Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0085g00840.t01
CDS Infomation

cds chromosome:12X:19:23305999:23313344:1 gene:VIT_19s0085g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGCAACTCGCATGATGAAGTCCCTCTGTCTGCAGTCACTGCCGCCCACCACCCTT
CAAGAAATTGCTTCTAATCACCACAAGGGTCTTGCAAAGGTTGTCCTGAAAAAGGGGAAG
ACGCAACTTTTTAGGGATGGAAGTCCTATGGTTTATAGCGGGGCAGTTGATAGAATTATT
GGGAGGCCACCACCCAGAACTGGAGATGTCGTGGTGGTAGCTGATGGAACAGAGAAACCA
ATAGGGTGGGGCTTATACAATTCAGTTTCTATGTTCTGTGTTAGGCTCATGCAACAAGAA
GAGGAAGCAACAAGAGACCCGTCTTGTGCATTGAACATGGAGAAACTGCTTGAAACAAGA
ATCGATGCAGCTATAGAACTACGTAGGAATTTGGGCCTTCCTTCTGCCAATACAAATGCA
TACCGTCTTGTGAATAGTGAAGGAGACAGGTTGTCAGGACTAATTGTTGATGTCTTTGGA
GATTTAGCTGTAATAGCATCATCTGCGGCTTGGGTTGAGAAGTACAAGCCTCAAGTAGAG
GCTTGCATTAGTAGAATTGATGAAATTAATCATATAAACTGGAGGCAGTCTGTGGAAATG
TTAAAAGAAGAAGGATTGGATTTAACAGATCTGAAGGGAATACATCTGCCTACTTCTCAT
CAGAGGGTAAAGGTTATTGAAAATGGGATTTCTTATGCAATCTCGCCAGAGGGCCAAAAG
ACAGGATTTTATGCTGATCAGCGTGAAAACCGTCATTTTATATCAACAATTTCAGAAGGT
CAAAGAGTTCTTGACATGTGCTGCTATAGTGGTGGTTTTGCTCTGAATGCAGTATGTGGT
GGTGCCGTAAATGTCACTGGGGTTGATACGTCGATGCCTGCTCTGGAGCTTGCCAATGAA
AATATCATTCTCAACAACTTGGATCCAGGGAAAATATCATTTTTGAGACGAGATGCCACC
GAGTTTATGAAGGATGCTGTTGCTAGGAATGAATCATGGGATATAGTTATTCTGGATCCC
CCTAAACTAGCACCTCGACGAAAGGTTCTACAAAGCGCATCCGGCATGTACAGAAATCTA
AACTCGTTAGCCATGCAATTGACGAGGAGAGGCGGTCTTCTCATGACTTGTTCTTGCTCA
GGAGCAATGACCCAAAGTGGAACATTCATGCGTATTCTTCAGGCAACTGCATCAATGGCT
GGAAGGAAAATCACCCTTCTACGGCAGGCAGGAGCAGCTTGTGACCATCCTATTGATCCA
TCCTACCCAGAAGGGGCATACCTTTCCAACATTCTTTTTAGGGTACTCTGA

Peptide Sequence

PEP ID

VIT_19s0085g00840.t01
PEP Infomation

pep chromosome:12X:19:23305999:23313344:1 gene:VIT_19s0085g00840 transcript:VIT_19s0085g00840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVATRMMKSLCLQSLPPTTLQEIASNHHKGLAKVVLKKGKTQLFRDGSPMVYSGAVDRII
GRPPPRTGDVVVVADGTEKPIGWGLYNSVSMFCVRLMQQEEEATRDPSCALNMEKLLETR
IDAAIELRRNLGLPSANTNAYRLVNSEGDRLSGLIVDVFGDLAVIASSAAWVEKYKPQVE
ACISRIDEINHINWRQSVEMLKEEGLDLTDLKGIHLPTSHQRVKVIENGISYAISPEGQK
TGFYADQRENRHFISTISEGQRVLDMCCYSGGFALNAVCGGAVNVTGVDTSMPALELANE
NIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDPPKLAPRRKVLQSASGMYRNL
NSLAMQLTRRGGLLMTCSCSGAMTQSGTFMRILQATASMAGRKITLLRQAGAACDHPIDP
SYPEGAYLSNILFRVL

Transcript Sequence

Transcript ID

VIT_19s0085g00840.t01
Transcript Infomation

cdna chromosome:12X:19:23305999:23313344:1 gene:VIT_19s0085g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCGAAAACATGGTTGCAACTCGCATGATGAAGTCCCTCTGTCTGCAGTCACTGCCGCCC
ACCACCCTTCAAGAAATTGCTTCTAATCACCACAAGGGTCTTGCAAAGGTTGTCCTGAAA
AAGGGGAAGACGCAACTTTTTAGGGATGGAAGTCCTATGGTTTATAGCGGGGCAGTTGAT
AGAATTATTGGGAGGCCACCACCCAGAACTGGAGATGTCGTGGTGGTAGCTGATGGAACA
GAGAAACCAATAGGGTGGGGCTTATACAATTCAGTTTCTATGTTCTGTGTTAGGCTCATG
CAACAAGAAGAGGAAGCAACAAGAGACCCGTCTTGTGCATTGAACATGGAGAAACTGCTT
GAAACAAGAATCGATGCAGCTATAGAACTACGTAGGAATTTGGGCCTTCCTTCTGCCAAT
ACAAATGCATACCGTCTTGTGAATAGTGAAGGAGACAGGTTGTCAGGACTAATTGTTGAT
GTCTTTGGAGATTTAGCTGTAATAGCATCATCTGCGGCTTGGGTTGAGAAGTACAAGCCT
CAAGTAGAGGCTTGCATTAGTAGAATTGATGAAATTAATCATATAAACTGGAGGCAGTCT
GTGGAAATGTTAAAAGAAGAAGGATTGGATTTAACAGATCTGAAGGGAATACATCTGCCT
ACTTCTCATCAGAGGGTAAAGGTTATTGAAAATGGGATTTCTTATGCAATCTCGCCAGAG
GGCCAAAAGACAGGATTTTATGCTGATCAGCGTGAAAACCGTCATTTTATATCAACAATT
TCAGAAGGTCAAAGAGTTCTTGACATGTGCTGCTATAGTGGTGGTTTTGCTCTGAATGCA
GTATGTGGTGGTGCCGTAAATGTCACTGGGGTTGATACGTCGATGCCTGCTCTGGAGCTT
GCCAATGAAAATATCATTCTCAACAACTTGGATCCAGGGAAAATATCATTTTTGAGACGA
GATGCCACCGAGTTTATGAAGGATGCTGTTGCTAGGAATGAATCATGGGATATAGTTATT
CTGGATCCCCCTAAACTAGCACCTCGACGAAAGGTTCTACAAAGCGCATCCGGCATGTAC
AGAAATCTAAACTCGTTAGCCATGCAATTGACGAGGAGAGGCGGTCTTCTCATGACTTGT
TCTTGCTCAGGAGCAATGACCCAAAGTGGAACATTCATGCGTATTCTTCAGGCAACTGCA
TCAATGGCTGGAAGGAAAATCACCCTTCTACGGCAGGCAGGAGCAGCTTGTGACCATCCT
ATTGATCCATCCTACCCAGAAGGGGCATACCTTTCCAACATTCTTTTTAGGGTACTCTGA
AACTTGTCATCATGAATGAATATGAATATGAATATGAAAACAAACACAAGTTTTGATACA
GACATTGAAGAAAAATGGGAAGCCATTAGAG