Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g00830.t01
CDS Infomation

cds chromosome:12X:19:6870963:6877992:-1 gene:VIT_19s0090g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAACCAAATGTAGAACTGTTGCAGTTGCACTCTTCCTTTCAATCCTTATGTTTTCA
CCAGAATTTTCGGCCTCAGATGGTGGATTGGTTAGAATTGGACTCAAAAAGAGGGCTTTT
GATCAAACCAACCGCCTAGCTGCACGGATAGAGTCCAAGCAAGGGGAGGCCTTGGGAACT
TCAATTCGGAAGTATAATCTTCATGGGAATGCTGCGGGATCGAAACACACGTATGTTGTG
GCACTACACAACTACATGGATGCTCAATATTTTGGGGAAATCAGTATTGGAACTCCCCCT
CAAAAGTTCACTGTAATATTTGACACTGGCAGTTCTAATCTGTGGGTGCCCTCTTCTAAA
TGTTACTTTTCGGTTGCATGCTATTTCCACTCCAAGTACAAGTCAAGCCAATCAAGCACC
TACAAAAAGAATGGGACATCAGCAGATATCCATTATGGAACTGGTGCTATTTCTGGTTTC
TTCAGTAAAGACGATGTAAAAGTTGGTGACCTTGCAGTCATAAATCAGGAATTTATTGAG
GCAACGAAAGAACCCAGCATCACATTTGCTTTGGCCAAGTTTGATGGCATACTTGGACTT
GGGTTTCAAGAGATTTCAGTTGGAAATGCTGTGCCTGTGTGGTACAACATGATCAATCAA
GAACTTATTAAAGAACCAATTTTCTCATTTTGGTTTAACCGAAACTCCAATGAAGAAGTA
GGGGGTGAAATTGTATTTGGTGGTATTGATTCTGATCATTACAAGGGTAAGCACACCTAT
GTTCCTGTAACAAAGAAAGGCTATTGGCAGTTTGATCTGGGTGATGTCATGATTGGTGGT
AAAACAACTGGATTTTGCGCTAGTGGCTGTTCAGCAATTGCTGATTCTGGAACCTCTCTG
TTAGCTGGTCCAACAACAATTATTACTGAAGTCAATCATGCCATTGGAGCCTCTGGGTTT
GTAAGCCAAGAATGCAGAGCAGTTGTCCAACAATATGGGCAAATAATAATTGACATGCTA
TTAACAAAGGAGCAACCTCAGAAAATCTGCTCACAAATTGGTTTGTGCGCTTTCAATGGT
ATTCGAGGTGTTAGTATGGGCATTGAGAGTGTCGTGGATGAGAACAATAGCAAGGCATCT
GATGGTCTGCATGATACCATGTGCTCTGCCTGTTCAATGGCAGTTGTCTGGATACAAAAT
AAGCTTGGTCAGAATGAAACGATTGACCGTATATTAAAATACGTCAATGAGCTCTGTGAT
CGGCTGCCTAGTCCAATGGGAGAATCAGCAGTTGATTGTGGTAGTCTGTCTTCAATGCCT
AATGTTTCGTTAACCATTGGTGGAAAAGTATTTGATCTCAGCCCCAAGCAGTACATCCTC
AAAGTGGGTGAGGGAGAAATAGCTCAATGCATTAGTGGATTTACAGCTTTGGATGTGCCA
CCTCCTCATGGACCTCTCTGGATCCTGGGTGACGTTTTCATGGGTCAGTACCACACGGTA
TTTGATTACGGAAATATGAAAGTTGGATTCGCGGAAGCTGCATAA

Peptide Sequence

PEP ID

VIT_19s0090g00830.t01
PEP Infomation

pep chromosome:12X:19:6870963:6877992:-1 gene:VIT_19s0090g00830 transcript:VIT_19s0090g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTKCRTVAVALFLSILMFSPEFSASDGGLVRIGLKKRAFDQTNRLAARIESKQGEALGT
SIRKYNLHGNAAGSKHTYVVALHNYMDAQYFGEISIGTPPQKFTVIFDTGSSNLWVPSSK
CYFSVACYFHSKYKSSQSSTYKKNGTSADIHYGTGAISGFFSKDDVKVGDLAVINQEFIE
ATKEPSITFALAKFDGILGLGFQEISVGNAVPVWYNMINQELIKEPIFSFWFNRNSNEEV
GGEIVFGGIDSDHYKGKHTYVPVTKKGYWQFDLGDVMIGGKTTGFCASGCSAIADSGTSL
LAGPTTIITEVNHAIGASGFVSQECRAVVQQYGQIIIDMLLTKEQPQKICSQIGLCAFNG
IRGVSMGIESVVDENNSKASDGLHDTMCSACSMAVVWIQNKLGQNETIDRILKYVNELCD
RLPSPMGESAVDCGSLSSMPNVSLTIGGKVFDLSPKQYILKVGEGEIAQCISGFTALDVP
PPHGPLWILGDVFMGQYHTVFDYGNMKVGFAEAA

Transcript Sequence

Transcript ID

VIT_19s0090g00830.t01
Transcript Infomation

cdna chromosome:12X:19:6870963:6877992:-1 gene:VIT_19s0090g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTTCCATCCTCATACGTTTCTTTGGCAACATGGGAACCAAATGTAGAACTGTTGCAGTT
GCACTCTTCCTTTCAATCCTTATGTTTTCACCAGAATTTTCGGCCTCAGATGGTGGATTG
GTTAGAATTGGACTCAAAAAGAGGGCTTTTGATCAAACCAACCGCCTAGCTGCACGGATA
GAGTCCAAGCAAGGGGAGGCCTTGGGAACTTCAATTCGGAAGTATAATCTTCATGGGAAT
GCTGCGGGATCGAAACACACGTATGTTGTGGCACTACACAACTACATGGATGCTCAATAT
TTTGGGGAAATCAGTATTGGAACTCCCCCTCAAAAGTTCACTGTAATATTTGACACTGGC
AGTTCTAATCTGTGGGTGCCCTCTTCTAAATGTTACTTTTCGGTTGCATGCTATTTCCAC
TCCAAGTACAAGTCAAGCCAATCAAGCACCTACAAAAAGAATGGGACATCAGCAGATATC
CATTATGGAACTGGTGCTATTTCTGGTTTCTTCAGTAAAGACGATGTAAAAGTTGGTGAC
CTTGCAGTCATAAATCAGGAATTTATTGAGGCAACGAAAGAACCCAGCATCACATTTGCT
TTGGCCAAGTTTGATGGCATACTTGGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCT
GTGCCTGTGTGGTACAACATGATCAATCAAGAACTTATTAAAGAACCAATTTTCTCATTT
TGGTTTAACCGAAACTCCAATGAAGAAGTAGGGGGTGAAATTGTATTTGGTGGTATTGAT
TCTGATCATTACAAGGGTAAGCACACCTATGTTCCTGTAACAAAGAAAGGCTATTGGCAG
TTTGATCTGGGTGATGTCATGATTGGTGGTAAAACAACTGGATTTTGCGCTAGTGGCTGT
TCAGCAATTGCTGATTCTGGAACCTCTCTGTTAGCTGGTCCAACAACAATTATTACTGAA
GTCAATCATGCCATTGGAGCCTCTGGGTTTGTAAGCCAAGAATGCAGAGCAGTTGTCCAA
CAATATGGGCAAATAATAATTGACATGCTATTAACAAAGGAGCAACCTCAGAAAATCTGC
TCACAAATTGGTTTGTGCGCTTTCAATGGTATTCGAGGTGTTAGTATGGGCATTGAGAGT
GTCGTGGATGAGAACAATAGCAAGGCATCTGATGGTCTGCATGATACCATGTGCTCTGCC
TGTTCAATGGCAGTTGTCTGGATACAAAATAAGCTTGGTCAGAATGAAACGATTGACCGT
ATATTAAAATACGTCAATGAGCTCTGTGATCGGCTGCCTAGTCCAATGGGAGAATCAGCA
GTTGATTGTGGTAGTCTGTCTTCAATGCCTAATGTTTCGTTAACCATTGGTGGAAAAGTA
TTTGATCTCAGCCCCAAGCAGTACATCCTCAAAGTGGGTGAGGGAGAAATAGCTCAATGC
ATTAGTGGATTTACAGCTTTGGATGTGCCACCTCCTCATGGACCTCTCTGGATCCTGGGT
GACGTTTTCATGGGTCAGTACCACACGGTATTTGATTACGGAAATATGAAAGTTGGATTC
GCGGAAGCTGCATAACTCAATCTTATCTTTCCTATCCTATTCTATTACTGTGCTCTATAT
CCACCTCTGAAAACCTTGACATCTTCAACATTCAATAGGTATCCTCTCAAGTGTTCGAAG
TTATTAAATGGTAATTGAATGTAAATATCTGCGGATGCGATGCTCGGTGTTTATCAGAAA
AGAATACTGTGAAGTTTGGGTTACTCAGTTGTTCATACAATGGTTTTATAGGGAGTCTGT
AAGGTATATTGCTATTTTGTGAAATCCTGTTCTTTTTGACAGGATTTGAAGATTTCCACC
CTTTTCTGCCTATTTATCTGAACTTATGAGAATTGGTTTGCTTGTTTAAAGTTGGAAAAG
AGAGGGATGCTGGCAAAAACCTGAAATTTGATAAACCATTGCTGGTGTATTATCTGAATG
TTCTCTTTTACTGATACATTTCTATCAAT