Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0090g00070.t01
CDS Infomation

cds chromosome:12X:19:6254801:6263640:1 gene:VIT_19s0090g00070 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein [Source:UniProtKB/TrEMBL;Acc:D7T897]
Sequence

ATGAGACGACGACCTGGAATTGGCGGTTTACAGACCGCTGCTGCCACTAGGGATCAGTAT
CGGTTGCTCGGAGAAAATGTAGCGAAGATACGAACAGATCTCATGAAGGAGCAACTCACC
ACGTTTCGATCTCAGTTGGAAGATTTTGCTCGCAAACACAAGAATGACATTCGCAAGAAC
CCTGCTTTCAGATCACAGTTCCATGAGATGTGTGCTAAAGTAGGAGTAGACCCCTTGGCA
TCGAATAAGGGATTTTGGGCAGAGCTATTAGGAATTGGTGACTTCTATTATGAACTTGGT
GTGCAAATTGTTGACATATGCTTAGCGACAAGAGTTCACAATGGAGGTTTGATCGACTTG
CAGGAACTGTGCAATTTGCTTTGCCAGAGACGTAAAAGTGCTCATGGAGCTGTATCTGAA
GATGACTGCTTGCGTGCCATAAGTAAGCTGAAGGTATTGGGTAGTGGTTTTGAGGTGATA
TCTGTTGGAAAGCGAAAGCTTGTTAGGTCTGTCCCTACAGAGTTGAACAAAGACCATAAT
GCAATTCTAGAGCTGGCTCAGGCTCAAGGTTTTGTTACTGTTGAAGAGGTGGAAAGACGG
CTCTCCTGGCCCTCTGGGCGCGCCACTGATGCCCTTGAAACTTTATTGGACGAAGGTCTT
GCAATGATTGATGATGGTCACAGAGATGGCAAACGCCGGTACTGGTTTCCCTGTGCATCT
TCACTCTCTGCTGTAGGAGCTGATATTCTCAAGATTTGA

Peptide Sequence

PEP ID

VIT_19s0090g00070.t01
PEP Infomation

pep chromosome:12X:19:6254801:6263640:1 gene:VIT_19s0090g00070 transcript:VIT_19s0090g00070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein [Source:UniProtKB/TrEMBL;Acc:D7T897]
Sequence

MRRRPGIGGLQTAAATRDQYRLLGENVAKIRTDLMKEQLTTFRSQLEDFARKHKNDIRKN
PAFRSQFHEMCAKVGVDPLASNKGFWAELLGIGDFYYELGVQIVDICLATRVHNGGLIDL
QELCNLLCQRRKSAHGAVSEDDCLRAISKLKVLGSGFEVISVGKRKLVRSVPTELNKDHN
AILELAQAQGFVTVEEVERRLSWPSGRATDALETLLDEGLAMIDDGHRDGKRRYWFPCAS
SLSAVGADILKI

Transcript Sequence

Transcript ID

VIT_19s0090g00070.t01
Transcript Infomation

cdna chromosome:12X:19:6254801:6263640:1 gene:VIT_19s0090g00070 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein [Source:UniProtKB/TrEMBL;Acc:D7T897]
Sequence

ATCGAGGATGAGACGACGACCTGGAATTGGCGGTTTACAGACCGCTGCTGCCACTAGGGA
TCAGTATCGGTTGCTCGGAGAAAATGTAGCGAAGATACGAACAGATCTCATGAAGGAGCA
ACTCACCACGTTTCGATCTCAGTTGGAAGATTTTGCTCGCAAACACAAGAATGACATTCG
CAAGAACCCTGCTTTCAGATCACAGTTCCATGAGATGTGTGCTAAAGTAGGAGTAGACCC
CTTGGCATCGAATAAGGGATTTTGGGCAGAGCTATTAGGAATTGGTGACTTCTATTATGA
ACTTGGTGTGCAAATTGTTGACATATGCTTAGCGACAAGAGTTCACAATGGAGGTTTGAT
CGACTTGCAGGAACTGTGCAATTTGCTTTGCCAGAGACGTAAAAGTGCTCATGGAGCTGT
ATCTGAAGATGACTGCTTGCGTGCCATAAGTAAGCTGAAGGTATTGGGTAGTGGTTTTGA
GGTGATATCTGTTGGAAAGCGAAAGCTTGTTAGGTCTGTCCCTACAGAGTTGAACAAAGA
CCATAATGCAATTCTAGAGCTGGCTCAGGCTCAAGGTTTTGTTACTGTTGAAGAGGTGGA
AAGACGGCTCTCCTGGCCCTCTGGGCGCGCCACTGATGCCCTTGAAACTTTATTGGACGA
AGGTCTTGCAATGATTGATGATGGTCACAGAGATGGCAAACGCCGGTACTGGTTTCCCTG
TGCATCTTCACTCTCTGCTGTAGGAGCTGATATTCTCAAGATTTGATTTTTCAGCACCAT
GTTTTCTGCCCTGGGCATTGTCTGGTAAAAGGGTGTTTATGAGATAGGTCTAGCATTGGA
ATCCAGTATTTTTGTTTATTTATCAGGAAAAAAATGCAAAAAATAAAAATAAAAACCCCA
TTTGTGATATAGACATTTGATGGGGGACCTGAAAGGAAAAAAAGGGTGTTTGTTCCACCC
CACAACCCCGCTCCACCACTTTGTTTTCCTTGTAACTAATGTTTCATCTTTTTAAAGACG
TGATTGTCAGAACATGAA