTTTCAGGGGTTAAGAGAAAATCACAGGACAAGGGTTCATGCATTTTACTTGCACAAGAT
GCTCATTCTCTGGCAAAAGTTGAAGAATTCAAAGATGGTCTCAAGAAGGAAGCTTCTTTG
GTTCTGAGATCTTGTGGTTGGACGGATAGGCTTTATATTTTCATGCATTCAAGGAAGAGG
TTATGCGCTCAAAAATCAGGAGACCCTCCAAGCAGCAATGAATCAAAGAAGTCATTTATT
GCTGATGCAAAACAATCTTTCATCTCACAAATTCCTGAGTCACTGAAAGAGAAGCTGATT
GAACGTCTAAAATCATTCAGCCAGGAGAAACAAGTTTCAGGTCCTTGA

Peptide Sequence

PEP ID

VIT_19s0093g00560.t01
PEP Infomation

pep chromosome:12X:19:17668309:17700359:-1 gene:VIT_19s0093g00560 transcript:VIT_19s0093g00560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALQMTWQPSLLHQKRKNGPPLGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCD
SAVDRKRECPFCILEKRIVRSLSMDLTQDAPSKIQSCLRIFAEHFRLGRQEDAHEFLRYV
IDACHNTCLRLKKLRRKGNNDNGPSTTSVVKDIFGGALQSQVKCLSCGAESNKTDEIMDI
SLDVLHFNSLKQALQNFFQPEVLDGNNKYKCDNCKKLVSARKQMSILQAPNVLVIQLKRF
EGLYGGKIDKLIAFEEVLVLSSYMNKASQDSHPEYNLFATIVHSGYSPESGHYYAYIKDA
MGRWYCCNDSYVSLSTLQGVLSEKVYILFFSRTNARISPPSKAFASHNVKNRDCNGNNTS
KNPRTALPVKTRHTKQNVEHSSGMDTSTISKVDKVPSSLQIKSNSFEKTVSKRVLATGNG
KLDVHKNQILEKNGDVVEKSEKGTPSLANSNGFSINKRVDAADSVNGFVSANENDKLQNI
SGNSGKVDLYEGNVVKSRMTAEGRSNFHEVHNGGVKCPPGVSGVKRKSQDKGSCILLAQD
AHSLAKVEEFKDGLKKEASLVLRSCGWTDRLYIFMHSRKRLCAQKSGDPPSSNESKKSFI
ADAKQSFISQIPESLKEKLIERLKSFSQEKQVSGP

Transcript Sequence

Transcript ID

VIT_19s0093g00560.t01
Transcript Infomation

cdna chromosome:12X:19:17668309:17700359:-1 gene:VIT_19s0093g00560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATCAAGAGAGATAAGAAGTCCCAAGTCCTCCGGAAGAGCCTCAATCAACCGGACGGCC
CAGCACTCAAAGGAAACAAAACAAAAGGGGGAAAAGAAAAGAGAAAAAACAGAAGGGGCA
AAAACCCCTCAAAGGGAAAAAGAAGAGGATAGGAAGGGAGGAGAGATGCGATCGTGGTTG
TGGCGGTGGTGGTGGGGGAGTAGTATCAGAAGGACGTCGTCCGATGCGGCAAAAGAAGAG
GGAAGTGAGGAGGAAAGAGGTCGTTAATGGCCTTGCAAATGACTTGGCAGCCGAGTCTCC
TCCACCAGAAACGCAAGAATGGTCCTCCTCTAGGGTTGAAGAATCTCGGCAACTCCTGCT
ATCTCAACAGCGTCCTACAGTGCTTGACATACACACCTCCCCTCGCCAATTTCTGCCTCA
ATCACCTCCATTCTTCACTCTGCGATTCCGCTGTGGATCGAAAACGCGAGTGCCCCTTCT
GCATACTGGAGAAGCGAATTGTTCGGTCTTTGAGCATGGATCTCACCCAGGACGCTCCCT
CCAAGATCCAGAGCTGTCTCCGGATATTTGCAGAACACTTTCGATTGGGGCGGCAAGAGG
ATGCCCACGAGTTCTTGCGCTATGTAATTGACGCCTGTCACAACACTTGCCTTCGTCTCA
AAAAGTTGAGGCGCAAGGGGAACAACGATAATGGGCCCTCTACTACTAGTGTGGTCAAGG
ACATCTTTGGGGGTGCTCTGCAGAGTCAGGTCAAGTGTCTCTCTTGCGGGGCTGAGTCCA
ACAAGACCGATGAGATTATGGATATAAGCCTTGATGTCTTGCATTTCAATTCTCTTAAAC
AAGCATTACAAAACTTTTTCCAGCCTGAGGTTTTGGACGGTAACAACAAGTACAAATGTG
ACAATTGTAAGAAATTGGTGTCAGCAAGGAAGCAAATGTCTATTCTTCAAGCACCCAATG
TCCTTGTAATCCAGCTCAAGAGATTTGAGGGCTTATATGGTGGGAAGATTGATAAGCTGA
TTGCATTTGAAGAAGTTTTGGTGCTCTCGAGCTATATGAACAAAGCAAGCCAGGATTCAC
ATCCCGAGTATAACCTTTTTGCTACTATTGTGCATTCAGGCTACTCACCTGAGTCAGGAC
ACTATTATGCATATATCAAGGATGCAATGGGTCGCTGGTATTGCTGCAACGATTCTTATG
TTTCACTTTCAACCCTGCAGGGGGTTTTGTCAGAGAAGGTTTACATTCTTTTCTTTTCTC
GTACTAATGCAAGGATCTCACCCCCCAGCAAAGCTTTTGCGTCCCATAATGTGAAGAACC
GAGATTGCAATGGCAACAATACATCTAAAAATCCAAGGACAGCTCTTCCAGTGAAAACAA
GGCATACAAAACAAAATGTCGAACATTCCTCTGGAATGGATACTTCCACTATATCTAAGG
TTGATAAGGTGCCTTCTAGCCTACAGATTAAATCGAATAGCTTTGAAAAAACTGTTTCCA
AGAGGGTTCTTGCAACTGGTAATGGAAAACTTGATGTGCATAAGAATCAAATATTGGAAA
AGAATGGGGATGTGGTGGAGAAAAGCGAGAAAGGTACGCCATCTTTAGCAAACAGCAATG
GTTTTAGTATAAATAAAAGAGTTGATGCTGCTGATAGCGTGAATGGCTTTGTATCTGCAA
ATGAAAATGATAAACTTCAGAATATTAGTGGTAATTCGGGAAAAGTGGATTTGTATGAGG
GTAATGTTGTGAAAAGCAGGATGACAGCAGAAGGAAGGTCTAACTTCCATGAAGTGCATA
ATGGTGGTGTCAAATGTCCCCCTGGTGTTTCAGGGGTTAAGAGAAAATCACAGGACAAGG
GTTCATGCATTTTACTTGCACAAGATGCTCATTCTCTGGCAAAAGTTGAAGAATTCAAAG
ATGGTCTCAAGAAGGAAGCTTCTTTGGTTCTGAGATCTTGTGGTTGGACGGATAGGCTTT
ATATTTTCATGCATTCAAGGAAGAGGTTATGCGCTCAAAAATCAGGAGACCCTCCAAGCA
GCAATGAATCAAAGAAGTCATTTATTGCTGATGCAAAACAATCTTTCATCTCACAAATTC
CTGAGTCACTGAAAGAGAAGCTGATTGAACGTCTAAAATCATTCAGCCAGGAGAAACAAG
TTTCAGGTCCTTGAACAAGAGCATGACTCTTGACATTTGTTGCTGCCAGGAGCTTGGTAT
ATAATCTGTATTACTAGTAGATGTTTCAGTGACGGCGATATCTTCCATGGAACAGTAACT
CTGGGTGCTTTACCAGCCAGGAATTGAGATCAAAAGCTGAGTCCAAATCTTGCCAGAAAT
TTTCCTTTGCAGTCGGTTTTGGCAGAGAAAAAGTCCAAATGAATTTTATTCATTTGTATG
ATATATCCTTTTTGGCAGTATTTTTAGCATTTATCCCAATTTTATGAGTACATCGCCAAA
TTTTCCTGCAGAATGTGGCCTGGTAGGATCTCGACAGTCATATGCCTTCCATAGTTTTTC
CATCTCAAGTAA