Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g01310.t01
CDS Infomation

cds chromosome:12X:19:7379075:7386285:1 gene:VIT_19s0090g01310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCATAGTGCCCAAAGAGACAATTGAGGTCATTGCACAAAGTATAGGAATTTCAAAT
TTCTCGCCCGATGTTGCTCCGGCTCTTGCAACCGATGTTGAGTACCGGGTGCGCGAAATC
ATGCAGGAGGCAATCAAATGCATGCGCCACTCAAAGAGGACTATCTTGACAGTAAATGAT
GTGGATAGTGCACTCAAGCTAAGAAATGTGGAGCCACTTTATGGCTTCACCTCTGGAGGT
CCTAGGCAGTTTAAAAGAGCTGCTGGACATAAAGATTTGTTCTATGTTGATGACAAGGAT
GTAGAATTTAAAGACTTGATTGAAGCACCCTTACCAAAAACACCTCTAGATACTGGAGTT
ATCACTCACTGGCTAGCTATTGAAGGAGTGCAACCTGCAATTTCTGAAAATGCTCCAATT
GAAGCACTTGCTGTGCCTTCTGACAACAAAAAATCTGAATACAAAGAGGATGGGCTTCCT
GTGGACACCAAATTACCTGTTAAGCATGTACTTTCAAGGGAGCTTCAGCTTTACTTTGAC
AAAATCAAAGAGCTTACCCTGAGTAGATCTGATTCTATCCTATTTAAAGAAGCATTAGTG
AGCTTGGCAACAGACTCAGGAATTCATCCTTTAGTTCCTTATTTTACATATTTCATTGCT
GATGAGGTCACACGGAATTTGAATGATTTCTCTATCCTGTTTGCTTTGATGCGTGTTGCC
CGTAGCCTTCTCCAAAACCAGCAAATACACATAGAACCTTATCTACACCAATTGATGCCA
TCTATTATTACTTGCCTTGTTGCGAAAAGGTTGGGGAGTAGATTCTCTGACAACCACTGG
GAGCTTAGAAGCTTCACAGCTAACCTGGTCGCTTCAGTATGCAAGAGATATGGGCATGTT
TATCATAACCTCCAGCCACGTGTGACAAGGACTCTGCTCCATGCTTTCTTGGACCCAACA
AAAGCATTGCCTCAACATTATGGGGCAATTCAGGGGTTGGCAGCATTTGGACCCAGTGTG
GTTCGCTTGCTTATACTGCCTAATCTTGAGCCATACTTGCGACTTCTTGAGCCAGAAATG
CAGCTTGAGAAGCAAAAGAATGGGATGAAGAGACATGAAGCCTGGCGTGTATATGGAGCC
TTACTGTGTGCTGCTGGTACATGCATGTATGATCGGCTGAAGACATTCCCCAATTTGCTA
TCTCCGCCAACACGGGCCATCTTGAAGAGCAATAAAAAAATCTTGCCTACAAAACCAAGC
AAACGCAAAGCAAGCACAGATAACTTAATGCAACAGCCACCGCTCAAGAAATTAGCAACA
GATGGCTCAATGGGCGTTATGCCAATTAACTCCCTGGCAGTTGACAAGCAAGGGTTAACA
GGAGGATTTTCTACTTCAACTGCTGTAGGAAGTTCTGATGTTGGTCTGTCATCAATGTCC
CAGCAGTTAGCTAGTGAGAACATATCAGGAGGTAGAAGAGAGGTCGGTACTCGAGCCCTA
AAAGCATCAGCTGTTCTTGCTCAGGCTTGGAAGGATGTCAATGCTGGGCAATTGTCGGCG
TCATTGTTTGAATATTTTGGTGAAAGTATGTTTTGCTTCACTCCCTCACCTGAGTTATAA

Peptide Sequence

PEP ID

VIT_19s0090g01310.t01
PEP Infomation

pep chromosome:12X:19:7379075:7386285:1 gene:VIT_19s0090g01310 transcript:VIT_19s0090g01310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSIVPKETIEVIAQSIGISNFSPDVAPALATDVEYRVREIMQEAIKCMRHSKRTILTVND
VDSALKLRNVEPLYGFTSGGPRQFKRAAGHKDLFYVDDKDVEFKDLIEAPLPKTPLDTGV
ITHWLAIEGVQPAISENAPIEALAVPSDNKKSEYKEDGLPVDTKLPVKHVLSRELQLYFD
KIKELTLSRSDSILFKEALVSLATDSGIHPLVPYFTYFIADEVTRNLNDFSILFALMRVA
RSLLQNQQIHIEPYLHQLMPSIITCLVAKRLGSRFSDNHWELRSFTANLVASVCKRYGHV
YHNLQPRVTRTLLHAFLDPTKALPQHYGAIQGLAAFGPSVVRLLILPNLEPYLRLLEPEM
QLEKQKNGMKRHEAWRVYGALLCAAGTCMYDRLKTFPNLLSPPTRAILKSNKKILPTKPS
KRKASTDNLMQQPPLKKLATDGSMGVMPINSLAVDKQGLTGGFSTSTAVGSSDVGLSSMS
QQLASENISGGRREVGTRALKASAVLAQAWKDVNAGQLSASLFEYFGESMFCFTPSPEL

Transcript Sequence

Transcript ID

VIT_19s0090g01310.t01
Transcript Infomation

cdna chromosome:12X:19:7379075:7386285:1 gene:VIT_19s0090g01310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAATTGAAAGATGAGCATAGTGCCCAAAGAGACAATTGAGGTCATTGCACAAAGTATAG
GAATTTCAAATTTCTCGCCCGATGTTGCTCCGGCTCTTGCAACCGATGTTGAGTACCGGG
TGCGCGAAATCATGCAGGAGGCAATCAAATGCATGCGCCACTCAAAGAGGACTATCTTGA
CAGTAAATGATGTGGATAGTGCACTCAAGCTAAGAAATGTGGAGCCACTTTATGGCTTCA
CCTCTGGAGGTCCTAGGCAGTTTAAAAGAGCTGCTGGACATAAAGATTTGTTCTATGTTG
ATGACAAGGATGTAGAATTTAAAGACTTGATTGAAGCACCCTTACCAAAAACACCTCTAG
ATACTGGAGTTATCACTCACTGGCTAGCTATTGAAGGAGTGCAACCTGCAATTTCTGAAA
ATGCTCCAATTGAAGCACTTGCTGTGCCTTCTGACAACAAAAAATCTGAATACAAAGAGG
ATGGGCTTCCTGTGGACACCAAATTACCTGTTAAGCATGTACTTTCAAGGGAGCTTCAGC
TTTACTTTGACAAAATCAAAGAGCTTACCCTGAGTAGATCTGATTCTATCCTATTTAAAG
AAGCATTAGTGAGCTTGGCAACAGACTCAGGAATTCATCCTTTAGTTCCTTATTTTACAT
ATTTCATTGCTGATGAGGTCACACGGAATTTGAATGATTTCTCTATCCTGTTTGCTTTGA
TGCGTGTTGCCCGTAGCCTTCTCCAAAACCAGCAAATACACATAGAACCTTATCTACACC
AATTGATGCCATCTATTATTACTTGCCTTGTTGCGAAAAGGTTGGGGAGTAGATTCTCTG
ACAACCACTGGGAGCTTAGAAGCTTCACAGCTAACCTGGTCGCTTCAGTATGCAAGAGAT
ATGGGCATGTTTATCATAACCTCCAGCCACGTGTGACAAGGACTCTGCTCCATGCTTTCT
TGGACCCAACAAAAGCATTGCCTCAACATTATGGGGCAATTCAGGGGTTGGCAGCATTTG
GACCCAGTGTGGTTCGCTTGCTTATACTGCCTAATCTTGAGCCATACTTGCGACTTCTTG
AGCCAGAAATGCAGCTTGAGAAGCAAAAGAATGGGATGAAGAGACATGAAGCCTGGCGTG
TATATGGAGCCTTACTGTGTGCTGCTGGTACATGCATGTATGATCGGCTGAAGACATTCC
CCAATTTGCTATCTCCGCCAACACGGGCCATCTTGAAGAGCAATAAAAAAATCTTGCCTA
CAAAACCAAGCAAACGCAAAGCAAGCACAGATAACTTAATGCAACAGCCACCGCTCAAGA
AATTAGCAACAGATGGCTCAATGGGCGTTATGCCAATTAACTCCCTGGCAGTTGACAAGC
AAGGGTTAACAGGAGGATTTTCTACTTCAACTGCTGTAGGAAGTTCTGATGTTGGTCTGT
CATCAATGTCCCAGCAGTTAGCTAGTGAGAACATATCAGGAGGTAGAAGAGAGGTCGGTA
CTCGAGCCCTAAAAGCATCAGCTGTTCTTGCTCAGGCTTGGAAGGATGTCAATGCTGGGC
AATTGTCGGCGTCATTGTTTGAATATTTTGGTGAAAGTATGTTTTGCTTCACTCCCTCAC
CTGAGTTATAAGCAACCACTCATATAAATACTACAAAAGACAAATAAGAGAAGCAAATGC
TACAAACCACAAAGGAAATGGCATCTAATGCAGACGAGCATCAAGATCATTACACGATCA
CATGGTACTTGAGAAAAAGGGGGAAAAGG