Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g00370.t01
CDS Infomation

cds chromosome:12X:19:6519954:6524268:1 gene:VIT_19s0090g00370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGATCACAGCTACAACTGAGCTTCCGACGACCATTCCAGCGATTCTTTCATCTAGG
GCTCGAAACGCATCGCCTGACTCAGATCTTATCTCGAAAAGGAGTTCCAGAAAACCTCCT
CGCCGGAAAGCCAGAACCCCAGCTGGCGGGGCTCGGTTGAAGCGCGACGGAGCTGCGGGT
GGGCGGCGAAGTAGGCCAGAAACGCCTCTTCTCCGGTGGAAGTTCGATGATATAGAGAGG
GAGAAGGATGCGAATGTCTTGGATGTGGACGAGAAGATAGCGCCGGAGCACGGTCGGAGA
AGTGGCCGGAAAGTGAGGAAGGGTAGGGAGGTGACGGTTTCGTCGAGAAGGCTCGCCTCC
GGGCTGTGGCGGCTTCAACTTCCGGGGGTGGACGCCGCCCATGGCGGGAGATGGAGCCGA
CAAAAAAGTGAAGATCGGTTAGGGTTTGAGCCTGGCATCGACCGTGTCAGAACCCCATTT
CCCTGTCAAAGCAATACTAAAGCATATGATTCTGAAGCTAAGGATCTGTTACAGAGTCCT
CACTCCATGCACCATCACAAGAGTGGATTTCTGTGTAGACTTGAACCTTCATTTCAATTT
TCCAACTCCGCAATGGAAGGGGCAACAAAGTGGAACCCTGTCTGCTCAAAAACATCAGAT
GAGGTTCGACAGTTATATGGCCAAATGAAGCAGTTTGACCAGCAAGTTAGTGCTGTATCA
GTGGTTTCTGCCCTTGAAGCAGAACTTGCGCAGGCTCGAGCCCGCATTGATGAACTTGAG
GCAGAGCGACGGTCCTCCAAAAAGAAACTCGAGCACTTCTTGAAAAAAGTCAGTGAGGAA
AGAGCCTCATGGCGGAGAAGGGAACATGAGAAGATACGTGCAATTATTGATGATGTCAAA
ACTGACTTGAACCGAGAAAGGAAAAATCGCCAAAGGATAGAACTTATTAATTCCAAGTTG
GTCAATGAGCTGTCTGATGTGAAGTTATCAGCCAAGCGGTTTATGCAGGACTATGAAAAA
GAGAGGAAAGACAGGGAAGTACTAGAGGAGGTATGCGATGAGCTTGCTAAGGAAATCGGA
GACGACAAGGCTGAAGCTGAATCATTAAAGAGGGAATCAATGAAACTCAGGGATGAAATG
GAAGAGGAGAGGAAGATGTTGCAGATGGCTGAGGTCTGGCGTGAAGAGCGTGTGCAGATG
AAGTTGGTGGCTGCTAAGGTGGCACTTGAAGAGAAGTATGCTCAGATGAACAAGGTCATG
GCAGATATAGCAGCTTTTCTAAGGTCAAAAGGTGCAAATCCAGATGTGAAGGAGATGAAA
GAAGTAGAGTCACTTTGTGAAGCTGCTGCTGCAGTGAATATTCAAGATGTCAAGGAGTTT
ACTTATGTGCCCCCAAATCCAGATGATATTTTCTCCATTTTAGAAGAGGTTAACTTTGGT
GAACCCAACGAGAGAGAAATTGAAGCCTGTGCTGCTTATAGTCCTGCCAGCCATGCTTCC
AAAATTCATACTGTGAGTCCTGAAATTAATATGGTCAAGAAAGATGACATTAGGAGGCAT
TCTAATGCATTTTCGGAAGAGAATGGTGATATAGAAGAAGATGAGAGTGGGTGGGAAACT
GTGAGCCATGCTGAGGATCAGGGCTCAAGTTATTCACCTGGAGGAAGTGATCCATCTGTC
CACAAGTTTCGCCAAGACAGTAATGCATCAGGAAGTGGAACAGATTGGGAAGAAAATGCA
GATGAGGAAACGCCAATTACCGAAATCAGTGAAGTCCGTTCAGTGCCTATGAAGCAATTG
AAGAAGGGCTCATCAATATCCAGGCTTTGGAAATCATGCCCAAATAATGGTGAAAACTAC
AAGATAATCTCAGTAGTAGAGGGAATGAATGGAAGGCTTTCAAATGGAAGGATTTCTAGT
GCAGGTATCATGTCTCCAGATCGAGGGTCAGGTAAAGGTGGTCTTAGCCCTCCCGATCTG
GCAGGCCAGTGGAGCTCGCCTGATTCAGGGAATCCTCACGTAAACCGAGGAATGAAAGGG
TGCATTGAATGGCCTCGTGGCGCCCAGAAGAACAGTTTGAAGGCAAAGCTTTTGGAGGCA
AGAATGGAAAGTCAAAAGATCCAATTACGCCAGGTTCTTAAACAGAAGATTTAA

Peptide Sequence

PEP ID

VIT_19s0090g00370.t01
PEP Infomation

pep chromosome:12X:19:6519954:6524268:1 gene:VIT_19s0090g00370 transcript:VIT_19s0090g00370.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKITATTELPTTIPAILSSRARNASPDSDLISKRSSRKPPRRKARTPAGGARLKRDGAAG
GRRSRPETPLLRWKFDDIEREKDANVLDVDEKIAPEHGRRSGRKVRKGREVTVSSRRLAS
GLWRLQLPGVDAAHGGRWSRQKSEDRLGFEPGIDRVRTPFPCQSNTKAYDSEAKDLLQSP
HSMHHHKSGFLCRLEPSFQFSNSAMEGATKWNPVCSKTSDEVRQLYGQMKQFDQQVSAVS
VVSALEAELAQARARIDELEAERRSSKKKLEHFLKKVSEERASWRRREHEKIRAIIDDVK
TDLNRERKNRQRIELINSKLVNELSDVKLSAKRFMQDYEKERKDREVLEEVCDELAKEIG
DDKAEAESLKRESMKLRDEMEEERKMLQMAEVWREERVQMKLVAAKVALEEKYAQMNKVM
ADIAAFLRSKGANPDVKEMKEVESLCEAAAAVNIQDVKEFTYVPPNPDDIFSILEEVNFG
EPNEREIEACAAYSPASHASKIHTVSPEINMVKKDDIRRHSNAFSEENGDIEEDESGWET
VSHAEDQGSSYSPGGSDPSVHKFRQDSNASGSGTDWEENADEETPITEISEVRSVPMKQL
KKGSSISRLWKSCPNNGENYKIISVVEGMNGRLSNGRISSAGIMSPDRGSGKGGLSPPDL
AGQWSSPDSGNPHVNRGMKGCIEWPRGAQKNSLKAKLLEARMESQKIQLRQVLKQKI

Transcript Sequence

Transcript ID

VIT_19s0090g00370.t01
Transcript Infomation

cdna chromosome:12X:19:6519954:6524268:1 gene:VIT_19s0090g00370 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCTGAAACACTCTCTCTCTCGGCGAGAAAGAGGAAACGAGTGCTGGACTTTCCGTCATTT
TCTCACTACCCAAACATCTACCCCCACTGCCTTCGTCACAGCCCCTTTGCTCTCTTTTCA
TACTCTTTGGACTTGGTTTCCAAGCTCTCATGTCAGTGTCTCGCTGGAGACGATGAAGAT
CACAGCTACAACTGAGCTTCCGACGACCATTCCAGCGATTCTTTCATCTAGGGCTCGAAA
CGCATCGCCTGACTCAGATCTTATCTCGAAAAGGAGTTCCAGAAAACCTCCTCGCCGGAA
AGCCAGAACCCCAGCTGGCGGGGCTCGGTTGAAGCGCGACGGAGCTGCGGGTGGGCGGCG
AAGTAGGCCAGAAACGCCTCTTCTCCGGTGGAAGTTCGATGATATAGAGAGGGAGAAGGA
TGCGAATGTCTTGGATGTGGACGAGAAGATAGCGCCGGAGCACGGTCGGAGAAGTGGCCG
GAAAGTGAGGAAGGGTAGGGAGGTGACGGTTTCGTCGAGAAGGCTCGCCTCCGGGCTGTG
GCGGCTTCAACTTCCGGGGGTGGACGCCGCCCATGGCGGGAGATGGAGCCGACAAAAAAG
TGAAGATCGGTTAGGGTTTGAGCCTGGCATCGACCGTGTCAGAACCCCATTTCCCTGTCA
AAGCAATACTAAAGCATATGATTCTGAAGCTAAGGATCTGTTACAGAGTCCTCACTCCAT
GCACCATCACAAGAGTGGATTTCTGTGTAGACTTGAACCTTCATTTCAATTTTCCAACTC
CGCAATGGAAGGGGCAACAAAGTGGAACCCTGTCTGCTCAAAAACATCAGATGAGGTTCG
ACAGTTATATGGCCAAATGAAGCAGTTTGACCAGCAAGTTAGTGCTGTATCAGTGGTTTC
TGCCCTTGAAGCAGAACTTGCGCAGGCTCGAGCCCGCATTGATGAACTTGAGGCAGAGCG
ACGGTCCTCCAAAAAGAAACTCGAGCACTTCTTGAAAAAAGTCAGTGAGGAAAGAGCCTC
ATGGCGGAGAAGGGAACATGAGAAGATACGTGCAATTATTGATGATGTCAAAACTGACTT
GAACCGAGAAAGGAAAAATCGCCAAAGGATAGAACTTATTAATTCCAAGTTGGTCAATGA
GCTGTCTGATGTGAAGTTATCAGCCAAGCGGTTTATGCAGGACTATGAAAAAGAGAGGAA
AGACAGGGAAGTACTAGAGGAGGTATGCGATGAGCTTGCTAAGGAAATCGGAGACGACAA
GGCTGAAGCTGAATCATTAAAGAGGGAATCAATGAAACTCAGGGATGAAATGGAAGAGGA
GAGGAAGATGTTGCAGATGGCTGAGGTCTGGCGTGAAGAGCGTGTGCAGATGAAGTTGGT
GGCTGCTAAGGTGGCACTTGAAGAGAAGTATGCTCAGATGAACAAGGTCATGGCAGATAT
AGCAGCTTTTCTAAGGTCAAAAGGTGCAAATCCAGATGTGAAGGAGATGAAAGAAGTAGA
GTCACTTTGTGAAGCTGCTGCTGCAGTGAATATTCAAGATGTCAAGGAGTTTACTTATGT
GCCCCCAAATCCAGATGATATTTTCTCCATTTTAGAAGAGGTTAACTTTGGTGAACCCAA
CGAGAGAGAAATTGAAGCCTGTGCTGCTTATAGTCCTGCCAGCCATGCTTCCAAAATTCA
TACTGTGAGTCCTGAAATTAATATGGTCAAGAAAGATGACATTAGGAGGCATTCTAATGC
ATTTTCGGAAGAGAATGGTGATATAGAAGAAGATGAGAGTGGGTGGGAAACTGTGAGCCA
TGCTGAGGATCAGGGCTCAAGTTATTCACCTGGAGGAAGTGATCCATCTGTCCACAAGTT
TCGCCAAGACAGTAATGCATCAGGAAGTGGAACAGATTGGGAAGAAAATGCAGATGAGGA
AACGCCAATTACCGAAATCAGTGAAGTCCGTTCAGTGCCTATGAAGCAATTGAAGAAGGG
CTCATCAATATCCAGGCTTTGGAAATCATGCCCAAATAATGGTGAAAACTACAAGATAAT
CTCAGTAGTAGAGGGAATGAATGGAAGGCTTTCAAATGGAAGGATTTCTAGTGCAGGTAT
CATGTCTCCAGATCGAGGGTCAGGTAAAGGTGGTCTTAGCCCTCCCGATCTGGCAGGCCA
GTGGAGCTCGCCTGATTCAGGGAATCCTCACGTAAACCGAGGAATGAAAGGGTGCATTGA
ATGGCCTCGTGGCGCCCAGAAGAACAGTTTGAAGGCAAAGCTTTTGGAGGCAAGAATGGA
AAGTCAAAAGATCCAATTACGCCAGGTTCTTAAACAGAAGATTTAAATGTGGCAAGTTAT
CAATGTCCAATCCTGCTCATCAAAGCTACTGATAAAACTGGATGGAAGTAAGTAGTTTCA
TTTCAAAGCTTCTGAGATACCTCTCTTCTGCCTGTTGAAACTACATTGAAGATTATTAGT
GAAGAGAACATGTGAATAAAAATACACATGATTGGCACACATTGGACTAGCAACATTTGC
TGGTTCTCCAGATTTAGAGTTACATCGTATCTCCGCTGCTGACATCTTGGAAATAATAAT
GTTGGATGGATAAGCTGGGTATCATCTTCTATCGGGGTATAGCAATCAATCCCCTTAGCA
ACTAGTAAATCAAAATGCAAGTTATGCTGTTATTACTATATCATGTAGCCAAGTCTGAAG
ATCCCATGTAGAGACAAAA