Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g01780.t01
CDS Infomation

cds chromosome:12X:19:7815600:7820412:-1 gene:VIT_19s0090g01780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTTTCTGAGTCCACAGCAGTTGTTTTCAATAGAATTCAAAAACTAGAACCAGAG
AATGTTTCAAAGATTATAGGGTATCTTCTTGTTAAGGGTTTTAGTAAGGGAGAAATGATT
CGGTTGGCTTTTGGTCCCGATAAGGCGATTCGTATGATAATTGAAGGGGTCAAAATAGAG
CTTGGTTTGATTCCAAATCCACCATCTCCAATCTCTCCTCACTTCCCTCCTCTCTCTCCT
TCAACTGGTTCTTGGTTCCCTTCATCTTCTCCGTCTCCCGTGAACCGATATCTCCAACAT
GCTACAGAGCAACTACCAAAAGATTATAGTCTCCAAAGTCAGCCTTTGGGTTTAGAGGAA
CAGTTAGAACAGGTCAACCCAGCAATTTTAGGAGTTTCCGGTGATTACTATTACCCGGAG
ACGGCAGTGGAAAATTTGAGTGTGAGGACGGGTCCAAGATCTCTGATTGGTTCGGAATTT
CCAGTTAAGGTTTGTCACTATTTCAACAAGGGGTTTTGTAAGCATGGAAATAATTGTCGA
TACTTGCATGCACAAGTCTTTCCTGAGGTTTTAAGCCCTATTGCAAATGATCTTGCTAAT
GATGATCATATTTTCTCACCTGGTTCAATCGAGAAGTTGGAATTGGAGTTAACAGAGCTC
CTGAAATCAAGAAGAGGCAATCCTGTCTCCATTGCCTCTCTGCCTATGATGTATTATGAG
AGATATGGTAGGGGTCTTCAGGCTGAAGGGTACCTCACTGAGAGCCAACGACATGGGAAA
GCTGGTTATAGTTTGACAAAGCTTCTTGCTCGGTTGAGAACCATTCGACTAATTGACAGG
CCTCATGGGCAGCATTCAGTAATTTTGGCAGAAGACGTGCCAAAATACATGGAAAGCCGG
AGTGAGAGGAGTGACCCTGGTCCAATTGTAAGTGGTTCCCGGCAGATATATCTGACATTT
CCAGCTGAGAGTACTTTTACTGAAGAAGATGTCTCTGACTACTTCAGCACCTTTGGACTG
GTTGAGGATGTGAGGATTCCCTGCCAGCAGAAACGGATGTTTGGGTTTGTAACCTTTGAC
AGTTCTGATACCGTGAAGAGCATTTTGGCCAAGGGAAGTCCACATTATGTTTGTGGGGCT
CGTGTTCTTGTGAAACCTTACAGAGAAAAGCCAAGGACTGGTGATAGGAAATATTTAGAG
AAATTTGAGTCTTCAATGTATTATCCTTTGCAATATGCAGACATGGATTCCGAGCTTCAC
ATGATGCCTAGAGGAATGGAGACCTCAAGATTGCTCAGAAAGCAGATTATGGAAGAGCAA
GAGTTTGCACAGGATCTTGAATTTGAGACAAGGCGTCTCTCCAAGCTGCAGCTAGCACGA
AATCCTCTGGCCAATCAGCTCCACCATGGCTATTCCTTGGATGAACTAAAAGTCTTGGAA
GCACATGCAAATCATTCCAAGTTCCCGACTGTTGTCCATTCCAATTATCCATTGGATGTT
TCAAACAATGGCTCTACAAGTGATGATAAGCCATGGCGTGCAGTCAACAACCCCATCGAT
CATAAGAGTTCAGGTCTTGAACTCCCGGATAGCCCATTTGCATTTCCGATAGGAAGCAGC
ATTTCTACAATATAG

Peptide Sequence

PEP ID

VIT_19s0090g01780.t01
PEP Infomation

pep chromosome:12X:19:7815600:7820412:-1 gene:VIT_19s0090g01780 transcript:VIT_19s0090g01780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE
LGLIPNPPSPISPHFPPLSPSTGSWFPSSSPSPVNRYLQHATEQLPKDYSLQSQPLGLEE
QLEQVNPAILGVSGDYYYPETAVENLSVRTGPRSLIGSEFPVKVCHYFNKGFCKHGNNCR
YLHAQVFPEVLSPIANDLANDDHIFSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYE
RYGRGLQAEGYLTESQRHGKAGYSLTKLLARLRTIRLIDRPHGQHSVILAEDVPKYMESR
SERSDPGPIVSGSRQIYLTFPAESTFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFD
SSDTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELH
MMPRGMETSRLLRKQIMEEQEFAQDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLE
AHANHSKFPTVVHSNYPLDVSNNGSTSDDKPWRAVNNPIDHKSSGLELPDSPFAFPIGSS
ISTI

Transcript Sequence

Transcript ID

VIT_19s0090g01780.t01
Transcript Infomation

cdna chromosome:12X:19:7815600:7820412:-1 gene:VIT_19s0090g01780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACATGAGAGGGGGATTTAATGGAGTCAAAGCATTAATCATGTTGTTTGAATATTTGGA
TTAGTTTTCTCTTCACAGTGTGTGGTGTGACTTGATATATATTCTAGATGTGACATGGAT
TTTTCTGAGTCCACAGCAGTTGTTTTCAATAGAATTCAAAAACTAGAACCAGAGAATGTT
TCAAAGATTATAGGGTATCTTCTTGTTAAGGGTTTTAGTAAGGGAGAAATGATTCGGTTG
GCTTTTGGTCCCGATAAGGCGATTCGTATGATAATTGAAGGGGTCAAAATAGAGCTTGGT
TTGATTCCAAATCCACCATCTCCAATCTCTCCTCACTTCCCTCCTCTCTCTCCTTCAACT
GGTTCTTGGTTCCCTTCATCTTCTCCGTCTCCCGTGAACCGATATCTCCAACATGCTACA
GAGCAACTACCAAAAGATTATAGTCTCCAAAGTCAGCCTTTGGGTTTAGAGGAACAGTTA
GAACAGGTCAACCCAGCAATTTTAGGAGTTTCCGGTGATTACTATTACCCGGAGACGGCA
GTGGAAAATTTGAGTGTGAGGACGGGTCCAAGATCTCTGATTGGTTCGGAATTTCCAGTT
AAGGTTTGTCACTATTTCAACAAGGGGTTTTGTAAGCATGGAAATAATTGTCGATACTTG
CATGCACAAGTCTTTCCTGAGGTTTTAAGCCCTATTGCAAATGATCTTGCTAATGATGAT
CATATTTTCTCACCTGGTTCAATCGAGAAGTTGGAATTGGAGTTAACAGAGCTCCTGAAA
TCAAGAAGAGGCAATCCTGTCTCCATTGCCTCTCTGCCTATGATGTATTATGAGAGATAT
GGTAGGGGTCTTCAGGCTGAAGGGTACCTCACTGAGAGCCAACGACATGGGAAAGCTGGT
TATAGTTTGACAAAGCTTCTTGCTCGGTTGAGAACCATTCGACTAATTGACAGGCCTCAT
GGGCAGCATTCAGTAATTTTGGCAGAAGACGTGCCAAAATACATGGAAAGCCGGAGTGAG
AGGAGTGACCCTGGTCCAATTGTAAGTGGTTCCCGGCAGATATATCTGACATTTCCAGCT
GAGAGTACTTTTACTGAAGAAGATGTCTCTGACTACTTCAGCACCTTTGGACTGGTTGAG
GATGTGAGGATTCCCTGCCAGCAGAAACGGATGTTTGGGTTTGTAACCTTTGACAGTTCT
GATACCGTGAAGAGCATTTTGGCCAAGGGAAGTCCACATTATGTTTGTGGGGCTCGTGTT
CTTGTGAAACCTTACAGAGAAAAGCCAAGGACTGGTGATAGGAAATATTTAGAGAAATTT
GAGTCTTCAATGTATTATCCTTTGCAATATGCAGACATGGATTCCGAGCTTCACATGATG
CCTAGAGGAATGGAGACCTCAAGATTGCTCAGAAAGCAGATTATGGAAGAGCAAGAGTTT
GCACAGGATCTTGAATTTGAGACAAGGCGTCTCTCCAAGCTGCAGCTAGCACGAAATCCT
CTGGCCAATCAGCTCCACCATGGCTATTCCTTGGATGAACTAAAAGTCTTGGAAGCACAT
GCAAATCATTCCAAGTTCCCGACTGTTGTCCATTCCAATTATCCATTGGATGTTTCAAAC
AATGGCTCTACAAGTGATGATAAGCCATGGCGTGCAGTCAACAACCCCATCGATCATAAG
AGTTCAGGTCTTGAACTCCCGGATAGCCCATTTGCATTTCCGATAGGAAGCAGCATTTCT
ACAATATAGCAAGCAGCATTTCTACAGTCACATAGGTTCAGCAACACACAGATGAATGAT
AGGAGTATAAAACAGATAGGTTTCAAAGGCAGCATCATCGGTTTGATACAGAACAGCTTC
TTCCTACACTTTCTCCCCTTACAATTCATGGATAAATGGATCAAAGTTCCCTGCAAGTAT
ATACCGACAGAAGAAGAAACACTGCAAACATCTCCTCGTTGTTATCCAGGTAATGAATGA
GGCATAGCTAGTAAAGAAGAAAATGATACACAAAATCTGCATGTAAGAAAGTTGTTTCAG
TTTTTTTAATGTTAATCACAGAAGAAATGAGGTCTGGATCTATAGGAGAGGGTGTAATAT
AGTTTTCTACTAAAAGAAAGAAACTAGAGTATATGCGGGGTCTTTAGAGGTAAATACATG
TCTATAATTTATGTAACACCGAACCATAAAAGGCTTCAAGCAAAGTTAGCATCCCATACC
AATTTATGAGAA