Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g01540.t01
CDS Infomation

cds chromosome:12X:19:7636020:7640679:1 gene:VIT_19s0090g01540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAACAGAAAGAAGCTCAAGATCCTGCTCTCTCTCTTCGCTTTCAACTCCATCTATCTC
TACTTCTTCTCCTCCTCCGACCACCACCTCTTCATCCACCATAAACTCCTCCCCGGAAAC
CACAAGGCGTCCCCGGCGAACCCCAAAACTCCGCCGGGAAAACACCCTCATTTCCCTATC
ACCCCCCGCGCCAAGCCATGGCCAATTCTCCCGTCTTACCTTCCGTGGTCGCTGAACCCC
ACCGTGGCTCTTCGTTCCTGCGAGGGTTACTTCGGGAACGGCTTCACGCGCCGAATCGGC
CTTCGACGTTCTTCGGTGGAAAGGGAATCGGGGATCTCCGGCGGGGGCGGGTGGTTCAGG
TGCTGGCACAGCGGGACGTTGCAGAGTTCGGTGTGTGAGGGAGGGAGGGTGAGGATGACG
CCGGAGAGGATTCAGATGTCGATCGGAGGGGAGAGGTTGGAGAATGTGATTGGGAGGAAG
GAGGAGGAGGAGTTGCCGGAGTTTGAGGCCGGAGCCTTTGAGGTTGATGCTGGGGAACGG
TTTGGCGATCAGAGGAAGCTTGTGGATGAAGAGTTTCTGAATCGATTTGTGCCGCAGGGT
GCGATTTCACGGCATACTATGCGTGGCTTGCTTGATTCGATTCGATTGGTTGGATCCAGT
GAGTTCAAGTGCGATCAGTGGATCGAGGAACCAACACTTCTAGTCACACGCTTTGAGTAT
GCAAACCTTTTTCACACATTTACAGATTGGTACAGTGCATATGTTGCTTCTAGAGTGACA
GGCTTACCCAATCGACCTCATTTGGTTTTTATAGATGGCCACTGTAGGGCACCTTTAGAA
GAAACATGGAAAGCGCTGTTTTCAAGTCTTAAATACGCTAAAAACTTTAGTGGTTCAGTT
TGTTTTCGTCATGCAGTTCTCGTGCCTTTGGGATATGAGACTGCTTTATTTAAGGGGCTG
TCTGAAAATATAAATTGTCATGGAGCATTTGCACATGATCTGTGGCAAAACCCTGATGAC
CTGAAAACTGCACGATTATCTGAGTTTGGAGAAATGATAAGAGCAGCTTTTGGGTTTCCA
GTTGGAAGACACCGTGTTCTGAAGCCTGCCTCTGGTCACAATATCCTCTTTGTTAGGCGA
GAAGATTATGTAGCTCACCCACGTCATGGTGGTAAGGTTGAATCAAGACTTAGCAATGAA
CAGGAGGTGTTTGATTCTCTAAAGAACTGGGCATCTAATTATTTGGAATGCAAAATAAAC
CTTGTCGATGGATTATTTGCTCACATGCCAATGAAAGAGCAAGTTCGAGCCATCCAAGAT
GCTTCAGTCATCATTGGTGCTCATGGGGCAGGTCTAACTCACATAATATCTGCAAGACCA
AAAACGGTGATCCTTGAAATTATTAGCAGCCTATACAGGCGCCCGCATTTTGCATTGATT
TCCCAGTGGAAAGGCTTGGAGTATCATGCCATTAATCTTGATGGATCATATGCTGATCCT
AGAGTGGTTATTGATCAGCTTAACAGCATAGTGAAAAGCCTTGGATGCTGA

Peptide Sequence

PEP ID

VIT_19s0090g01540.t01
PEP Infomation

pep chromosome:12X:19:7636020:7640679:1 gene:VIT_19s0090g01540 transcript:VIT_19s0090g01540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNRKKLKILLSLFAFNSIYLYFFSSSDHHLFIHHKLLPGNHKASPANPKTPPGKHPHFPI
TPRAKPWPILPSYLPWSLNPTVALRSCEGYFGNGFTRRIGLRRSSVERESGISGGGGWFR
CWHSGTLQSSVCEGGRVRMTPERIQMSIGGERLENVIGRKEEEELPEFEAGAFEVDAGER
FGDQRKLVDEEFLNRFVPQGAISRHTMRGLLDSIRLVGSSEFKCDQWIEEPTLLVTRFEY
ANLFHTFTDWYSAYVASRVTGLPNRPHLVFIDGHCRAPLEETWKALFSSLKYAKNFSGSV
CFRHAVLVPLGYETALFKGLSENINCHGAFAHDLWQNPDDLKTARLSEFGEMIRAAFGFP
VGRHRVLKPASGHNILFVRREDYVAHPRHGGKVESRLSNEQEVFDSLKNWASNYLECKIN
LVDGLFAHMPMKEQVRAIQDASVIIGAHGAGLTHIISARPKTVILEIISSLYRRPHFALI
SQWKGLEYHAINLDGSYADPRVVIDQLNSIVKSLGC

Transcript Sequence

Transcript ID

VIT_19s0090g01540.t01
Transcript Infomation

cdna chromosome:12X:19:7636020:7640679:1 gene:VIT_19s0090g01540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGATAGAGAGAGAGAGAGTGAGCATGAACAGAAAGAAGCTCAAGATCCTGCTCTCTCTCT
TCGCTTTCAACTCCATCTATCTCTACTTCTTCTCCTCCTCCGACCACCACCTCTTCATCC
ACCATAAACTCCTCCCCGGAAACCACAAGGCGTCCCCGGCGAACCCCAAAACTCCGCCGG
GAAAACACCCTCATTTCCCTATCACCCCCCGCGCCAAGCCATGGCCAATTCTCCCGTCTT
ACCTTCCGTGGTCGCTGAACCCCACCGTGGCTCTTCGTTCCTGCGAGGGTTACTTCGGGA
ACGGCTTCACGCGCCGAATCGGCCTTCGACGTTCTTCGGTGGAAAGGGAATCGGGGATCT
CCGGCGGGGGCGGGTGGTTCAGGTGCTGGCACAGCGGGACGTTGCAGAGTTCGGTGTGTG
AGGGAGGGAGGGTGAGGATGACGCCGGAGAGGATTCAGATGTCGATCGGAGGGGAGAGGT
TGGAGAATGTGATTGGGAGGAAGGAGGAGGAGGAGTTGCCGGAGTTTGAGGCCGGAGCCT
TTGAGGTTGATGCTGGGGAACGGTTTGGCGATCAGAGGAAGCTTGTGGATGAAGAGTTTC
TGAATCGATTTGTGCCGCAGGGTGCGATTTCACGGCATACTATGCGTGGCTTGCTTGATT
CGATTCGATTGGTTGGATCCAGTGAGTTCAAGTGCGATCAGTGGATCGAGGAACCAACAC
TTCTAGTCACACGCTTTGAGTATGCAAACCTTTTTCACACATTTACAGATTGGTACAGTG
CATATGTTGCTTCTAGAGTGACAGGCTTACCCAATCGACCTCATTTGGTTTTTATAGATG
GCCACTGTAGGGCACCTTTAGAAGAAACATGGAAAGCGCTGTTTTCAAGTCTTAAATACG
CTAAAAACTTTAGTGGTTCAGTTTGTTTTCGTCATGCAGTTCTCGTGCCTTTGGGATATG
AGACTGCTTTATTTAAGGGGCTGTCTGAAAATATAAATTGTCATGGAGCATTTGCACATG
ATCTGTGGCAAAACCCTGATGACCTGAAAACTGCACGATTATCTGAGTTTGGAGAAATGA
TAAGAGCAGCTTTTGGGTTTCCAGTTGGAAGACACCGTGTTCTGAAGCCTGCCTCTGGTC
ACAATATCCTCTTTGTTAGGCGAGAAGATTATGTAGCTCACCCACGTCATGGTGGTAAGG
TTGAATCAAGACTTAGCAATGAACAGGAGGTGTTTGATTCTCTAAAGAACTGGGCATCTA
ATTATTTGGAATGCAAAATAAACCTTGTCGATGGATTATTTGCTCACATGCCAATGAAAG
AGCAAGTTCGAGCCATCCAAGATGCTTCAGTCATCATTGGTGCTCATGGGGCAGGTCTAA
CTCACATAATATCTGCAAGACCAAAAACGGTGATCCTTGAAATTATTAGCAGCCTATACA
GGCGCCCGCATTTTGCATTGATTTCCCAGTGGAAAGGCTTGGAGTATCATGCCATTAATC
TTGATGGATCATATGCTGATCCTAGAGTGGTTATTGATCAGCTTAACAGCATAGTGAAAA
GCCTTGGATGCTGAAAATTTTATGGTTTCTTCAGGAAATGGATTCATCCCTCTTTGCTGG
GAAGTACAAGGACAAAGAGAAGTCCACCCCATGTTTTGTATCTCAGTTTTTGAAGTCTAT
TGTTTGGCGTGCCATATTCTCTTTTTGTACAGTTTTGGCTTTTCCCACTGCTGCCATTCT
GCAGTGTTCAAATGGATATTTCATTGAAGAAAAGAAACTATAGTTTCTTTAATGGGGATT
TTTATCATTCCAAGGGTTTGCTCCAACTGATGATCCATTGAAGACGGGTTGCCAAAACAT
AGGGGCCTTGGCTGCTCTTTTTGCAGCACATCTCTAGCAATTCAGTGGAAGATTTTCAGG
GAAAGGTGGATAGAATAATTACTTCGGAATTATTTGGTGTCCATAGAGAGAATGCCTGAT
ATGCTGTCTTTGCACCTTTCATATTGTTCATTTCAAGTATTTAGTGTCTCTAGGAGGGGG
ATGTAGGCTACCTTTTGATTTTGCTTGGAAGCCAATTCTTTATTTATTTACACAACCACC
TTCTTGTACAATAGACTGATTCACCAGTTGATTTCAATTTGGTGGGATTCTATTCAATAC
AGATCAGAGAGACTTCTTG