Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g01280.t01
CDS Infomation

cds chromosome:12X:19:7342484:7347741:-1 gene:VIT_19s0090g01280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCTCTCCTCAAATCTTATGGCGCCAGCTGCTTTCTTCATTGTGTTAGCCCTTTTT
TCTGTTCCTACGGATGCCCAAATTAAATCCGATGAAGGATTCATTTCTGTGTTCATATCC
AGTAAGGGGCTTGGTTTTGTCAAGGATTTGTTAATGCACAAAGCTGTTTCCTCTCTCACC
CCAATCGAAATACAGCCTATCGAAAAGATTGTGAAGATCCCACTTGTTGGCCAAGTTGAC
ATTCTTCTTTCCAACATCACTATCCTTAGTGTGGGTGTGGGTACTTCATATGTTAGTTCG
GGAGGGGCTGGTGTGGTTATAGTTGCTTCCGGTGGTACTGCCAATATGAGTATGAATTGG
AAGTATTCTTATGATACTTGGTTGTTTCCAATTTCAGATAAAGGTGCTGCCTCGGTTCTG
GTTGAAGGCATGGCCATGGAGCTTACTCTAGGATTGAAGGACCAGAATGGAACTCTAAGT
CTGTCTCTCTTGGACTGGGGATGTTTCGTGAAAGATATCTTTGTGAAGTTGGATGGTGGG
GCAACTTGGTTTTATCAAGGGCTGGTGGATGCTTTCAAAGAGCAAATAGCCTCTGCAGTT
GAAGATTCTGTTTCCAAAAGAATAAGAGAGGGAATTATAAAGCTTGATTCCTTATTACAA
TCTGTTCCAAAAGAAATACCAGTAGATCATGTTGCTGCTCTGAATGTTACTTTTGTGAAG
GACCCTGTATCAAGTAATTCTTCCATTGACTTTGAGATTAACGGGTTATTCACAGCAAAG
GATGGCATTCCAGCTCCCACCAATTACCATAAAAAACATCGAGCTCCCGTTTCCTGCACA
GGTCCAGCCAAGATGATTGAGATGTCATTAGATGAAAATGTTTTTAACTCTGCAACTTCT
GTTTACTTCAAAGCAGATTTTATGAGCTGGATTGTTAACAAAATGCCAGATCAGTCTCTT
TTGAACACAGCCGGATGGAAATATATTGTTCCTCAACTCTACAATCAGTACCCAGATGAT
GGTGTGAACCTGAATATTTCTGTATCTTCTCAACCAATGTTAAAAATTGCAGACGATAAA
GTTGATACAACCATTTACTCAGATATGATAATTGATGTTTTGGATTCTGGTGAAGTAATT
CAAGTGGCGTGCATCTCATTGGTTATTAATGCTACTGGCTCTATACAAATTTCAAAGAAC
AACCTCACTGGTAGCTTTGGGTTGACTGAATTTACTATGTCCTTGAAATGGAGTAACATT
GGTGACTTGGACATGCACCAAGTTCAGGCAGCAATGTCAACTGTCATTGACACAGTCTTC
TTGCCATATTTGAACTTGCACCTGGCAAAGGGATTTCCTTTGCCAGTTCTTCCTGGTTTT
ACACTTGAGAATGCTGAAATCATATGCAGAAATTCACAAGTTATGGTTTGCAGTGATGTG
GTCCACACAGGAGAATATGATCTCTATAAGCTACTGCCACTATGGGTAAATATGCTGTCC
ATTTAG

Peptide Sequence

PEP ID

VIT_19s0090g01280.t01
PEP Infomation

pep chromosome:12X:19:7342484:7347741:-1 gene:VIT_19s0090g01280 transcript:VIT_19s0090g01280.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGLSSNLMAPAAFFIVLALFSVPTDAQIKSDEGFISVFISSKGLGFVKDLLMHKAVSSLT
PIEIQPIEKIVKIPLVGQVDILLSNITILSVGVGTSYVSSGGAGVVIVASGGTANMSMNW
KYSYDTWLFPISDKGAASVLVEGMAMELTLGLKDQNGTLSLSLLDWGCFVKDIFVKLDGG
ATWFYQGLVDAFKEQIASAVEDSVSKRIREGIIKLDSLLQSVPKEIPVDHVAALNVTFVK
DPVSSNSSIDFEINGLFTAKDGIPAPTNYHKKHRAPVSCTGPAKMIEMSLDENVFNSATS
VYFKADFMSWIVNKMPDQSLLNTAGWKYIVPQLYNQYPDDGVNLNISVSSQPMLKIADDK
VDTTIYSDMIIDVLDSGEVIQVACISLVINATGSIQISKNNLTGSFGLTEFTMSLKWSNI
GDLDMHQVQAAMSTVIDTVFLPYLNLHLAKGFPLPVLPGFTLENAEIICRNSQVMVCSDV
VHTGEYDLYKLLPLWVNMLSI

Transcript Sequence

Transcript ID

VIT_19s0090g01280.t01
Transcript Infomation

cdna chromosome:12X:19:7342484:7347741:-1 gene:VIT_19s0090g01280 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTCTGATATGGGTCTCTCCTCAAATCTTATGGCGCCAGCTGCTTTCTTCATTGTGTTA
GCCCTTTTTTCTGTTCCTACGGATGCCCAAATTAAATCCGATGAAGGATTCATTTCTGTG
TTCATATCCAGTAAGGGGCTTGGTTTTGTCAAGGATTTGTTAATGCACAAAGCTGTTTCC
TCTCTCACCCCAATCGAAATACAGCCTATCGAAAAGATTGTGAAGATCCCACTTGTTGGC
CAAGTTGACATTCTTCTTTCCAACATCACTATCCTTAGTGTGGGTGTGGGTACTTCATAT
GTTAGTTCGGGAGGGGCTGGTGTGGTTATAGTTGCTTCCGGTGGTACTGCCAATATGAGT
ATGAATTGGAAGTATTCTTATGATACTTGGTTGTTTCCAATTTCAGATAAAGGTGCTGCC
TCGGTTCTGGTTGAAGGCATGGCCATGGAGCTTACTCTAGGATTGAAGGACCAGAATGGA
ACTCTAAGTCTGTCTCTCTTGGACTGGGGATGTTTCGTGAAAGATATCTTTGTGAAGTTG
GATGGTGGGGCAACTTGGTTTTATCAAGGGCTGGTGGATGCTTTCAAAGAGCAAATAGCC
TCTGCAGTTGAAGATTCTGTTTCCAAAAGAATAAGAGAGGGAATTATAAAGCTTGATTCC
TTATTACAATCTGTTCCAAAAGAAATACCAGTAGATCATGTTGCTGCTCTGAATGTTACT
TTTGTGAAGGACCCTGTATCAAGTAATTCTTCCATTGACTTTGAGATTAACGGGTTATTC
ACAGCAAAGGATGGCATTCCAGCTCCCACCAATTACCATAAAAAACATCGAGCTCCCGTT
TCCTGCACAGGTCCAGCCAAGATGATTGAGATGTCATTAGATGAAAATGTTTTTAACTCT
GCAACTTCTGTTTACTTCAAAGCAGATTTTATGAGCTGGATTGTTAACAAAATGCCAGAT
CAGTCTCTTTTGAACACAGCCGGATGGAAATATATTGTTCCTCAACTCTACAATCAGTAC
CCAGATGATGGTGTGAACCTGAATATTTCTGTATCTTCTCAACCAATGTTAAAAATTGCA
GACGATAAAGTTGATACAACCATTTACTCAGATATGATAATTGATGTTTTGGATTCTGGT
GAAGTAATTCAAGTGGCGTGCATCTCATTGGTTATTAATGCTACTGGCTCTATACAAATT
TCAAAGAACAACCTCACTGGTAGCTTTGGGTTGACTGAATTTACTATGTCCTTGAAATGG
AGTAACATTGGTGACTTGGACATGCACCAAGTTCAGGCAGCAATGTCAACTGTCATTGAC
ACAGTCTTCTTGCCATATTTGAACTTGCACCTGGCAAAGGGATTTCCTTTGCCAGTTCTT
CCTGGTTTTACACTTGAGAATGCTGAAATCATATGCAGAAATTCACAAGTTATGGTTTGC
AGTGATGTGGTCCACACAGGAGAATATGATCTCTATAAGCTACTGCCACTATGGGTAAAT
ATGCTGTCCATTTAGGAATGCAAATAACACAAACTGAGATGCAAGATAAGATTGTGTTGT
TGCTGCCCATAATATATATCCCACTCTTTCAATGTTGTTTCTCGTCATTCTTTCAATGTT
GTAATGCTGTTTCTCATGAACTATACTGCTCCTCATATTGTAAAAAGATTTTCATATTGA
TAAGAAATGAGATCTCCTCTATCATGGCAATGA