Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g00450.t01
CDS Infomation

cds chromosome:12X:19:6593753:6601150:1 gene:VIT_19s0090g00450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAAGGGCAACGAGAAGAGCCTAACGACGTCGTTTCAGAAACTCCATCTCAGTCCC
ATTTCCAAATCCAAGCCTTCCGTCATCCCTCCGACTTTTCAATCCTCCAGATCACCTATT
GAGAAGACAAAGCCTCCAAGTTTGGAAAGTCTGTGCCTCGGAGTTGTAGGGAAGCATTTT
GAGGATATCATTGGGGACTTGGGTGAGATTGCGGTGAACTTTCCAGCAGATACTAAGATG
GCAATGGCAGCAATTGCTAGGAGAAGACAGTTACTTAATGATGATGTCATCATCTCATTG
GCCGAAAGTTCATGGGAAATCCTTGATATCTCTGGTTCAGATGTTTCTGATTTTGGTTTG
GCAAAGGTGGCAGAGAGATGCAAAGTTCTCCGAGCTGTAGATATAAGCCGATGCAGCAAA
GTCACTGCAGCTGGTGTTTCCGAGCTTGTGTGGCATTGTCATTCCTTAGAGACATTGAGA
TGCGGAGGGTGCCCGAGAAGTGACCATACCGCACGCCAATGCTTGGGTATCTTCAAACCA
AAGCTGAATGATATCGAGGGAGAGTCCTGGGAGGAACTTGATCCCACAGAGATTGCTCAT
GGTGCAGAGTCATTGCGCTGGCTCGTGTGGCCAAAAATTGATAACAATTCATTGGAGAGC
TTTGCTGCCGAATGCCCACGCATCATAGTAAACCCAAAGCCATCGCCTTTTGGTTTCAGA
GGGGTCAAGGTTCCAGTGGAAGCACTGCCAAACGTAGCACTGGATGAGCCCATTGTTAAG
GATATTGATCCCCGAACATGGGCGGTTAGTGGGTTTACAGCAAGACCAACAGCTCCGTCA
AGTCCCAGCTCCACAGAGTTGCCCATTGCTGAAAAATTTAGACTTGCGTTTGTGGAGAGA
GACAGCCGATTAGCACCAAAGCGAGCAAAGAATGCAAGGCAACACTTGCGGAGGGCAGAG
AGGGAGTGGGTGATGACAAGCACAAGGGCAAAGGCATTAGCTCTGGCCTCACAAGCCAGC
AAGTCTCTACATGGTCGGAATTAG

Peptide Sequence

PEP ID

VIT_19s0090g00450.t01
PEP Infomation

pep chromosome:12X:19:6593753:6601150:1 gene:VIT_19s0090g00450 transcript:VIT_19s0090g00450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKGNEKSLTTSFQKLHLSPISKSKPSVIPPTFQSSRSPIEKTKPPSLESLCLGVVGKHF
EDIIGDLGEIAVNFPADTKMAMAAIARRRQLLNDDVIISLAESSWEILDISGSDVSDFGL
AKVAERCKVLRAVDISRCSKVTAAGVSELVWHCHSLETLRCGGCPRSDHTARQCLGIFKP
KLNDIEGESWEELDPTEIAHGAESLRWLVWPKIDNNSLESFAAECPRIIVNPKPSPFGFR
GVKVPVEALPNVALDEPIVKDIDPRTWAVSGFTARPTAPSSPSSTELPIAEKFRLAFVER
DSRLAPKRAKNARQHLRRAEREWVMTSTRAKALALASQASKSLHGRN

Transcript Sequence

Transcript ID

VIT_19s0090g00450.t01
Transcript Infomation

cdna chromosome:12X:19:6593753:6601150:1 gene:VIT_19s0090g00450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATCACAGACCGATCTGGGTGTCGGAGAATTGTGATGGAAAAGGGCAACGAGAAGAGCC
TAACGACGTCGTTTCAGAAACTCCATCTCAGTCCCATTTCCAAATCCAAGCCTTCCGTCA
TCCCTCCGACTTTTCAATCCTCCAGATCACCTATTGAGAAGACAAAGCCTCCAAGTTTGG
AAAGTCTGTGCCTCGGAGTTGTAGGGAAGCATTTTGAGGATATCATTGGGGACTTGGGTG
AGATTGCGGTGAACTTTCCAGCAGATACTAAGATGGCAATGGCAGCAATTGCTAGGAGAA
GACAGTTACTTAATGATGATGTCATCATCTCATTGGCCGAAAGTTCATGGGAAATCCTTG
ATATCTCTGGTTCAGATGTTTCTGATTTTGGTTTGGCAAAGGTGGCAGAGAGATGCAAAG
TTCTCCGAGCTGTAGATATAAGCCGATGCAGCAAAGTCACTGCAGCTGGTGTTTCCGAGC
TTGTGTGGCATTGTCATTCCTTAGAGACATTGAGATGCGGAGGGTGCCCGAGAAGTGACC
ATACCGCACGCCAATGCTTGGGTATCTTCAAACCAAAGCTGAATGATATCGAGGGAGAGT
CCTGGGAGGAACTTGATCCCACAGAGATTGCTCATGGTGCAGAGTCATTGCGCTGGCTCG
TGTGGCCAAAAATTGATAACAATTCATTGGAGAGCTTTGCTGCCGAATGCCCACGCATCA
TAGTAAACCCAAAGCCATCGCCTTTTGGTTTCAGAGGGGTCAAGGTTCCAGTGGAAGCAC
TGCCAAACGTAGCACTGGATGAGCCCATTGTTAAGGATATTGATCCCCGAACATGGGCGG
TTAGTGGGTTTACAGCAAGACCAACAGCTCCGTCAAGTCCCAGCTCCACAGAGTTGCCCA
TTGCTGAAAAATTTAGACTTGCGTTTGTGGAGAGAGACAGCCGATTAGCACCAAAGCGAG
CAAAGAATGCAAGGCAACACTTGCGGAGGGCAGAGAGGGAGTGGGTGATGACAAGCACAA
GGGCAAAGGCATTAGCTCTGGCCTCACAAGCCAGCAAGTCTCTACATGGTCGGAATTAGT
TGGTAGGCTTCCAATGTTCATTGCCTATTTTAATTATATTTTTTTATTTTAATGCCTGTA
TATTACGAAAACTGTAAAATATGTTTGAATAATGATGAAGATGGCGAGGTTTGTTAAAA