Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0093g00440.t01
CDS Infomation

cds chromosome:12X:19:17406699:17408183:-1 gene:VIT_19s0093g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HR86]
Sequence

ATGGCGAGTCTCTCCAATTCTGTGAAACTCAAGTATATTAAACTTGGCTACCAGTACCTT
GTCAACCACATTCTCACCTTCTTTCTCATACCAATTCTCATGGGTTTTCTCATTAAAATC
CTCAGTCTGGGTCCTGATCAAATCTATGAAATAGGGAGCTCTCTCCACTTTGATCTCCTT
CAATTTCTCGGCTCCTCCTTGATGATCATATTCTTGGCCACCGTCTACTTCATGTCCAAG
CCTCGTTCTGTCTACCTAGTCGACTATGCTTGCTTCAAACCCCCAGCCTCATATCGCGTT
CCCCATGCTACCCTCGTGAAACACTTGAGGCTCAGCAACAAGGATAATCCTGAGATTGTT
GAGTTCCAAAGGCGAATTCTTCAGAGGTCTGGTCTAGGAGATGAGACGTGTTTGGCTCCT
GCAAATCTATATATTCCTCCAACACCCAGCTTGGAGGCTTCAAGGGCTGAAGCGGAGCTT
ATTCTCTTCTCTGTTATTGATGATTTGTTGAAGAAAACCGGGACTAAGACCAAGGACATC
GATATTCTTATTGTGAATTGCAGTATAGTTTCACCTACTCCATCACTGTCTGCTATGGTG
ATTAACAAGTACAAATTGAGGAGTAACATAAAGAGCTTCAATCTTTCTGGTATGGGGTGC
AGTGCTAGCCTTATATCAATTGATTTAGCTAGGGAACTTCTTCAGGTTCATCCCAATTCA
TGTGCTATAGTGGTCAGCACTGAGATCACCACTCCCAATTATTATAGCGGCAACGAGAGA
TCAATGGTTCTTATAAACTGTTTGTTCCGAATGGGTGGTGCAGCCATCCTTTTGTCCAAC
AAAAAAGCAGACAGGAGTCGATCCAAGTACCAATTACTCCATCTTGTTAGAACTCACAAG
GGAGCTGATGATAAGGCTTACCGGTGTATCCATGAACAAGAAGACACACAAGGGATACAA
GGGGTTTCACTCTCTAAAGACCTGATGTTGATTGCTGGGGAGGCCTTGAAGTCCAACATA
ACCACAATTGGACCCCTTGTGTTGCCTGCTTCCGAGCAGCTCAACTTCCTGTTCACACTC
ATCGGCCAAAAAATACTGAAACTTAAGTGGAAGCCATACATTCCTGACTTCAAGCAGGCA
TTTGAGCACTTCTGCATCCATGCGGGCGGGCGAGGGGTGATCGATGAGCTGCAGAAGAAG
CTGCAGTTATCGGCTAAGGACGTGGAGGCGTCCAGGATGACGCTGCACCGCTTTGGCAAC
ACTTCATCTTCTTCCATTTGGTATGAGATGAACTATATCGAGAGTAAAGGGAGGATGAAA
AAAGGTGACCGGATTTGGCAGATTGCCTTCGGAAGTGGATTCAAGTGTAACAGTGCAGTT
TGGAAGTGCAACCGCACAATCACGACGCCAACCGATGGGCCTTGGCTTGACTGCATTGGT
AGGTATCCGGTGTCCATCTCACAGGTCCTGGACCTCTGA

Peptide Sequence

PEP ID

VIT_19s0093g00440.t01
PEP Infomation

pep chromosome:12X:19:17406699:17408183:-1 gene:VIT_19s0093g00440 transcript:VIT_19s0093g00440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HR86]
Sequence

MASLSNSVKLKYIKLGYQYLVNHILTFFLIPILMGFLIKILSLGPDQIYEIGSSLHFDLL
QFLGSSLMIIFLATVYFMSKPRSVYLVDYACFKPPASYRVPHATLVKHLRLSNKDNPEIV
EFQRRILQRSGLGDETCLAPANLYIPPTPSLEASRAEAELILFSVIDDLLKKTGTKTKDI
DILIVNCSIVSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSASLISIDLARELLQVHPNS
CAIVVSTEITTPNYYSGNERSMVLINCLFRMGGAAILLSNKKADRSRSKYQLLHLVRTHK
GADDKAYRCIHEQEDTQGIQGVSLSKDLMLIAGEALKSNITTIGPLVLPASEQLNFLFTL
IGQKILKLKWKPYIPDFKQAFEHFCIHAGGRGVIDELQKKLQLSAKDVEASRMTLHRFGN
TSSSSIWYEMNYIESKGRMKKGDRIWQIAFGSGFKCNSAVWKCNRTITTPTDGPWLDCIG
RYPVSISQVLDL

Transcript Sequence

Transcript ID

VIT_19s0093g00440.t01
Transcript Infomation

cdna chromosome:12X:19:17406699:17408183:-1 gene:VIT_19s0093g00440 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:F6HR86]
Sequence

AAAAATGGCGAGTCTCTCCAATTCTGTGAAACTCAAGTATATTAAACTTGGCTACCAGTA
CCTTGTCAACCACATTCTCACCTTCTTTCTCATACCAATTCTCATGGGTTTTCTCATTAA
AATCCTCAGTCTGGGTCCTGATCAAATCTATGAAATAGGGAGCTCTCTCCACTTTGATCT
CCTTCAATTTCTCGGCTCCTCCTTGATGATCATATTCTTGGCCACCGTCTACTTCATGTC
CAAGCCTCGTTCTGTCTACCTAGTCGACTATGCTTGCTTCAAACCCCCAGCCTCATATCG
CGTTCCCCATGCTACCCTCGTGAAACACTTGAGGCTCAGCAACAAGGATAATCCTGAGAT
TGTTGAGTTCCAAAGGCGAATTCTTCAGAGGTCTGGTCTAGGAGATGAGACGTGTTTGGC
TCCTGCAAATCTATATATTCCTCCAACACCCAGCTTGGAGGCTTCAAGGGCTGAAGCGGA
GCTTATTCTCTTCTCTGTTATTGATGATTTGTTGAAGAAAACCGGGACTAAGACCAAGGA
CATCGATATTCTTATTGTGAATTGCAGTATAGTTTCACCTACTCCATCACTGTCTGCTAT
GGTGATTAACAAGTACAAATTGAGGAGTAACATAAAGAGCTTCAATCTTTCTGGTATGGG
GTGCAGTGCTAGCCTTATATCAATTGATTTAGCTAGGGAACTTCTTCAGGTTCATCCCAA
TTCATGTGCTATAGTGGTCAGCACTGAGATCACCACTCCCAATTATTATAGCGGCAACGA
GAGATCAATGGTTCTTATAAACTGTTTGTTCCGAATGGGTGGTGCAGCCATCCTTTTGTC
CAACAAAAAAGCAGACAGGAGTCGATCCAAGTACCAATTACTCCATCTTGTTAGAACTCA
CAAGGGAGCTGATGATAAGGCTTACCGGTGTATCCATGAACAAGAAGACACACAAGGGAT
ACAAGGGGTTTCACTCTCTAAAGACCTGATGTTGATTGCTGGGGAGGCCTTGAAGTCCAA
CATAACCACAATTGGACCCCTTGTGTTGCCTGCTTCCGAGCAGCTCAACTTCCTGTTCAC
ACTCATCGGCCAAAAAATACTGAAACTTAAGTGGAAGCCATACATTCCTGACTTCAAGCA
GGCATTTGAGCACTTCTGCATCCATGCGGGCGGGCGAGGGGTGATCGATGAGCTGCAGAA
GAAGCTGCAGTTATCGGCTAAGGACGTGGAGGCGTCCAGGATGACGCTGCACCGCTTTGG
CAACACTTCATCTTCTTCCATTTGGTATGAGATGAACTATATCGAGAGTAAAGGGAGGAT
GAAAAAAGGTGACCGGATTTGGCAGATTGCCTTCGGAAGTGGATTCAAGTGTAACAGTGC
AGTTTGGAAGTGCAACCGCACAATCACGACGCCAACCGATGGGCCTTGGCTTGACTGCAT
TGGTAGGTATCCGGTGTCCATCTCACAGGTCCTGGACCTCTGATT