Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g01130.t01
CDS Infomation

cds chromosome:12X:19:7212128:7217546:1 gene:VIT_19s0090g01130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATCGACTCGGGTCCGATTAGTTCGTGTTCTAAACAGAACCAGATGATCTATCAG
GAGTGGTTCAATTTCGCTGATTCAGATTCCGATGGCCGCATTACTGGAAATGACGCCATA
AAGTTCTTCGCTATGTCCAATTTGCCTCGCCCGGATCTCAAACAGGTGTGGGCAATTGCA
GATACCAAACGACAGGGTTTTCTTGGTTTAAAAGAGTTCATTACTGCCATGCAGCTAGTT
TCCCTGGCACAAGCTGGACATGCAATCACACAGGATCTCCTGCACAGTGAAGTTGACTTG
GGAAACTTAAATCCCCCTCAAATGGAAGGCTTGGCTGCGTTACTAGCTAAGAAAAAGCGT
GCACACAAAACAAGTGATCCTGATATAAATGGTAGTTCTCAACCACAGCCATCACCAACT
GCTAGTTGGTTCACTTCAAAATCTTCGAAGAAGGTACCTCTATCTTCCGTTACATCAATA
ATTGATGGCTTGAAGAGGTTGTACATTCAGAAGCTCAAGCCATTAGAGGTTACATATCGT
TTTAACGATTTTGCATCCCCCTTGTTGACAAATAGCGATTTTGATGCCAAACCTATGGTT
ATGCTTTTGGGTCAATACTCAACTGGAAAAACTACTTTCATTAAACATTTGCTGAAGAGT
AGTTATCCAGGAGCACACATTGGACCTGAACCTACTACTGACAGATTCGTTGTCGTTATG
TCTGGACCTGATGAAAGAAGTATTCCTGGAAACACAATTGCTGTTCAAGCAGACATGCCT
TACAGTGGTCTGACAACTTTTGGAACGGCATTTTTGTCCAAATTCGAGTGTTCTCAAATG
CCGCATTCTCTACTGGAGCACATCACGTTTGTGGATACTCCTGGAGTTCTATCAGGAGAA
AAGCAACGAACACAGCGAGCCTACGATTTTACTGGTGTAACATCATGGTTTGCTGCAAAG
TGTGACCTCATTCTACTGCTGTTTGATCCTCATAAACTTGATGTTAGTGATGAATTCAAG
CGTGTGATTTCATCTCTTCATGGCCATGATGACAAGATACGTGTGGTTCTGAACAAGGCG
GACCAAGTGGATACTCAGCAACTTATGAGGGTTTATGGAGCACTGATGTGGTCACTTGGG
AAGGTTCTAAATACTCCTGAGGTTATGCGTGTTTATATTGGCTCTTTCAACGACAAACCT
GTAAATGAAGCTGCTGTTGGTCCAATTGGGAAAGAACTTTTTGAAAAAGAGCAGGAAAAC
CTTCTTTCTGATTTAAAAGATATCCCCAAGAAGGCTTGTGATCGCCGAATCAATGAATTT
GTAAAACGGGCCCGAGCTGCCAAGATTCATGCCTACATCATCAGCCATCTAAAGAAGGAG
ATGCCTACTATGATGGGCAAAGCCAAGACTCAGCAGAGGCTTATCGACAATCTGGAAGAT
GAATTTGCAAAGGTCCAGAGGGAGTTCCATCTGCCGGCAGGGGATTTCCCGAACGTTGAC
CATTTCAGGGAGGTACTGAGTGGTTACAGCATAGACAAATTTGAGAGGTTGAAGCCTAAA
ATGATACAAACCGTAGATGACATGTTGGGTTATGACATCCCGGAGCTCCTGAAGAGTTTC
AGAAATCCATACGATTAA

Peptide Sequence

PEP ID

VIT_19s0090g01130.t01
PEP Infomation

pep chromosome:12X:19:7212128:7217546:1 gene:VIT_19s0090g01130 transcript:VIT_19s0090g01130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEIDSGPISSCSKQNQMIYQEWFNFADSDSDGRITGNDAIKFFAMSNLPRPDLKQVWAIA
DTKRQGFLGLKEFITAMQLVSLAQAGHAITQDLLHSEVDLGNLNPPQMEGLAALLAKKKR
AHKTSDPDINGSSQPQPSPTASWFTSKSSKKVPLSSVTSIIDGLKRLYIQKLKPLEVTYR
FNDFASPLLTNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVVM
SGPDERSIPGNTIAVQADMPYSGLTTFGTAFLSKFECSQMPHSLLEHITFVDTPGVLSGE
KQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLHGHDDKIRVVLNKA
DQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPVNEAAVGPIGKELFEKEQEN
LLSDLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPTMMGKAKTQQRLIDNLED
EFAKVQREFHLPAGDFPNVDHFREVLSGYSIDKFERLKPKMIQTVDDMLGYDIPELLKSF
RNPYD

Transcript Sequence

Transcript ID

VIT_19s0090g01130.t01
Transcript Infomation

cdna chromosome:12X:19:7212128:7217546:1 gene:VIT_19s0090g01130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCCAATGGAGATCGACTCGGGTCCGATTAGTTCGTGTTCTAAACAGAACCAGATGATCT
ATCAGGAGTGGTTCAATTTCGCTGATTCAGATTCCGATGGCCGCATTACTGGAAATGACG
CCATAAAGTTCTTCGCTATGTCCAATTTGCCTCGCCCGGATCTCAAACAGGTGTGGGCAA
TTGCAGATACCAAACGACAGGGTTTTCTTGGTTTAAAAGAGTTCATTACTGCCATGCAGC
TAGTTTCCCTGGCACAAGCTGGACATGCAATCACACAGGATCTCCTGCACAGTGAAGTTG
ACTTGGGAAACTTAAATCCCCCTCAAATGGAAGGCTTGGCTGCGTTACTAGCTAAGAAAA
AGCGTGCACACAAAACAAGTGATCCTGATATAAATGGTAGTTCTCAACCACAGCCATCAC
CAACTGCTAGTTGGTTCACTTCAAAATCTTCGAAGAAGGTACCTCTATCTTCCGTTACAT
CAATAATTGATGGCTTGAAGAGGTTGTACATTCAGAAGCTCAAGCCATTAGAGGTTACAT
ATCGTTTTAACGATTTTGCATCCCCCTTGTTGACAAATAGCGATTTTGATGCCAAACCTA
TGGTTATGCTTTTGGGTCAATACTCAACTGGAAAAACTACTTTCATTAAACATTTGCTGA
AGAGTAGTTATCCAGGAGCACACATTGGACCTGAACCTACTACTGACAGATTCGTTGTCG
TTATGTCTGGACCTGATGAAAGAAGTATTCCTGGAAACACAATTGCTGTTCAAGCAGACA
TGCCTTACAGTGGTCTGACAACTTTTGGAACGGCATTTTTGTCCAAATTCGAGTGTTCTC
AAATGCCGCATTCTCTACTGGAGCACATCACGTTTGTGGATACTCCTGGAGTTCTATCAG
GAGAAAAGCAACGAACACAGCGAGCCTACGATTTTACTGGTGTAACATCATGGTTTGCTG
CAAAGTGTGACCTCATTCTACTGCTGTTTGATCCTCATAAACTTGATGTTAGTGATGAAT
TCAAGCGTGTGATTTCATCTCTTCATGGCCATGATGACAAGATACGTGTGGTTCTGAACA
AGGCGGACCAAGTGGATACTCAGCAACTTATGAGGGTTTATGGAGCACTGATGTGGTCAC
TTGGGAAGGTTCTAAATACTCCTGAGGTTATGCGTGTTTATATTGGCTCTTTCAACGACA
AACCTGTAAATGAAGCTGCTGTTGGTCCAATTGGGAAAGAACTTTTTGAAAAAGAGCAGG
AAAACCTTCTTTCTGATTTAAAAGATATCCCCAAGAAGGCTTGTGATCGCCGAATCAATG
AATTTGTAAAACGGGCCCGAGCTGCCAAGATTCATGCCTACATCATCAGCCATCTAAAGA
AGGAGATGCCTACTATGATGGGCAAAGCCAAGACTCAGCAGAGGCTTATCGACAATCTGG
AAGATGAATTTGCAAAGGTCCAGAGGGAGTTCCATCTGCCGGCAGGGGATTTCCCGAACG
TTGACCATTTCAGGGAGGTACTGAGTGGTTACAGCATAGACAAATTTGAGAGGTTGAAGC
CTAAAATGATACAAACCGTAGATGACATGTTGGGTTATGACATCCCGGAGCTCCTGAAGA
GTTTCAGAAATCCATACGATTAAATGGATGCGGGCAGTTCAATGAGATACATATCTTGGA
TGAAGACCCAAGTGACTGGAGGCATGTACAGAGCCACCCTTCTTCCCTTCCATTGATATT
TTGAGACTTGTCTGAGCAGTTCCTTGGCTCCTCCATGATGTCAGTCAGTATCATATAAAT
TATCACTCCTTTCCCTTTCATCAGAGG