Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0085g00890.t01
CDS Infomation

cds chromosome:12X:19:23388130:23390219:1 gene:VIT_19s0085g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCCATCACAAGAAGCCTTCTACTATGAATTCTCACGATAGACCCATGTGTGTTCAA
GGTGACTCTGGCCTTGTCCTCACCACCGACCCAAAGCCCCGCCTCCGGTGGACTGTTGAG
CTCCATGAACGCTTTGTTGATGCTGTCACTCAGCTTGGAGGACCTGATAAGGCCACCCCG
AAGACCATCATGAGAGTCATGGGTGTAAAAGGTCTCACTCTTTACCATCTCAAGAGCCAT
CTCCAGAAATTCAGGCTTGGAAAGCAGCCACACAAGGAATTCAATGATCACTCAATTAAG
GATGCTTCAGCATTAGAACTTCAAAGAAACATTGCATCTTCATCTGGGGTGATGAGCCGC
AATACCAACGAGATGCAAATGGAGGTGCAAAGAAGGCTTCACGAACAACTGGAGGTCCAA
AGACACCTCCAGTTGAGAATTGAAGCTCAAGGGAAGTACATGCAGACTATACTGGAGAAA
GCTTGCCAGACACTTGCAGGTGAAAACATGGCTTTGGGAAACTACAAGGGTATCGGAAAT
CAAGGAGTTCCTGACATGGGAGCGATGAAGGATTTCGGTTCTTCCTTGAACTTTCCATCT
CTTCAAGACCTAAACATTTATGGAGGTGACCAGCTTGACCTTCAACAAAGCATGGACAGA
TCACTTGATGGCTTCATACAGAATACTGAGAACATGTGTTTGGGAAAGAAGAGGCCTAGC
CCTTATAGTGGTAGTGGCAAGAACCCTCTAATCTGGTCTGATGATCTTCGGATGCAAGAA
CTGGGAACAGCAGCATCCTGTCTAGGCTCTCAAGATGATCCATTCAAGGGTGATCAAATT
CAAATTGCACCACCATCAATGGATAGAGGAGCTGATATGGATTCCATATCCGACATTTAT
GAAACAAAGCCAATTCTCTCTGGTGATCCTATGGGAGAAAAGAAATTTGATGGGTCGGGG
TCGGCAAAGCTTGGAAGGCCATCGCCACGTAGAGCACCACTTCCCACAGATAGGATGAAT
CCCATGATCAATGCTGGTGCCATGCCACAAGGAAGAAGTTCATACGGGTGA

Peptide Sequence

PEP ID

VIT_19s0085g00890.t01
PEP Infomation

pep chromosome:12X:19:23388130:23390219:1 gene:VIT_19s0085g00890 transcript:VIT_19s0085g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFHHKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP
KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNIASSSGVMSR
NTNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQTILEKACQTLAGENMALGNYKGIGN
QGVPDMGAMKDFGSSLNFPSLQDLNIYGGDQLDLQQSMDRSLDGFIQNTENMCLGKKRPS
PYSGSGKNPLIWSDDLRMQELGTAASCLGSQDDPFKGDQIQIAPPSMDRGADMDSISDIY
ETKPILSGDPMGEKKFDGSGSAKLGRPSPRRAPLPTDRMNPMINAGAMPQGRSSYG

Transcript Sequence

Transcript ID

VIT_19s0085g00890.t01
Transcript Infomation

cdna chromosome:12X:19:23388130:23390219:1 gene:VIT_19s0085g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTAATATTGTGGAGATTTTCTTTTCTACAGGGCTGGCTTGTCCCCCCGTACTTTCTATTT
GAGAAATCAAAGCCAAACTCTTCTTCAAAAACGCACCCTATTCTTCCCTATTTGCATCGC
ATTTGTTCTTGAATCTCTTCCTATTCCAGAGCAGCTGAGAGAGAGATAGAGAATGTTCCA
TCACAAGAAGCCTTCTACTATGAATTCTCACGATAGACCCATGTGTGTTCAAGGTGACTC
TGGCCTTGTCCTCACCACCGACCCAAAGCCCCGCCTCCGGTGGACTGTTGAGCTCCATGA
ACGCTTTGTTGATGCTGTCACTCAGCTTGGAGGACCTGATAAGGCCACCCCGAAGACCAT
CATGAGAGTCATGGGTGTAAAAGGTCTCACTCTTTACCATCTCAAGAGCCATCTCCAGAA
ATTCAGGCTTGGAAAGCAGCCACACAAGGAATTCAATGATCACTCAATTAAGGATGCTTC
AGCATTAGAACTTCAAAGAAACATTGCATCTTCATCTGGGGTGATGAGCCGCAATACCAA
CGAGATGCAAATGGAGGTGCAAAGAAGGCTTCACGAACAACTGGAGGTCCAAAGACACCT
CCAGTTGAGAATTGAAGCTCAAGGGAAGTACATGCAGACTATACTGGAGAAAGCTTGCCA
GACACTTGCAGGTGAAAACATGGCTTTGGGAAACTACAAGGGTATCGGAAATCAAGGAGT
TCCTGACATGGGAGCGATGAAGGATTTCGGTTCTTCCTTGAACTTTCCATCTCTTCAAGA
CCTAAACATTTATGGAGGTGACCAGCTTGACCTTCAACAAAGCATGGACAGATCACTTGA
TGGCTTCATACAGAATACTGAGAACATGTGTTTGGGAAAGAAGAGGCCTAGCCCTTATAG
TGGTAGTGGCAAGAACCCTCTAATCTGGTCTGATGATCTTCGGATGCAAGAACTGGGAAC
AGCAGCATCCTGTCTAGGCTCTCAAGATGATCCATTCAAGGGTGATCAAATTCAAATTGC
ACCACCATCAATGGATAGAGGAGCTGATATGGATTCCATATCCGACATTTATGAAACAAA
GCCAATTCTCTCTGGTGATCCTATGGGAGAAAAGAAATTTGATGGGTCGGGGTCGGCAAA
GCTTGGAAGGCCATCGCCACGTAGAGCACCACTTCCCACAGATAGGATGAATCCCATGAT
CAATGCTGGTGCCATGCCACAAGGAAGAAGTTCATACGGGTGAGGCCAAATTACATATTA
GATCTAAGTGACCTGAACTATGAGATTTAGGGTTTTGGTCTTGAAGGCTAGCATTTCACA
TTAGGGTTTCCGCTCAAATCTGGTATAAAGCCATGCATGGCAGACTTTCAGGTAGAATGT
AATCTAACTAGTACAATTATAACTTTATTATGCTCTTACTACTTG