Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g00300.t01
CDS Infomation

cds chromosome:12X:19:6436194:6451813:1 gene:VIT_19s0090g00300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGCCAGAGCCAGAGAGTTCTCCGACGATGGCGTTTCGCCATCTCTGAGCCAAGCG
TTAGTGTTCGCCACCATGTGCATTATTGGCCTCCCCGTCGAGGTTCACGTCAAGGACGGC
TCGGTGTACTCAGGAATCCTCCACACGGCTTGTCTCGGGAAGGACTACGGAATAATTTTG
AAGAAAGCAAGGATGATCAAGAAGGGGAAACTTGAGGCAAATGTGGCACATGGTGGCATG
GTAGAAACTCTTGTAATCCTGACAGGAGATCTTGTTCAAGTTGTTGCCAAGGGAGTCCAG
CTTTCGGATGATGATATTGTTAGAAACATAACTGGCGAGGATACAGAAGCTGTTGCAGGC
ACCATTCCTTCTTTTGAATGTCTAGGGACTGAGGCAAAAATGTTGAAACCTGGTAATGCT
GCTGTGCATAAGAAGCAAATTAACAACACAAGGAATTCAGTCCAAAATGAAAATGGGTTT
GCTCATGGTTTTATGGCAACACCCTCTGAGGATAACTTGATGAGCAAAATTGTGGAGCAT
GAAGTGAGAAGGAAGGAACCAAGTTATTTGGGTAGTGCCTTGGAAATTGAAAATGGAAAA
AGAGATTCCAAAATTTTAGCTAAGAGTGAAGAAGCTCCCAGCTTCCCAGACAATGGGAGA
CAGGTTGGAGATGATAGGATTCAAGGAAAGCAGGATCATTCCAAACAAAAATATGAGTTT
CATCGCAAAGAAACTGCTCATGAAATTCAAGGCTCAAGTTCAAGCTCGGATGCTTGCATC
ACCCATATGAAACCTGTTGAGGCAATAGATGGCAAGATGGCATCTGAGCTTTTACCAAAT
GGAGTATCACATGATGGTCCTGCTCCTTCATGTGTCAAACCCAACAAAAGTTGTTCTGAG
AGGGCCAGTGCAGCAGTCATGGATGATATTTCTACAGGTGTTTCAACTTCTTCCAATTCG
GTTGTGGGTGTTACCTCTGTATCATGTCCTACTTCCTTGGCAACTCCAACTGAGATGGTC
CTCCCTCGTAGTTCAATTTCTAATAAAAGTGCTAAGGAATCCAAGCTCAATCCTGGAGCA
AAAGTCTTCTCTCCTTCATTTACACATCCTAGATCAGTTACTCCTCCGGCAGTTCCTGCA
GTTGCAAGTGTGGCTTATGTACCAAACAATTCAACTGTGGTTCCTGTTGCTTCTTCACAG
CCAGAAATTGGAATTAGCCCTTTTGCACCTCGTTCATCTCTGCCTGTCAAGTTTGTTCCA
TACAGCAACCTGATAGCTGGAAACGGTGGCAGTGGTTCTCAATATTCACAACCTATTATT
GGGCATATGGCAAGCAGGCTGCAGCCGGTTAGATATGCTGGTCAGTATCAGCCTGTACAA
GCTGGACCTGCTTATGTACATCCAAATTCTCAAGCTGTTATGGTTGGACGGTTGGGGCAG
CTTGTCTATGTGCATCCAGTTTCATATGATGTGGTTCCGGGTGCAGCAGCTATCTCACAA
CTATCTGCACGTCCTCTGTTGACGCCAAATCAGGTCCAATTTCCAAAGCACCAAGGAAGT
GTACCATCCCAAGCACTGCAACTTTGTGTGCCTCCACCCGTTTTAGCTAATGGACAGCAG
CCATTTGCAGTGCCAAGTCACATCCCTCTAGTCCAACCTCCTTTCCCTGCTAACCGCCCT
ATCCCAGTCCCAGGATCTAATGCTCTCTTCAATACTAAGTTTCCATGA

Peptide Sequence

PEP ID

VIT_19s0090g00300.t01
PEP Infomation

pep chromosome:12X:19:6436194:6451813:1 gene:VIT_19s0090g00300 transcript:VIT_19s0090g00300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGARAREFSDDGVSPSLSQALVFATMCIIGLPVEVHVKDGSVYSGILHTACLGKDYGIIL
KKARMIKKGKLEANVAHGGMVETLVILTGDLVQVVAKGVQLSDDDIVRNITGEDTEAVAG
TIPSFECLGTEAKMLKPGNAAVHKKQINNTRNSVQNENGFAHGFMATPSEDNLMSKIVEH
EVRRKEPSYLGSALEIENGKRDSKILAKSEEAPSFPDNGRQVGDDRIQGKQDHSKQKYEF
HRKETAHEIQGSSSSSDACITHMKPVEAIDGKMASELLPNGVSHDGPAPSCVKPNKSCSE
RASAAVMDDISTGVSTSSNSVVGVTSVSCPTSLATPTEMVLPRSSISNKSAKESKLNPGA
KVFSPSFTHPRSVTPPAVPAVASVAYVPNNSTVVPVASSQPEIGISPFAPRSSLPVKFVP
YSNLIAGNGGSGSQYSQPIIGHMASRLQPVRYAGQYQPVQAGPAYVHPNSQAVMVGRLGQ
LVYVHPVSYDVVPGAAAISQLSARPLLTPNQVQFPKHQGSVPSQALQLCVPPPVLANGQQ
PFAVPSHIPLVQPPFPANRPIPVPGSNALFNTKFP

Transcript Sequence

Transcript ID

VIT_19s0090g00300.t01
Transcript Infomation

cdna chromosome:12X:19:6436194:6451813:1 gene:VIT_19s0090g00300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACTGCATGAGGTTGGGTAAGAGGTGAAACGACGCCGTACCGACCACAGCTTCCTCGTATC
GTCTTCGTCACATCAGATCTCTTCTGCAAAGCCTCCGAAATCGAGGTCATCCGGTCGACG
GGGTTTAAAAAAGAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAATC
GTCGACAACAGAGATGGGTGCCAGAGCCAGAGAGTTCTCCGACGATGGCGTTTCGCCATC
TCTGAGCCAAGCGTTAGTGTTCGCCACCATGTGCATTATTGGCCTCCCCGTCGAGGTTCA
CGTCAAGGACGGCTCGGTGTACTCAGGAATCCTCCACACGGCTTGTCTCGGGAAGGACTA
CGGAATAATTTTGAAGAAAGCAAGGATGATCAAGAAGGGGAAACTTGAGGCAAATGTGGC
ACATGGTGGCATGGTAGAAACTCTTGTAATCCTGACAGGAGATCTTGTTCAAGTTGTTGC
CAAGGGAGTCCAGCTTTCGGATGATGATATTGTTAGAAACATAACTGGCGAGGATACAGA
AGCTGTTGCAGGCACCATTCCTTCTTTTGAATGTCTAGGGACTGAGGCAAAAATGTTGAA
ACCTGGTAATGCTGCTGTGCATAAGAAGCAAATTAACAACACAAGGAATTCAGTCCAAAA
TGAAAATGGGTTTGCTCATGGTTTTATGGCAACACCCTCTGAGGATAACTTGATGAGCAA
AATTGTGGAGCATGAAGTGAGAAGGAAGGAACCAAGTTATTTGGGTAGTGCCTTGGAAAT
TGAAAATGGAAAAAGAGATTCCAAAATTTTAGCTAAGAGTGAAGAAGCTCCCAGCTTCCC
AGACAATGGGAGACAGGTTGGAGATGATAGGATTCAAGGAAAGCAGGATCATTCCAAACA
AAAATATGAGTTTCATCGCAAAGAAACTGCTCATGAAATTCAAGGCTCAAGTTCAAGCTC
GGATGCTTGCATCACCCATATGAAACCTGTTGAGGCAATAGATGGCAAGATGGCATCTGA
GCTTTTACCAAATGGAGTATCACATGATGGTCCTGCTCCTTCATGTGTCAAACCCAACAA
AAGTTGTTCTGAGAGGGCCAGTGCAGCAGTCATGGATGATATTTCTACAGGTGTTTCAAC
TTCTTCCAATTCGGTTGTGGGTGTTACCTCTGTATCATGTCCTACTTCCTTGGCAACTCC
AACTGAGATGGTCCTCCCTCGTAGTTCAATTTCTAATAAAAGTGCTAAGGAATCCAAGCT
CAATCCTGGAGCAAAAGTCTTCTCTCCTTCATTTACACATCCTAGATCAGTTACTCCTCC
GGCAGTTCCTGCAGTTGCAAGTGTGGCTTATGTACCAAACAATTCAACTGTGGTTCCTGT
TGCTTCTTCACAGCCAGAAATTGGAATTAGCCCTTTTGCACCTCGTTCATCTCTGCCTGT
CAAGTTTGTTCCATACAGCAACCTGATAGCTGGAAACGGTGGCAGTGGTTCTCAATATTC
ACAACCTATTATTGGGCATATGGCAAGCAGGCTGCAGCCGGTTAGATATGCTGGTCAGTA
TCAGCCTGTACAAGCTGGACCTGCTTATGTACATCCAAATTCTCAAGCTGTTATGGTTGG
ACGGTTGGGGCAGCTTGTCTATGTGCATCCAGTTTCATATGATGTGGTTCCGGGTGCAGC
AGCTATCTCACAACTATCTGCACGTCCTCTGTTGACGCCAAATCAGGTCCAATTTCCAAA
GCACCAAGGAAGTGTACCATCCCAAGCACTGCAACTTTGTGTGCCTCCACCCGTTTTAGC
TAATGGACAGCAGCCATTTGCAGTGCCAAGTCACATCCCTCTAGTCCAACCTCCTTTCCC
TGCTAACCGCCCTATCCCAGTCCCAGGATCTAATGCTCTCTTCAATACTAAGTTTCCATG
AGATGTTTCTTCTACTATTACCATTGGCAAACCTAGGGTTTTGTTCTTTTCAAAACCTTT
TCCACAAAATTTTGTCTTATAATCGGTTATTTTTGCATAAGCTGAGTTCTAATCGTATTC
ATAGATGTTTTTGTCATTATACGTGAGAAGTAAAATCTCTTGTGCGAAGGGTTAAATGCT
GTGAAGCCTCGTTCACGAGGAAGCAATGTTT