Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_19s0085g00830.t01
CDS Infomation

cds chromosome:12X:19:23283471:23291087:-1 gene:VIT_19s0085g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGTGTGGTATCTGTCATTTTCCCTCGGCCCCGGAGGACTGTGAAATCTTTCTCTCT
GCTATTCTTTTCTGCACACTTGGTAAAACGACAGCAATGGCCCTCTACAGCTCCAACAGT
CTTCTTCTTCTTCTTCACCACAAACCCAAGAGCAGCTGCGTCACTGCACCCATATCAGCT
TCTCTTAGTCCTGGACTAAAGACTTGGACAGAAGGCAATCATGTTGGTCTGGGCTTTGAA
GGGACCAAGGAAAGAATCAAGAAGATGTTTGACAAGGTTGAGCTTTCGGTATCTTCATAT
GACACAGCTTGGGTTGCTATGGTCCCTTCTCCATATTCCTCACAGGCCCCATACTTCCCG
GAGTGTGTGAATTGGTTATTGGAAAATCAGTCTCATGATGGCTCATGGGGTCTTCCTCAT
CCCCATCCCATGTTAGTCAAAGATGCTCTTTCATCTACTTTGGCATCTGTCCTTGCACTC
AAGCGATGGGGTGTTGGTGAAGAGCAAAGGAACAAGGGGCTCTGGTTTATTGCATCCAAT
TTTGCTTCAGTTAGCGATGAGAAACAACATTCTCCAATTGGATTCGATATAATATTTCCT
GGTATGATTGAGTATGCCAAAGAATTAGATTTGAACCTCCCTTTGGGGCAAAGAGATGTA
GATGCTATGCTTCAGAAGAGGGATTTGGAGCTCAAAGGAAGCTTGGGAAGCAACACTAAG
AGCAGAGAAGCCTACTTAGCATATATTTCGGAAGGAATGGGAAGGTTACAAGACTGGGAA
ATGGTTATGAAATATCAGATGAAGAATGGGTCTCTGCTCAATTCACCTTCTGCCACAGCA
GCTGCTCTTTCTCACCTTCAAAATGCGGGTTGTCTGAATTACCTTCGATCTCTTTTAGAG
AAGTTTGGGAATGCAGTCCCAACAGTGTATCCTCTAGATTTATATGCTCGTTTATGTTTG
GTTGACAATCTTGAAAGGTTGGGAATTGATCGGTATTTTAGGATGGAGATCAGAAGTGTA
TTGGATGAAACATACAGATGCTGGCTGCAGAGGGAGGAAGAGATATTTGCAGACAGAGCC
ACCTGTGCAATCGCATTTCGGATACTACGTTTAAATGGATATGACATCTCTTCAGTTCCA
TTAGCTCAATTTGCTGAAGACGATCAGTATTTCAAGTTTGGACAAGATTTTAAGGACTTG
GGGGCTGCCCTTGAATTATTTAGGGCTTCAGAGATGATTATACACCCAGATGAAGTGGTT
CTGGAGAAACAAAACTCATGGTCAAGTCATTTTCTAAGACAGGGACTATCGAACAGTTCA
ATTCATGCAGATAGACTCAATAAGTACATTGCCCAAGAGGTGGAGGATGCTCTTAGGTTT
CCCTACTACGCAAATTTGGATCGCATAGCAAACAGAAGAAGTATTGAGCATTATAATGTA
GATGATACAAGGATATTAAAAACTGCATATCGCTCTTCACATGTCTGCAACAAAGATTTC
CTAAAACTAGCAGTTGAAGACTTCAATTTCTGTCAATCAATACACCAAAACGAACTCAAA
CAACTTGAGAGGTGGATTATAGAGAACAGATTAGACAAGCTAAAGTTTGCGAGGCAGAAG
CTGGCCTACTGTTACTTCTCTGCTGCAGCAACCATATTCTCTCCTGAACAATCTGATGCC
CGCCTTTCGTGGGCCAAAAACAGTGTTCTCACAACTGTGGTTGATGACTTCTTTGACATT
GGAGGCTCTGAAGAGGAGCTCCTAAACCTTATTCAACTGGTTGAGAAGTGGGATATAGAT
GTAGCCGTGGATTGTTGTTCTGAACAAGTTGAGATCGTTTTTTCAGCACTCCACAGCACA
ATATCTGAGATTGGAGTCAAAGCATCAGCATGGCAAGCCCGTAACGTGACCAGCCATATA
ATTGATATCTGGCTGAAGTTGCTAAGATCTATGTTACAAGAAGCTCAGTGGGTGAGTAAT
AAATCAGCTCCAACAATGGATGAATACATGACAAATGCATATGTATCCTTTGCTCTGGGA
CCAATTGTCCTCCCGGCGCTCTATTTTGTTGGTCCTAAGCTTTCAGAGGAGGTTGTTGAG
GGACCTGAGTGCCATAAACTATATAAGCTTATGAGCACCTGTGGGCGTCTTTTGAATGAT
ATCCACAGCTTTAAGAGGGAGTCCAAGGAAGGGAAAGCGAATGCTCTAGCACTACACATG
ATACATGGCAATGGTGTCACTACTGAAGAACAGGCCATCAGAGAGATGAAGGGTTTAGTT
AAGAGTCAGAGGAGAGAACTTCAGAGATTAGTTCTACAGGAGAAGGGTAGCACAGTACCA
AGAATTTGCAAGGATTTATTTTGGAAAATGAGCAAAGTGTTGCACACATTTTATGAGAAA
GACGATGGATTCACTTCACATGACATGCTCCGTGCTGTGAAATCAGTCATTTATGAACCT
GTTCTTCTTGCTGAATTCTAA

Peptide Sequence

PEP ID

VIT_19s0085g00830.t01
PEP Infomation

pep chromosome:12X:19:23283471:23291087:-1 gene:VIT_19s0085g00830 transcript:VIT_19s0085g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVCGICHFPSAPEDCEIFLSAILFCTLGKTTAMALYSSNSLLLLLHHKPKSSCVTAPISA
SLSPGLKTWTEGNHVGLGFEGTKERIKKMFDKVELSVSSYDTAWVAMVPSPYSSQAPYFP
ECVNWLLENQSHDGSWGLPHPHPMLVKDALSSTLASVLALKRWGVGEEQRNKGLWFIASN
FASVSDEKQHSPIGFDIIFPGMIEYAKELDLNLPLGQRDVDAMLQKRDLELKGSLGSNTK
SREAYLAYISEGMGRLQDWEMVMKYQMKNGSLLNSPSATAAALSHLQNAGCLNYLRSLLE
KFGNAVPTVYPLDLYARLCLVDNLERLGIDRYFRMEIRSVLDETYRCWLQREEEIFADRA
TCAIAFRILRLNGYDISSVPLAQFAEDDQYFKFGQDFKDLGAALELFRASEMIIHPDEVV
LEKQNSWSSHFLRQGLSNSSIHADRLNKYIAQEVEDALRFPYYANLDRIANRRSIEHYNV
DDTRILKTAYRSSHVCNKDFLKLAVEDFNFCQSIHQNELKQLERWIIENRLDKLKFARQK
LAYCYFSAAATIFSPEQSDARLSWAKNSVLTTVVDDFFDIGGSEEELLNLIQLVEKWDID
VAVDCCSEQVEIVFSALHSTISEIGVKASAWQARNVTSHIIDIWLKLLRSMLQEAQWVSN
KSAPTMDEYMTNAYVSFALGPIVLPALYFVGPKLSEEVVEGPECHKLYKLMSTCGRLLND
IHSFKRESKEGKANALALHMIHGNGVTTEEQAIREMKGLVKSQRRELQRLVLQEKGSTVP
RICKDLFWKMSKVLHTFYEKDDGFTSHDMLRAVKSVIYEPVLLAEF

Transcript Sequence

Transcript ID

VIT_19s0085g00830.t01
Transcript Infomation

cdna chromosome:12X:19:23283471:23291087:-1 gene:VIT_19s0085g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAATATATGGTGTGTGGTATCTGTCATTTTCCCTCGGCCCCGGAGGACTGTGAAATCTT
TCTCTCTGCTATTCTTTTCTGCACACTTGGTAAAACGACAGCAATGGCCCTCTACAGCTC
CAACAGTCTTCTTCTTCTTCTTCACCACAAACCCAAGAGCAGCTGCGTCACTGCACCCAT
ATCAGCTTCTCTTAGTCCTGGACTAAAGACTTGGACAGAAGGCAATCATGTTGGTCTGGG
CTTTGAAGGGACCAAGGAAAGAATCAAGAAGATGTTTGACAAGGTTGAGCTTTCGGTATC
TTCATATGACACAGCTTGGGTTGCTATGGTCCCTTCTCCATATTCCTCACAGGCCCCATA
CTTCCCGGAGTGTGTGAATTGGTTATTGGAAAATCAGTCTCATGATGGCTCATGGGGTCT
TCCTCATCCCCATCCCATGTTAGTCAAAGATGCTCTTTCATCTACTTTGGCATCTGTCCT
TGCACTCAAGCGATGGGGTGTTGGTGAAGAGCAAAGGAACAAGGGGCTCTGGTTTATTGC
ATCCAATTTTGCTTCAGTTAGCGATGAGAAACAACATTCTCCAATTGGATTCGATATAAT
ATTTCCTGGTATGATTGAGTATGCCAAAGAATTAGATTTGAACCTCCCTTTGGGGCAAAG
AGATGTAGATGCTATGCTTCAGAAGAGGGATTTGGAGCTCAAAGGAAGCTTGGGAAGCAA
CACTAAGAGCAGAGAAGCCTACTTAGCATATATTTCGGAAGGAATGGGAAGGTTACAAGA
CTGGGAAATGGTTATGAAATATCAGATGAAGAATGGGTCTCTGCTCAATTCACCTTCTGC
CACAGCAGCTGCTCTTTCTCACCTTCAAAATGCGGGTTGTCTGAATTACCTTCGATCTCT
TTTAGAGAAGTTTGGGAATGCAGTCCCAACAGTGTATCCTCTAGATTTATATGCTCGTTT
ATGTTTGGTTGACAATCTTGAAAGGTTGGGAATTGATCGGTATTTTAGGATGGAGATCAG
AAGTGTATTGGATGAAACATACAGATGCTGGCTGCAGAGGGAGGAAGAGATATTTGCAGA
CAGAGCCACCTGTGCAATCGCATTTCGGATACTACGTTTAAATGGATATGACATCTCTTC
AGTTCCATTAGCTCAATTTGCTGAAGACGATCAGTATTTCAAGTTTGGACAAGATTTTAA
GGACTTGGGGGCTGCCCTTGAATTATTTAGGGCTTCAGAGATGATTATACACCCAGATGA
AGTGGTTCTGGAGAAACAAAACTCATGGTCAAGTCATTTTCTAAGACAGGGACTATCGAA
CAGTTCAATTCATGCAGATAGACTCAATAAGTACATTGCCCAAGAGGTGGAGGATGCTCT
TAGGTTTCCCTACTACGCAAATTTGGATCGCATAGCAAACAGAAGAAGTATTGAGCATTA
TAATGTAGATGATACAAGGATATTAAAAACTGCATATCGCTCTTCACATGTCTGCAACAA
AGATTTCCTAAAACTAGCAGTTGAAGACTTCAATTTCTGTCAATCAATACACCAAAACGA
ACTCAAACAACTTGAGAGGTGGATTATAGAGAACAGATTAGACAAGCTAAAGTTTGCGAG
GCAGAAGCTGGCCTACTGTTACTTCTCTGCTGCAGCAACCATATTCTCTCCTGAACAATC
TGATGCCCGCCTTTCGTGGGCCAAAAACAGTGTTCTCACAACTGTGGTTGATGACTTCTT
TGACATTGGAGGCTCTGAAGAGGAGCTCCTAAACCTTATTCAACTGGTTGAGAAGTGGGA
TATAGATGTAGCCGTGGATTGTTGTTCTGAACAAGTTGAGATCGTTTTTTCAGCACTCCA
CAGCACAATATCTGAGATTGGAGTCAAAGCATCAGCATGGCAAGCCCGTAACGTGACCAG
CCATATAATTGATATCTGGCTGAAGTTGCTAAGATCTATGTTACAAGAAGCTCAGTGGGT
GAGTAATAAATCAGCTCCAACAATGGATGAATACATGACAAATGCATATGTATCCTTTGC
TCTGGGACCAATTGTCCTCCCGGCGCTCTATTTTGTTGGTCCTAAGCTTTCAGAGGAGGT
TGTTGAGGGACCTGAGTGCCATAAACTATATAAGCTTATGAGCACCTGTGGGCGTCTTTT
GAATGATATCCACAGCTTTAAGAGGGAGTCCAAGGAAGGGAAAGCGAATGCTCTAGCACT
ACACATGATACATGGCAATGGTGTCACTACTGAAGAACAGGCCATCAGAGAGATGAAGGG
TTTAGTTAAGAGTCAGAGGAGAGAACTTCAGAGATTAGTTCTACAGGAGAAGGGTAGCAC
AGTACCAAGAATTTGCAAGGATTTATTTTGGAAAATGAGCAAAGTGTTGCACACATTTTA
TGAGAAAGACGATGGATTCACTTCACATGACATGCTCCGTGCTGTGAAATCAGTCATTTA
TGAACCTGTTCTTCTTGCTGAATTCTAAGTATAAGAAGTGCAAAACATGTTAAAACTAAA
CAAAGTATCTCAAGAAGAATTCGGATAAATATTCCTGACCAGGACTCCATCGCCCTGTGG
GGCAAGTTACTTTTCTTCCACATCAAATACAAGAATACATTAAAATGAAAACGAATTATA
CAAGGAAGCTCTCCAAAGTGAATGCCCCAGCTCTGGTTAACTTGATTGTTGCTCATGCTA
TATTATCATATTTCAACCCTGAATAGACTTCAAAGTTAATTTACCAGGAGAAAAGCAGCC
GAAGTGTTGCTTGATAGTTTGAGAGA